Scientific Publications since 2002

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Albani, M.; Castaings, L.; Woetzel, S.; Mateos, J. L.; Wunder, J.; Wang, R.; Reymond, M.; Coupland, G.: PEP1 of Arabis alpina Is Encoded by Two Overlapping Genes That Contribute to Natural Genetic Variation in Perennial Flowering. PLoS Genetics 8(12), e1003130 (2012)

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Alcázar, R.; Pecinka, A.; Aarts, M. G. M.; Fransz, P. F.; Koornneef, M.: Signals of speciation within Arabidopsis thaliana in comparison with its relatives. Current Opinion in Plant Biology 15 (2), pp. 205 - 211 (2012)

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Andrés, F.; Coupland, G.: The genetic basis of flowering responses to seasonal cues. Nature Reviews Genetics 13 (9), pp. 627 - 639 (2012)

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Bagheri, H.; El-Soda, M.; van Oorschot, I.; Hanhart, C.; Bonnema, G.; Jansen-van den Bosch, T.; Mank, R.; Keurentjes, J.; Meng, L.; Wu, J. et al.; Koornneef, M.; Aarts, M. G. M.: Genetic analysis of morphological traits in a new, versatile, rapid-cycling Brassica rapa recombinant inbred line population. Frontiers in Plant Genetics and Genomics 3, 00183 (2012)

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Bai, S.; Liu, J.; Chang, C.; Zhang, L.; Maekawa, T.; Wang, Q.; Xiao, W.; Liu, Y.; Chai, J.; Takken, F. L. W. et al.; Schulze-Lefert, P.; Shen, Q.-H.: Structure-Function Analysis of Barley NLR Immune Receptor MLA10 Reveals Its Cell Compartment Specific Activity in Cell Death and Disease Resistance. PLoS Pathogens 8 (6), doi:10.1371/journal.ppat.1002752 (2012)

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Bernal, M.; Casero, D.; Singh, V.; Wilson, G. T.; Grande, A.; Yang, H.; Dodani, S. C.; Pellegrini, M.; Huijser, P.; Connolly, E. L. et al.; Merchant, S. S.; Kraemer, U.: Transcriptome Sequencing Identifies SPL7-Regulated Copper Acquisition Genes FRO4/FRO5 and the Copper Dependence of Iron Homeostasis in Arabidopsis. Plant Cell 24 (2), pp. 738 - 761 (2012)

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Beutin, L.; Hammerl, J. A.; Strauch, E.; Reetz, J.; Dieckmann, R.; Kelner-Burgos, Y.; Martin, A.; Miko, A.; Strockbine, N. A.; Lindstedt, B. A. et al.; Horn, D.; Monse, H.; Huettel, B.; Mueller, I.; Stueber, K.; Reinhardt, R.: Spread of a Distinct Stx2-Encoding Phage Prototype among Escherichia coli O104:H4 Strains from Outbreaks in Germany, Norway, and Georgia. Journal of Virology 86 (19), pp. 10444 - 10455 (2012)

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Bhosale, S. U.; Stich, B.; Rattunde, H. F. W.; Weltzien, E.; Haussmann, B. I. G.; Hash, C. T.; Ramu, P.; Cuevas, H. E.; Paterson, A. H.; Melchinger, A. E. et al.; Parzies, H. K.: Association analysis of photoperiodic flowering time genes in west and central African sorghum [Sorghum bicolor (L.) Moench]. BMC Plant Biology 12, 32 (2012)

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Birkenbihl, R.; Diezel, C.; Somssich, I. E.: Arabidopsis WRKY33 Is a Key Transcriptional Regulator of Hormonal and Metabolic Responses toward Botrytis cinerea Infection. Plant Physiology 159 (1), pp. 266 - 285 (2012)

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Bulgarelli, D.; Rott, M.; Schlaeppi, K.; Ver Loren van Themaat, E.; Ahmadinejad, N.; Assenza, F.; Rauf, P.; Huettel, B.; Reinhardt, R.; Schmelzer, E. et al.; Peplies, J.; Gloeckner, F. O.; Amann, R.; Eickhorst, T.; Schulze-Lefert, P.: Revealing structure and assembly cues for Arabidopsis root-inhabiting bacterial microbiota. NATURE 488 (7409), pp. 91 - 95 (2012)

