Recent Scientific Publications


Ai, H., Bellstaedt, J., Bartusch, K. S., Eschen-Lippold, L., Babben, S., Balcke, G. U., Tissier, A., Hause, B., Andersen, T. G., Delker, C., & Quint, M. (2023). Auxin-dependent regulation of cell division rates governs root thermomorphogenesis. The EMBO Journal, 42(11): e111926. doi:10.15252/embj.2022111926. open access

Awad, M., Gan, X. GALA: a computational framework for de novo chromosome-by-chromosome assembly with long reads. Nat Commun 14, 204 (2023).  open access

Bhatia, N., Wilson-Sanchez, D., Strauss, S., Vuolo, F., Pieper, B., Hu, Z., Rambaud-Lavigne, L., & Tsiantis, M. (2023). Interspersed expression of CUP-SHAPED COTYLEDON2 and REDUCED COMPLEXITY shapes Cardamine hirsuta complex leaf form. Current Biology. doi:10.1016/j.cub.2023.06.037. open access

Bock, D. G., Liu, J., Novikova, P. Y., & Rieseberg, L. H. (2023). Long-read sequencing in ecology and evolution: Understanding how complex genetic and epigenetic variants shape biodiversity. Molecular Ecology, 32, 1229-1235. doi:10.1111/mec.16884. open access

Brazel, A. J., Fattorini, R., McCarthy, J., Franzen, R., Rümpler, F., Coupland, G., & Ó’Maoiléidigh, D. S. (2023). AGAMOUS mediates timing of guard cell formation during gynoecium development. bioRxiv: the preprint server for biology, (2023.01): 23.525231. open access

Campos Martin, R., Schmickler, S., Goel, M., Schneeberger, K., & Tresch, A. (2023). Reliable genotyping of recombinant genomes using a robust hidden Markov model. Plant Physiology, 192(2), 821-836. doi:10.1093/plphys/kiad191.

Cao, Y., Kümmel, F., Logemann, E., Gebauer, J. M., Lawson, A. W., Yu, D., Uthoff, M., Keller, B., Jirschitzka, J., Baumann, U., Tsuda, K., Chai, J., Schulze-Lefert, P. (2023) Structural polymorphisms within a common powdery mildew effector scaffold as a driver of co-evolution with cereal immune receptors, PNAS 120 (32) e2307604120. open access 

Castellani, M., Zhang, M., Thangavel, G., Sucre, Y. M., Lux, T., Campoy, J. A., Marek, M., Huettel, B., Sun, H., Mayer, K. F. X., Schneeberger, K., Marques, A. (2023) Meiotic recombination dynamics in plants with repeat-based holocentromeres shed light on the primary drivers of crossover patterning. bioRxiv 2023.04.28.538594; doi: 10.1101/2023.04.28.538594. open access 

Costa, L., Marques, A., Buddenhagen, C. E., Pedrosa-Harand, A., & Souza, G. (2023). Investigating the diversification of holocentromeric satellite DNA Tyba in Rhynchospora (Cyperaceae). Annals of Botany, 131(5), 813-825. doi:10.1093/aob/mcad036. open access

Elfarargi, A.F., Gilbault, E., Döring, N., Neto, C., Fulgione, A., Weber, A.P.M., Loudet, O., Hancock, A.M. Genomic basis of adaptation to a novel precipitation regime. Molecular Biology and Evolution, 40(3) 2023, doi: open access

Escudero, M.,  Marques, A.,  Lucek, K., &  Hipp, A. L. (2023).  Genomic hotspots of chromosome rearrangements explain conserved synteny despite high rates of chromosome evolution in a holocentric lineage. Molecular Ecology, doi: 10.1111/mec.17086. open access

Feehan JM, Wang J, Sun X, Choi J, Ahn HK, Ngou BP, Parker JE, Jones JD. 2023. Oligomerization of a plant helper NLR requires cell-surface and intracellular immune receptor activation. Proc. Natl. Acad. Sci. USA 120 (11): e2210406120, doi: 10.1073/pnas.2210406120. open access

