Aktuelle wissenschaftliche Publikationen

2020

Andersen, T. G. (2020). How to catch the N - An inter-species exchange with the right chemistry. Molecular Systems Biology 16: e9514. doi:10.15252/msb.20209514. open access

Andrés Lalaguna, F., Kinoshita, A., Kalluri, N., Fernández, V., Falavigna, VS., Cruz, T MD., Jang, S., Chiba, Y., Seo, M., Mettler-Altmann, T., Huettel, B., Coupland, G. (2020) The sugar transporter SWEET10 acts downstream of FLOWERING LOCUS T during floral transition of Arabidopsis thaliana. BMC Plant Biology 20: 53. doi:10.1186/s12870-020-2266-0.open access

Burchardt, P., Buddenhagen, C. E., Gaeta, M., Souza, M. D., Marques, A., & Vanzela, A. L. L. (2020). Holocentric Karyotype Evolution inRhynchosporaIs Marked by Intense Numerical, Structural, and Genome Size Changes. Frontiers in Plant Science 11: 536507. doi:10.3389/fpls.2020.536507. open access

Cattani, A. M., da Silveira Falavigna, V., Silveira, C. P., Buffon, V., dos Santos Maraschin, F., Pasquali, G., & Revers, L. F. (2020). Type-B cytokinin response regulators link hormonal stimuli and molecular responses during the transition from endo- to ecodormancy in apple buds. Plant Cell Reports, 39(12), 1687-1703. doi:10.1007/s00299-020-02595-z.

Copeland, C. (2020). Starting Off Right: N-Terminal Acetylation Stabilizes an Immune-Activating Protein. Plant Physiology 183, 35-36. doi:10.1104/pp.20.00327. open access

Copeland, C.; Schulze-Lefert, P. (2020) Leaf-derived bacterial communities adapt to the local environment. PNAS 117: doi: 10.1073/pnas.1920431117 (see companion article 10.1073/pnas.1908600116)

Crismani, W., & Mercier, R. (2020). Don't Forget Your Sister: Directing Double-Strand Break Repair at Meiosis. Developmental Cell 53, 374-376. doi:10.1016/j.devcel.2020.04.021.

de Leone, M. J., Esteban Hernando, C., Romanowski, A., Careno, D. A., Faigon Soverna, A., Sun, H.-Q., Bologna, N. G., Vazquez, M., Schneeberger, K., & Yanovsky, M. J. (2020). Bacterial Infection Disrupts Clock Gene Expression to Attenuate Immune Responses. Current Biology 30, 1740-1747.e6. doi:10.1016/j.cub.2020.02.058. open access

Dongus, J. A., Bhandari, D. D., Patel, M., Archer, L., Dijkgraaf, L., Deslandes, L., Shah, J., & Parker, J. E. (2019). Arabidopsis PAD4 lipase-like domain is sufficient for resistance to green peach aphid. Molecular Plant-Microbe Interactions 33: 328-335, doi:10.1094/MPMI-08-19-0245-R.

Flegler, A., Runzheimer, K., Kombeitz, V., Maenz, A. T., Heidler von Heilborn, D., Etzbach, L., Schieber, A., Hoelzl, G., Huettel, B., Woehle, C., & Lipski, A. (2020). Arthrobacter bussei sp. nov., a pink-coloured organism isolated from cheese made of cow's milk. International Journal of Systematic and Evolutionary Microbiology 70, 3027-3036. doi:10.1099/ijsem.0.004125.

Flood, P., Theeuwen, T. P. J. M., Schneeberger, K., Keizer, P., Kruijer, W., Severing, E., Kouklas, E., Hageman, J. A., Wijfjes, R., Calvo-Baltanas, V., Becker, F. F. M., Schnabel, S. K., Willems, L. A. J., Ligterink, W., van Arkel, J., Mumm, R., Gualberto, J. M., Savage, L., Kramer, D. M., Keurentjes, J. J. B., van Eeuwijk, F., Koornneef, M., Harbinson, J., Aarts, M. G. M., & Wijnker, E. (2020). Reciprocal cybrids reveal how organellar genomes affect plant phenotypes. Nature Plants 6, 13-21. doi:10.1038/s41477-019-0575-9.