Foerderer, A., & Chai, J. (2023). Die another day: phytosulfokine at the molecular trade-off between growth and defense in plants. The EMBO Journal, 42(6): e113540. doi:10.15252/embj.2023113540

Formosa-Jordan, P., Holloway, D. M., & Diambra, L. (2023). Editorial: Pattern formation in biology. Frontiers in Physics, 11: 1161890. doi:10.3389/fphy.2023.1161890. open access

Frommer, B., Muellner, S., Holtgraewe, D., Viehoever, P., Huettel, B., Toepfer, R., Weisshaar, B., & Zyprian, E. (2023). Phased grapevine genome sequence of an Rpv12 carrier for biotechnological exploration of resistance to Plasmopara viticola. Frontiers in Plant Science, 14: 1180982. doi:10.3389/fpls.2023.1180982. open access

Getzke F, Hassani MA, Crüsemann M, Malisic M, Zhang P, Ishigaki Y, Böhringer N, Jiménez Fernández A, Wang L, Ordon J, Ma K-W, Thiergart T, Harbort CJ, Wesseler H, Miyauchi S, Garrido-Oter R, Shirasu K, Schäberle TF, Hacquard S*, Schulze-Lefert P*. (2023) Co-functioning of bacterial exometabolites drives root microbiota establishment. PNAS, 120 (15):e2221508120, doi: 10.1073/pnas.2221508120. *co-corresponding authors. open access

Giaume, F., Bono, G. A., Martignago, D., Miao, Y., Vicentini, G., Toriba, T., Wang, R., Kong, D., Cerise, M., Chirivi, D., Biancucci, M., Khahani, B., Morandini, P., Tameling, W., Martinotti, M., Goretti, D., Coupland, G., Kater, M., Brambilla, V., Miki, D., Kyozuka, J., & Fornara, F. (2023). Two florigens and a florigen-like protein form a triple regulatory module at the shoot apical meristem to promote reproductive transitions in rice. Nature Plants, 9(4), 525-534. doi:10.1038/s41477-023-01383-3.

Griebel T, Lapin D, Locci F, Kracher B, Bautor J, Concia L, Benhamed M, Parker JE*. 2023. Arabidopsis Topless-related 1 mitigates physiological damage and growth penalties of induced immunity. New Phytologist. doi: 10.1111/nph.19054. open access

Hartwig, T., Banf, M., Passaia Prietsch, G., Zhu, J.-Y., Mora-Ramírez, I., Schippers, J. H. M., Snodgrass, S. J., Seetharam, A. S., Huettel, B., Kolkman, J. M., Yang, J., Engelhorn, J., Wang, Z.-W.: Hybrid allele-specific ChIP-seq analysis identifies variation in brassinosteroid-responsive transcription factor binding linked to traits in maize. Genome Biology 2023. doi: 10.1186/s13059-023-02909-w. open access

Johanndrees, O., Baggs, E. L., Uhlmann, C., Locci, F., Laessle, H., Melkonian, K., Käufer, K., Dongus, J. A., Nakagami, H., Krasileva, K. V., Parker, J. E.*, & Lapin, D*. (2023). Variation in plant Toll/Interleukin-1 receptor domain protein dependence on ENHANCED DISEASE SUSCEPTIBILITY 1. Plant Physiology, 191: 626-642, kiac480, doi:10.1093/plphys/kiac480.  open access

Kuo, Y.-T, Souza Câmara, A., Schubert, V., Neumann, P., Macas, J., Melzer, M., Chen, J., Fuchs, J., Abel, S., Klocke, E., Huettel, B., Himmelbach, A., Demidov, D., Dunemann, F., Mascher, M., Ishii, T., Marques, A., Houben, A. (2023) Holocentromeres can consist of merely a few megabase-sized satellite arrays. Nature Communications 14, 3502, doi: 10.1038/s41467-023-38922-7. open access

Kusch, S., Qian, J., Loos, A., Kümmel, F., Spanu, P. D., & Panstruga, R. (2023). Long-term and rapid evolution in powdery mildew fungi. Molecular Ecology. doi:10.1111/mec.16909.

Mahlandt, A., Singh, D. K., & Mercier, R. (2023). Engineering apomixis in crops. Theoretical and Applied Genetics, 136(6): 131. doi:10.1007/s00122-023-04357-3. open access

Martignago, D., da Silveira Falavigna, V., Lombardi, A., Gao, H., Kurkowski, P. K., Galbiati, M., Tonelli, C., Coupland, G., & Conti, L. (2023). The bZIP transcription factor AREB3 mediates FT signalling and floral transition at the Arabidopsis shoot apical meristem. PLoS Genetics, 19(5): e1010766. doi:10.1371/journal.pgen.1010766. open access

Myers, Z. A., Wootan, C. M., Liang, Z., Zhou, P., Engelhorn, J., Hartwig, T., & Nathan, S. M. (2023). Conserved and variable heat stress responses of the Heat Shock Factor transcription factor family in maize and Setaria viridis. Plant Direct, 7(4): e489. doi:10.1002/pld3.489. open access

Nishikawa, M., Katsu, K., Koinuma, H., Hashimoto, M., Neriya, Y., Matsuyama, J., Yamamoto, T., Suzuki, M., Matsumoto, O., Matsui, H., Nakagami, H., Maejima, K., Namba, S., & Yamaji, Y. (2023). Interaction of EXA1 and eIF4E Family Members Facilitates Potexvirus Infection in Arabidopsis thaliana. Journal of Virology. doi:10.1128/jvi.00221-23.

Ordon, J., Kiel, N., Becker, D., Kretschmer, C., Schulze-Lefert, P., & Stuttmann, J. (2023). Targeted gene deletion with SpCas9 and multiple guide RNAs in Arabidopsis thaliana: four are better than two. Plant Methods, 19(1): 30,  doi:10.1186/s13007-023-01010-4. open access

Prautsch, J., Erickson, J. L., Oezyuerek, S., Gormanns, R., Franke, L., Lu, Y., Marx, J., Niemeyer, F., Parker, J. E., Stuttmann, J., & Schattat, M. H. (2023). Effector XopQ-induced stromule formation in Nicotiana benthamiana depends on ETI signaling components ADR1 and NRG1. Plant Physiology, 191: 161-176, doi:10.1093/plphys/kiac481.

Russell, N. J., Schaare, H. L., Bellón Lara, B., Dang, Y., Feldmeier-Krause, A., Meemken, M.-T., & Oliveira-Lopes, F. N. (2023). Max Planck PostdocNet Survey Report 2022. doi:10.17617/2.3507886.

Thangavel, G., Hofstatter, P.G., Mercier, R., Marques A. Tracing the evolution of the plant meiotic molecular machinery. Plant Reproduction (2023), doi: 10.1007/s00497-022-00456-1. open access

Wang, Y., & Underwood, C. J. (2023). The Apomixis. Current Biology, 33(8). doi:10.3109/00207454.201.

Weisweiler, M., & Stich, B. (2023). Benchmarking of structural variant detection in the tetraploid potato genome using linked-read sequencing. Genomics, 115(2): 110568. doi:10.1016/j.ygeno.2023.110568. open access

Wu, P., Stich, B., Renner, J., Muders, K., Prigge, V., & van Inghelandt, D. (2023). Optimal implementation of genomic selection in clone breeding programs-Exemplified in potato: I. Effect of selection strategy, implementation stage, and selection intensity on short-term genetic gain. The Plant Genome, 16(2): e20327. doi:10.1002/tpg2.20327.  open access

Yotsui et al., LysM-mediated signaling in Marchantia polymorpha highlights the conservation of pattern-triggered immunity in land plants, Current Biology (2023), doi: 10.1016/j.cub.2023.07.068. open access



Acevedo-Garcia, J., Walden, K., Leissing, F., Baumgarten, K., Drwiega, K., Kwaaitaal, M., Reinstädler, A., Freh, M., Dong, X., James, G.V., Baus, L.C., Mascher, M., Stein, N., Schneeberger, K., Brocke-Ahmadinejad, N., Kollmar, M., Schulze-Lefert, P., Panstruga, R. (2022) Barley Ror1 encodes a class XI myosin required for mlo-based broad-spectrum resistance to the fungal powdery mildew pathogen. Plant Journal, doi: 10.1111/tpj.15930. open access

Almario, J., Mahmoudi, M., Kroll, S., Agler, M., Placzek, A., Mari, A., & Kemen, E. (2022). The Leaf Microbiome of Arabidopsis Displays Reproducible Dynamics and Patterns throughout the Growing Season. mBio, 13(3). doi:10.1128/mbio.02825-21.