Gratkowska-Zmuda, D. M., Kubala, S., Sarnowska, E., Cwiek, P., Oksinska, P., Steciuk, J., Rolicka, A. T., Zaborowska, M., Bucior, E., Maassen, A., Franzen, R., Koncz, C., & Sarnowksi, T. J. (2020). The SWI/SNF ATP-Dependent Chromatin Remodeling Complex in Arabidopsis Responds to Environmental Changes in Temperature-Dependent Manner. International Journal of Molecular Sciences, 21: 762. doi:10.3390/ijms21030762. open access

Harbort, C. J., Hashimoto, M., Inoue, H., Niu, Y., Guan, R., Rombolà, A. D., Kopriva, S., Voges, M. J. E. E. E., Sattely, E. S., Garrido-Oter, R., Schulze-Lefert, P. (2020) Root-secreted coumarins and the microbiota interact to improve iron nutrition in Arabidopsis. Cell host & microbe, doi: 10.1016/j.chom.2020.09.006.

Harris, R. B., Irwin, K., Jones, M. R., Laurent, S., Barrett, R. D. H., Nachman, M. W., Good, J., Linnen, C. R., Jensen, J. D., & Pfeifer, S. P. (2020). The population genetics of crypsis in vertebrates: recent insights from mice, hares, and lizards. Heredity; Nature Publishing Group, London, 124, 1-14. doi:10.1038/s41437-019-0257-4. open access

Harvey, S., Kumari, P., Lapin, D., Griebel, T., Hickman, R., Guo, W., Zhang, R., Parker, J., Beynon, J., Denby, K., & Steinbrenner, J. (2020). Downy Mildew effector HaRxL21 interacts with the transcriptional repressor TOPLESS to promote pathogen susceptibility. PLoS Pathogens, 16: e1008835. doi:10.1371/journal.ppat.1008835. open access

Hematy, K.*, Lim, M.*, Cherk, C., Piślewska-Bednarek, M., Sanchez-Rodriguez, C., Stein, M., Fuchs, R., Klapprodt, C., Lipka, V., Molina, A., Grill, E., Schulze-Lefert, P., Bednarek, P., Somerville, S. (2020) Moonlighting function of Phytochelatin synthase1 in extracellular defense against fungal pathogens. Plant Physiology 120: 1-13, doi:10.1104/pp.19.01393. *contributed equally open access

Jiao, W.-B., & Schneeberger, K. (2020). Chromosome-level assemblies of multiple Arabidopsis genomes reveal hotspots of rearrangements with altered evolutionary dynamics. Nature Communications 11: 989. doi:10.1038/s41467-020-14779-y. open access

Kamei, C. L. A., Pieper, B., Laurent, S., Tsiantis, M., & Huijser, P. (2020). CRISPR/Cas9-Mediated Mutagenesis of RCO in Cardamine hirsuta. PLANTS-BASEL, 9: 268. doi:10.3390/plants9020268. open access

Kimura, S., Hunter, K., Vaahtera, L., Tran, H. C., Citterico, M., Vaattovaara, A., Rokka, A., Stolze, S. C., Harzen, A., Meissner, L., Wilkens, M. M. T., Hamann, T., Toyota, M., Nakagami, H., & Wrzaczek, M. (2020). CRK2 and C-terminal Phosphorylation of NADPH Oxidase RBOHD Regulate Reactive Oxygen Species Production in Arabidopsis. The Plant Cell, 32, 1063-1080. doi:10.1105/tpc.19.00525.open access

Koide, E., Suetsugu, N., Iwano, M., Gotoh, E., Nomura, Y., Stolze, S. C., Nakagami, H., Kohchi, T., & Nishihama, R. (2020). Regulation of Photosynthetic Carbohydrate Metabolism by a Rat-Like Kinase in the Liverwort Marchantia polymorpha. Plant and Cell Physiology, 61(3), 631-643. doi:10.1093/pcp/pcz232.open access

Lapin, D., Bhandari,D. D., Parker, J. E. (2020) Origins and Immunity Networking Functions of EDS1 Family Proteins. Annual Review of Phytopathology 58: 253-276, doi: 10.1146/annurev-phyto-010820-012840.