Amanda, D., Frey, F. P., Neumann, U., Przybyl, M., Šimura, J., Zhang, Y., Chen, Z., Gallavotti, A., Fernie, A. R., Ljung, K., & Acosta, I. F. (2022). Auxin boosts energy generation pathways to fuel pollen maturation in barley. Current Biology. doi:10.1016/j.cub.2022.02.073. open access

Bonthala, V. S., & Stich, B. (2022). Genetic Divergence of Lineage-Specific Tandemly Duplicated Gene Clusters in Four Diploid Potato Genotypes. Frontiers in Plant Science, 13: 875202. doi:10.3389/fpls.2022.875202. open acces

Bourceret, A., Guan, R., Dorau, K., Mansfeldt, T., Omidbakhshfard, A., Medeiros, D. B., Fernie, A. R., Hofmann, J., Sonnewald, U., Mayer, J., Gerlach, N., The RECONSTRUCT consortium, Bucher, M., Garrido Oter, R., Spaepen, S., & Schulze-Lefert, P. (2022). Maize Field Study Reveals Covaried Microbiota and Metabolic Changes in Roots over Plant Growth. mBio, e02584-21. doi:10.1128/mbio.02584-21. open access

Bowman, J. L., M. Arteaga-Vazquez, F. Berger, L. N. Briginshaw, P. Carella, A. Aguilar-Cruz, K. M. Davies, T. Dierschke, L. Dolan, A. E. Dorantes-Acosta, T. J. Fisher, E. Flores-Sandoval, K. Futagami, K. Ishizaki, R. Jibran, T. Kanazawa, H. Kato, T. Kohchi, J. Levins, S. S. Lin, H. Nakagami, R. Nishihama, F. Romani, S. Schornack, Y. Tanizawa, M. Tsuzuki, T. Ueda, Y. Watanabe, K. T. Yamato, and S. Zachgo. (2022)The renaissance and enlightenment of Marchantia as a model system.  Plant Cell. doi: 10.1093/plcell/koac219.

Casale, F., Van Inghelandt, D., Weisweiler, M., Li, J. Q., & Stich, B. (2022). Genomic prediction of the recombination rate variation in barley - A route to highly recombinogenic genotypes. Plant Biotechnology Journal, 20, 676-690. doi:10.1111/pbi.13746. open acces

Chandrasekar, B., Wanke, A., Wawra, S., Saake, P., Mahdi, L., Charura, N., Neidert, M., Poschmann, G., Malisic, M., Thiele, M., Stuehler, K., Dama, M., Pauly, M., & Zuccaro, A. (2022). Fungi hijack a ubiquitous plant apoplastic endoglucanase to release a ROS scavenging beta-glucan decasaccharide to subvert immune responses. Plant Cell, 34(7), 2765-2784. doi:10.1093/plcell/koac114. open acces

Copeland, C. (2022). The feeling is mutual: Increased host putrescine biosynthesis promotes both plant and endophyte growth. Plant Physiology, 188(4), 1939-1941. doi:10.1093/plphys/kiac001. open acces

Dongus JA, Bhandari DD, Penner E, Lapin D, Stolze SC, Harzen A, Patel M, Archer L, Dijkgraaf L, Shah J, Nakagami H, Parker JE. Cavity surface residues of PAD4 and SAG101 contribute to EDS1 dimer signaling specificity in plant immunity. 2022. Plant Journal 110:1415-1432, doi: 10.1111/tpj.15747. open acces

Durán, P., T. J. Ellis, T. Thiergart, J. Agren, and S. Hacquard (2022) Climate drives rhizosphere microbiome variation and divergent selection between geographically distant Arabidopsis populations.  New Phytologist. doi: 10.1111/nph.18357.

Durán, P., Flores-Uribe, J., Wippel, K., Zhang, P., Guan, R., Melkonian, B., Melkonian, M., Garrido-Oter, R. (2022) Shared features and reciprocal complementation of the Chlamydomonas and Arabidopsis microbiota. Nature Communications 13, 406, doi: 10.1038/s41467-022-28055-8. open access

Durand, S., Lian, Q., Jing, J., Ernst, M., Grelon, M., Zwicker, D. and Mercier, R. (2022) Joint control of meiotic crossover patterning by the synaptonemal complex and HEI10 dosage. Nature Communications 13, 5999, doi: 10.1038/s41467-022-33472-w. open acces

Emonet, A.,  Hay, A. (2022) Development and Diversity of Lignin Patterns. Plant Physiology 190: 31-43, doi: 10.1093/plphys/kiac261. open acces

Flood, P. J., Nowrousian, M., Huettel, B., Woehle, C., Becker, K., Wollenweber, T. E., Begerow, D., & Grefen, C. (2022). Draft genome of the aardaker (Lathyrus tuberosus L.), a tuberous legume. BMC genomic data, 23(1): 70. doi:10.1186/s12863-022-01083-5. open acces

Förderer, A.§, Li, E.§, Lawson, A. W.§, Deng, Y.-N.§, Sun, Y., Logemann, E., Zhang, X., Wen, J., Han, Z., Chang, J., Chen, Y.#, Schulze-Lefert, P.#, Chai, J.# (2022) A wheat resistosome defines common principles of immune receptor channels. Nature, doi: 10.1038/s41586-022-05231-w. open access
§Equal contribution authors #corresponding authors

Förderer, A., Yu, D., Li, E., Chai, J. (2022) Resistosomes at the interface of pathogens and plants. Current Opinion in Plant Biology 67, 102212, doi: 10.1016/j.pbi.2022.102212.

Fulgione, A., Neto, C., Elfarargi, A. F., Tergemina, E., Ansari, S., Göktay, M., Dinis, H., Döring, N., Flood, P. J., Rodriguez-Pacheco, S., Walden, N., Koch, M., Roux, F., Hermisson, J., & Hancock, A. M. (2022). Parallel reduction in flowering time from de novo mutations enable evolutionary rescue in colonizing lineages. Nature Communications, 13(1): 1461. doi:10.1038/s41467-022-28800-z. open access

Fuessl, M., König, A.-C., Eirich, J., Hartl, M., Kleinknecht, L., Bohne, A.-V., Harzen, A., Kramer, K., Leister, D., Nickelsen, J., & Finkemeier, I. (2022). Dynamic light- and acetate-dependent regulation of the proteome and lysine acetylome of Chlamydomonas. The Plant Journal, 109(1), 261-277. doi:10.1111/tpj.15555. open acces

Gao, H., and G. Coupland (2022) PIF4 and CDF2 co-operate to regulate cell elongation in Arabidopsis thaliana. Nature Plants. doi: 10.1038/s41477-022-01220-z. open acces

Gao, H., Song, W., Severing, E., Vaysières, A., Huettel, B., Franzen, R., Richter, R., Chai, J., Coupland, G. (2022) PIF4 enhances DNA binding by CDF2 to co-regulate target gene expression and promote Arabidopsis hypocotyl cell elongation. Nature Plants, doi: 10.1038/s41477-022-01213-y. open acces

Goel, M., & Schneeberger, K. (2022). plotsr: visualizing structural similarities and rearrangements between multiple genomes. Bioinformatics 38 (10), 2922-2926. doi:10.1093/bioinformatics/btac661.