Li, X., Sanagi, M., Lu, Y., Nomura, Y., Stolze, S. C., Yasuda, S., Saijo, Y., Schulze, W., Feil, R., Stitt, M., Lunn, J. E., Nakagami, H., Sato, T., & Yamaguchi, J. (2020). Protein Phosphorylation Dynamics Under Carbon/Nitrogen-Nutrient Stress and Identification of a Cell Death-Related Receptor-Like Kinase in Arabidopsis. Frontiers in Plant Science 11: 377. doi:10.3389/fpls.2020.00377. open access

Madrid, E., Chandler, JW and Coupland, G. (2020) Gene regulatory networks controlled by FLOWERING LOCUS C that confer variation in seasonal flowering and life history, Journal of Experimental Botany, doi:10.1093/jxb/eraa216. open access

Mahdi, L., Huang, M., Zhang, X., Nakano, R. T., Kopp, L. B., Saur, I. M. L., Jacob, F., Kovacova, V., Lapin, D., Parker, J.E., Murphy, J. M., Hofmann, K., Schulze-Lefert, P., Chai, J., Maekawa, T. (2020) Innate immune signalling by plant mixed lineage kinase domain-like proteins. Cell host & microbe, doi 10.1016/j.chom.2020.08.012.

Martens, M., Horres, R., Wendeler, E., & Reiss, B. (2020). The Importance of ATM and ATR inPhyscomitrella patensDNA Damage Repair, Development, and Gene Targeting. Genes 11: 752. doi:10.3390/genes11070752. open access

Matsui, H., Iwakawa, H., Hyon, G.-S., Yotsui, I., Katou, S., Monte, I., Nishihama, R., Franzen, R., Solano, R., & Nakagami, H. (2020). Isolation of Natural Fungal Pathogens from Marchantia polymorpha Reveals Antagonism between Salicylic Acid and Jasmonate during Liverwort-Fungus Interactions. Plant and Cell Physiology 61, 265-275. doi:10.1093/pcp/pcz187. open access

Mishra P., Roggen A., Ljung K., Albani M.C. (2020) Natural variation in adventitious rooting in the alpine perennial Arabis alpina. Plants 9: 184. doi:10.3390/plants9020184. open access

Mueller, L. M., Mombaerts, L., Pankin, A., Davis, S. J., Webb, A. A. R., Goncalves, J., & von Korff, M. (2020). Differential Effects of Day/Night Cues and the Circadian Clock on the Barley Transcriptome(1)([OPEN]). Plant Physiology 183, 765-779. doi:10.1104/pp.19.01411. open access

Najafi, J., Brembu, T., Vie, A.K., Viste, R., Winge, P., Somssich, I.E., and Bones, A.M. (2020). PAMP-INDUCED SECRETED PEPTIDE 3 (PIP3) modulates immunity in Arabidopsis thaliana. J Exp Bot 71, 850-864, doi: 10.1093/jxb/erz482. open access

Nakano, R.T., Ishihama, N., Wang, Y., Takagi, J., Uemura, T., Schulze-Lefert, P., Nakagami, H. (2020) Apoplastic fluid preparation from Arabidopsis thaliana leaves upon interaction with a non-adapted powdery mildew pathogen, Methods in Molecular Biology, 2139:79-88 (2020), doi: 10.1007/978-1-0716-0528-8_6.

Natonik-Bialon, S., Borowska-Wykret, D., Mosca, G., Grelowski, M., Wrzalik, R., Smith, R. S., & Kwiatkowska, D. (2020). Deformation of a cell monolayer due to osmotic treatment: a case study of onion scale epidermis. Botany 98. doi:10.1139/cjb-2019-0027. open access

Neubauer, M., Serrano, I., Rodibaugh, N., Bhandari, D. D., Bautor, J., Parker, J. E., & Innes, R. W. (2020). Arabidopsis EDR1 Protein Kinase Regulates the Association of EDS1 and PAD4 to Inhibit Cell Death. Molecular Plant-Microbe Interactions 33:693-703, doi:10.1094/MPMI-12-19-0339-R. open access

Neumann, U., &  Hay, A. (2020). Seed coat development in explosively dispersed seeds of Cardamine hirsuta. Annals of Botany, 126, 39-59. doi:10.1093/aob/mcz190. open access

Nobori, T., Wang, Y., Wu, J., Stolze, S.C., Tsuda, Y., Finkemeier, I., Nakagami, H., Tsuda, K. (2020) Multidimensional gene regulatory landscape of a bacterial pathogen in plants. Nature Plants, doi: 10.1038/s41477-020-0690-7. open access

Pastorczyk, M., Kosaka, A., Pislewska-Bednarek, M., Lopez, G., Frerigmann, H., Kulak, K., Glawischnig, E., Molina, A., Takano, Y., & Bednarek, P. (2020). The role of CYP71A12 monooxygenase in pathogen-triggered tryptophan metabolism and Arabidopsis immunity. New Phytologist 225, 400-412. doi:10.1111/nph.16118.