Hacquard, S., Wang, E., Slater, H., & Martin, F. (2022). Impact of global change on the plant microbiome.New Phytologist, SI, 234(6), 1907-1909. doi:10.1111/nph.18187. open acces

Hofstatter, P. G., Thangavel, G., Lux, T., Neumann, P., Vondrak, T., Novak, P., Zhang, M., Costa, L., Castellani, M., Scott, A., Toegelová, H., Fuchs, J., Mata-Sucre, Y., Dias, Y., Vanzela, A. L. L., Huettel, B., Almeida, C. C. S., Šimková, H., Souza, G., Pedrosa-Harand, A., Macas, J., Mayer, K. F. X., Houben, A., & Marques, A. (2022). Repeat-based holocentromeres influence genome architecture and karyotype evolution. Cell. doi:10.1016/j.cell.2022.06.045. open acces

Huang, S., Jia, A., Song, W., Hessler, G., Meng, Y., Sun, Y., Xu, L., Laessle, H., Jirschitzka, J., Ma, S., Xiao, Y., Yu, D., Hou, J., Liu, R., Sun, H., Liu, X., Han, Z., Chang, J., Parker, J. E., & Chai, J. (2022). Identification and receptor mechanism of TIR-catalyzed small molecules in plant immunity. Science, doi 10.1126/science.abq3297.

Jia, A., Huang, S., Song, W., Wang, J., Meng, Y., Sun, Y., Xu, L., Laessle, H., Jirschitzka, J., Hou, J., Zhang, T., Yu, W., Hessler, G., Li, E., Ma, S., Yu, D., Gebauer, J., Baumann, U., Liu, X., Han, Z., Chang, J., Parker, J. E., & Chai, J. (2022). TIR-catalyzed ADP-ribosylation reactions produce signaling molecules for plant immunity. Science. Doi: 10.1126/science.abq8180.

Lapin, D., Johanndrees, O., Wu, Z., Li, X., & Parker, J. E. (2022). Molecular innovations in plant TIR-based immunity signaling. Plant Cell, 34, 1479-1496. doi:10.1093/plcell/koac035. open acces

Lebreton, A., Tang, N., Kuo, A., LaButti, K., Andreopoulos, W., Drula, E., Miyauchi, S., Barry, K., Clum, A., Lipzen, A., Mousain, D., Ng, V., Wang, R., Dai, Y., Henrissat, B., Grigoriev, I. V., Guerin-Laguette, A., Yu, F., & Martin, F. M. (2022). Comparative genomics reveals a dynamic genome evolution in the ectomycorrhizal milk-cap (Lactarius) mushrooms. New Phytologist, 235(1), 306-319. doi:10.1111/nph.18143.

Lian, Q. C., V. Solier, B. Walkemeier, S. Durand, B. Huettel, K. Schneeberger, and R. Mercier (2022) The megabase-scale crossover landscape is largely independent of sequence divergence. Nature Communications 13 (1). doi: 10.1038/s41467-022-31509-8. open acces

Lian, Q., Solier, V., Walkemeier, B., Durand, S., Huettel, B., Schneeberger, K., & Mercier, R. (2022). The megabase-scale crossover landscape is largely independent of sequence divergence. Nature Communications, 13 (1): 3828. doi:10.1038/s41467-022-31509-8.

Liang, Z., Myers, Z. A., Petrella, D., Engelhorn, J., Hartwig, T., & Springer, N. M. (2022). Mapping responsive genomic elements to heat stress in a maize diversity panel. Genome Biology, 23(1): 234. doi:10.1186/s13059-022-02807-7.

Liu S, Strauss S, Adibi M, Mosca G, Yoshida S, Dello Ioio R, Runions A, Andersen TG, Grossmann G, Huijser P, Smith RS, Tsiantis M. (2022) Cytokinin promotes growth cessation in the Arabidopsis root. Current Biology, 32:1974-1985, doi: 10.1016/j.cub.2022.03.019, (2022). open access

Loo, E.-.-I., Tajima, Y., Yamada, K., Kido, S., Hirase, T., Ariga, H., Fujiwara, T., Tanaka, K., Taji, T., Somssich, I. E., Parker, J. E., & Saijo, Y. (2022). Recognition of Microbe- and Damage-Associated Molecular Patterns by Leucine-Rich Repeat Pattern Recognition Receptor Kinases Confers Salt Tolerance in Plants. Molecular Plant-Microbe Interactions, 35(7), 554-566. doi:10.1094/MPMI-07-21-0185-Fl. open acces