Pérez Antón, M., & Hay, A. (2020). Schooling PhD students in plant development. New Phytologist 226, 1544-1547. doi:10.1111/nph.16509. open access

Ponraj, U., Theres, K.(2020) Keep a distance to be different: axillary buds initiating at a distance from the shoot apical meristem are crucial for the perennial life style of Arabis alpina. New Phytologist 227: 116-131, doi.org/10.1111/nph.16512. open access

Rambaud-Lavigne, L., Hay, A. (2020) Floral organ development goes live. Journal of Experimental Botany 71: 2472–8, doi:10.1093/jxb/eraa038. open access

Richter, R., Rossmann, S., Gabriel, D., Toepfer, R., Theres, K., & Zyprian, E. (2020). Differential expression of transcription factor- and further growth-related genes correlates with contrasting cluster architecture inVitis vinifera'Pinot Noir' andVitisspp. genotypes. Theoretical and Applied Genetics, doi:10.1007/s00122-020-03667-0. open access

Romera-Branchat, M., Severing, E., Pocard, C., Ohr, H., Vincent, C., Née, G., Martinez-Gallegos, R., Jang, S., Andrés Lalaguna, F., Madrigal, P. and Coupland, G. (2020) Functional Divergence of the Arabidopsis florigen-interacting bZIP transcription factors FD and FDP. Cell Reports 31, 107717, doi.org/10.1016/j.celrep.2020.107717. open access

Roy, A.-S., Woehle, C., & LaRoche, J. (2020). The Transfer of the Ferredoxin Gene From the Chloroplast to the Nuclear Genome Is Ancient Within the Paraphyletic GenusThalassiosira. Frontiers in Microbiology, 11: 523689. doi:10.3389/fmicb.2020.523689. open access

Sang, Q.*, Pajoro, A.*, Sun, H., Song, B, Yang, X, Stolze, S .C., Andrés Lalaguna, F., Schneeberger, K., Nakagami, H., Coupland, G. (2020) Mutagenesis of a Quintuple Mutant Impaired in Environmental Responses Reveals Roles for CHROMATIN REMODELING4 in the Arabidopsis Floral Transition. Plant Cell, doi: 10.1105/tpc.19.00992. *contributed equally  open access

Schubert, V., Neumann, P., Marques, A., Heckmann, S., Macas, J., Pedrosa-Harand, A., Schubert, I., Jang, T.-S., & Houben, A. (2020). Super-Resolution Microscopy Reveals Diversity of Plant Centromere Architecture. International Journal of Molecular Sciences 21: 3488. doi:10.3390/ijms21103488.

Shah, N., Wakabayashi, T., Kawamura, Y., Skoybjerg, C. K., Wang, M.-Z., Mustamin, Y., Isomura, Y., Gupta, V., Jin, H., Mun, T., Sandal, N., Azuma, F., Fukai, E., Seren, U., Kusakabe, S., Kikuchi, Y., Nitanda, S., Kumaki, T., Hashiguchi, M., Tanaka, H., Hayashi, A., Sonderkaer, M., Nielsen, K., Schneeberger, K., Vilhjalmsson, B., Akashi, R., Stougaard, J., Sato, S., Schierup, M. H., & Andersen, S. (2020). Extreme genetic signatures of local adaptation during Lotus japonicus colonization of Japan. Nature Communications 11: 253. doi:10.1038/s41467-019-14213-y. open access

Song, W., Foerderer, A., Yu, D., & Chai, J. (2020). Structural biology of plant defence. New Phytologist. doi:10.1111/nph.16906. open access

Stich, B., Benke, A., Schmidt, M., Urbany, C., Shi, R., & von Wiren, N. (2020). The maize shoot ionome: Its interaction partners, predictive power, and genetic determinants. Plant, Cell and Environment, doi:10.1111/pce.13823. open access

Stolze, S. C., & Nakagami, H. (2020). Targeted quantification of phosphopeptides by parallel reaction monitoring (PRM). Methods in Molecular Biology 2139, 213-224. doi:10.1007/978-1-0716-0528-8_16.