Ma, K.-W., Ordon, J., & Schulze-Lefert, P. (2022). Gnotobiotic Plant Systems for Reconstitution and Functional Studies of the Root Microbiota. Current Protocols 2: e362. doi:10.1002/cpz1.362. open access

Majda, M., Trozzi, N., Mosca, G., Smith, R.S. (2022) How Cell Geometry and Cellular Patterning Influence Tissue Stiffness. International Journal of Molecular Sciences 23:5651, doi: 10.3390/ijms23105651. open access

Mataigne, V., Vannier, N., Vandenkoornhuyse, P., Hacquard, S. Multi-genome metabolic modeling predicts functional inter-dependencies in the Arabidopsis root microbiome. Microbiome 10, 217 (2022). doi: 10.1186/s40168-022-01383-z. open acces

Matsumoto, A., Schlueter, T., Melkonian, K., Takeda, A., Nakagami, H., & Mine, A. (2022). p A versatile Tn7 transposon-based bioluminescence tagging tool for quantitative and spatial detection of bacteria in plants. Plant Communications, 3(1): 100227. doi:10.1016/j.xplc.2021.100227. open acces

Melkonian, K., Stolze, S. C., Harzen, A., & Nakagami, H. (2022). miniTurbo-based interactomics of two plasma membrane-localized SNARE proteins in Marchantia polymorpha. New Phytologist, 235(2), 786-800. doi:10.1111/nph.18151. open acces

Meyer, F., et al (2022). Critical Assessment of Metagenome Interpretation: the second round of challenges. Nature Methods 19(4):429-440,  doi: 10.1038/s41592-022-01431-4. open access

Modesto, I., V. Inacio, P. Novikova, I. Carrasquinho, Y. Van de Peer, and C. M. Miguel (2022) SNP Detection in Pinus pinaster Transcriptome and Association with Resistance to Pinewood Nematode. Forests 13 (6). doi: 10.3390/f13060946.

Mueller, M. C., Kunz, L., Schudel, S., Lawson, A. W., Kammerecker, S., Isaksson, J., Wyler, M., Graf, J., Sotiropoulos, A. G., Praz, C. R., Manser, B., Wicker, T., Bourras, S., & Keller, B. (2022). Ancient variation of the AvrPm17 gene in powdery mildew limits the effectiveness of the introgressed rye Pm17 resistance gene in wheat. Proceedings of the National Academy of Sciences of the United States of America, 119(30): e2108808119. doi:10.1073/pnas.2108808119.

Nobori, T., Cao, Y., Entila, F., Dahms, E., Tsuda, Y., Garrido Oter, R., & Tsuda, K. (2022). Dissecting the cotranscriptome landscape of plants and their microbiota. EMBO Reports, 23: e55380. doi:10.15252/embr.202255380.

Novikova, P. Y., Kolesnikova, U. K., & Scott, A. D. (2022). Ancestral self-compatibility facilitates the establishment of allopolyploids in Brassicaceae. Plant Reproduction. doi:10.1007/s00497-022-00451-6.

Ortiz, D., Chen, J., Outram, M. A., Saur, I. M. L., Upadhyaya, N. M., Mago, R., Ericsson, D. J., Cesari, S., Chen, C., Williams, S. J., & Dodds, P. N. (2022). The stem rust effector protein AvrSr50 escapes Sr50 recognition by a substitution in a single surface-exposed residue. New Phytologist, 234(2), 592-606. doi:10.1111/nph.18011. open acces

Oruganti, V., Toegelova, H., Pecinka, A., Madlung, A., & Schneeberger, K. (2022). Rapid large-scale genomic introgression in Arabidopsis suecica via an autoallohexaploid bridge. Genetics. doi:10.1093/genetics/iyac132.

Parker, J. E., Hessler, G., & Cui, H. (2022). A new biochemistry connecting pathogen detection to induced defense in plants. New Phytologist, 234(3), 819-826. doi:10.1111/nph.17924. open acces

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