Strauss, S., Lempe, J., Prusinkiewicz, P., Tsiantis, M., & Smith, R. S. (2020). Phyllotaxis: is the golden angle optimal for light capture? New Phytologist, 225, 499-510. doi:10.1111/nph.16040. open access

Sun, J., Shimizu-Inatsugi, R., Hofhuis, H., Shimizu, K., Hay, A., Shimizu, K. K., & Sese, J. (2020). A recently formed triploidc cardamine insueta inherits leaf vivipary and submergence tolerance traits of parents. Frontiers in Genetics 11: 567262. doi:10.3389/fgene.2020.567262. open access

Thiergart, T.§, Durán, P§., Ellis, T., Vannier, N., Garrido-Oter, R., Roux, F., Alonso-Blanco, C., Ågren*, J., Schulze-Lefert, P.*, Hacquard, S.* (2020) Root microbiota assembly and adaptive differentiation among European Arabidopsis populations. Nature Ecology & Evolution 4:122-131, doi:10.1038/s41559-019-1063-3 .  § joint first authors, *co-corresponding authors

Vayssières A., Mishra P., Roggen A., Neumann U., Ljung K., Albani M.C. (2020) Vernalization shapes shoot architecture and ensures the maintenance of dormant buds in the perennial Arabis alpina. New Phytologist 227: 99-105, doi.org/10.1111/nph.16470. open access

Velanis CN, Perera P, Thomson B, de Leau E, Liang SH, Hartwig B, Förderer A, Thornton H, Arede P, Chen J, Webb KM, Gümüs S, De Jaeger G, Page CA, Hancock CN, Spanos C, Rappsilber J, Voigt P, Turck F, Wellmer F, and J. Goddrich (2020). The domesticated transposase ALP2 mediates formation of a novel Polycomb protein complex by direct interaction with MSI1, a core subunit of Polycomb Repressive Complex 2 (PRC2). PLoS Genet 16: e1008681, doi: 10.1371/journal.pgen.1008681. open access

Walla, A., van Esse, G. W., Kirschner, G. K., Guo, G., Bruenje, A., Finkemeier, I., Simon, R., & von Korff, M. (2020). An Acyl-CoAN-Acyltransferase Regulates Meristem Phase Change and Plant Architecture in Barley. Plant Physiology, 183, 1088-1109. doi:10.1104/pp.20.00087. open access

Xue, J.-Y., Takken, F. L. W., Nepal, M. P., Maekawa, T., & Shao, Z.-Q. (2020). Editorial: Evolution and Functional Mechanisms of Plant Disease Resistance. Frontiers in Genetics 11: 593240. doi:10.3389/fgene.2020.593240. open access

Yuste-Lisbona, F. J., Fernandez-Lozano, A., Pineda, B., Bretones, S., Ortiz-Atienza, A., Garcia-Sogo, B., Mueller, N., Angosto, T., Capel, J., Moreno, V., Jimenez-Gomez, J. M., & Lozano, R. (2020). ENO regulates tomato fruit size through the floral meristem development network. Proceedings of the National Academy of Sciences of the United States of America, 117, 8187-8195. doi:10.1073/pnas.1913688117. open access

Zhang, L., & Jimenez-Gomez, J. M. (2020). Functional analysis ofFRIGIDAusing naturally occurring variation inArabidopsis thaliana. The Plant Journal, 103, 154-165. doi:10.1111/tpj.14716. open access

Zhang, Z., Runions, A., Mentink, R. A., Kierzkowski, D., Karady, M., Hashemi, B., Huijser, P., Strauß, S., Gan, X., Ljung, K., & Tsiantis, M. (2020). A WOX/Auxin Biosynthesis Module Controls Growth to Shape Leaf Form. Current Biology, doi:10.1016/j.cub.2020.09.037. open access

Zhao L, Richards S, Turck F, Kollmann M. (2020) Information integration and decision making in flowering time control. PLoS One15:e0239417. doi: 10.1371/journal.pone.0239417. open access

Zhou Y., Gan X., Viñegra de la Torre N., Neumann U., Albani M.C. (2020) Beyond flowering time: diverse roles of an APETALA2-like transcription factor in shoot architecture and perennial traits. New Phytologist, doi.org/10.1111/nph.16839. open access

Zhu, M., Chen, W., Mirabet, V., Hong, L., Bovio, S., Strauß, S., Schwarz, E. M., Tsugawa, S., Wang, Z., Smith, R. S., Li, C.-B., Hamant, O., Boudaoud, A., & Roeder, A. H. K. (2020). Robust organ size requires robust timing of initiation orchestrated by focused auxin and cytokinin signalling. Nature Plants 6, 686-698. doi:10.1038/s41477-020-0666-7. open access

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