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Buonocore, F.; Castro, R.; Randelli, E.; Lefranc, M.-P.; Six, A.; Kuhl, H.; Reinhardt, R.; Facchiano, A.; Boudinot, P.; Scapigliati, G.: Diversity, Molecular Characterization and Expression of T Cell Receptor gamma in a Teleost Fish, the Sea Bass (Dicentrarchus labrax, L). PLoS One 7 (10), e47957 (2012)

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Bus, A.; Hecht, J.; Huettel, B.; Reinhardt, R.; Stich, B.: High-throughput polymorphism detection and genotyping in Brassica napus using next-generation RAD sequencing. BMC Genomics 13, 281 (2012)

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Campoli, C.; Drosse, B.; Searle, I.; Coupland, G.; von Korff, M.: Functional characterisation of HvCO1, the barley (Hordeum vulgare) flowering time ortholog of CONSTANS. The Plant Journal 69 (5), pp. 868 - 880 (2012)

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Campoli, C.; Shtaya, M.; Davis, S. J.; von Korff, M.: Expression conservation within the circadian clock of a monocot: natural variation at barley Ppd-H1 affects circadian expression of flowering time genes, but not clock orthologs. BMC Plant Biology 12, 97 (2012)

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Chao, Y.; Papenfort, K.; Reinhardt, R.; Sharma, C.M.; Vogel, J.: An atlas of Hfq-bound transcripts reveals 3 ' UTRs as a genomic reservoir of regulatory small RNAs. EMBO Journal 31 (20), pp. 4005 - 4019 (2012)

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Chitwood, D. H.; Headland, L. R.; Filiault, D. L.; Kumar , R.; Jiménez-Gómez, J. M.: Native Environment Modulates Leaf Size and Response to Simulated Foliar Shade across Wild Tomato Species. PLoS One 7 (1), e29570 (2012)

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Dam, B.; Dam, S.; Kube, M.; Reinhardt, R.; Liesack, W.: Complete Genome Sequence of Methylocystis sp Strain SC2, an Aerobic Methanotroph with High-Affinity Methane Oxidation Potential. Journal of Bacteriology (Washington, DC) 194 (21), pp. 6008 - 6009 (2012)

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Dam, B.; Kube, M.; Dam, S.; Reinhardt, R.; Liesack, W.: Complete Sequence Analysis of Two Methanotroph-Specific repABC-Containing Plasmids from Methylocystis sp Strain SC2. Applied and Environmental Microbiology 78 (12), pp. 4373 - 4379 (2012)

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de Meaux, J.; Pecinka, A.: The Arabidopsis genus: An emerging model to elucidate the molecular basis of interspecific differences in transposable element activity. Mobile Genetic Elements 2, pp. 142 - 144 (2012)

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Delgado-Cerezo, M.; Sánchez-Rodríguez, C.; Escudero, V.; Miedes, E.; Virginia Fernánde, P.; Jordá, L.; Hernández-Blanco, C.; Sánchez-Vallet, A.; Bednarek, P.; Schulze-Lefert, P. et al.; Somerville, S.; Estevez, J. M.; Persson, S.; Molina, A.: Arabidopsis heterotrimeric G protein regulates cell wall-mediated resistance to necrotrophic fungi. Molecular Plant 5, pp. 98 - 114 (2012)

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Dello Ioio, R.; Galinha, C.; Fletcher, A. G.; Grigg, S. P.; Molnar, A.; Willemsen, V.; Scheres, B.; Sabatini, S.; Baulcombe, D.; Maini, P. K. et al.; Tsiantis, M.: A PHABULOSA/Cytokinin Feedback Loop Controls Root Growth in Arabidopsis. Current Biology 22 (18), pp. 1699 - 1704 (2012)

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Diederich, M.; Hansmann, T.; Heinzmann, J.; Barg-Kues, B.; Herrmann, D.; Aldag, P.; Baulain, U.; Reinhardt, R.; Kues, W.; Weissgerber, C. et al.; Haaf, T.; Niemann, H.: DNA methylation and mRNA expression profiles in bovine oocytes derived from prepubertal and adult donors. (2012)

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Dong, X.; Reimer, J. J.; Goebel, U.; Engelhorn, J.; He, F.; Schoof, H.; Turck, F.: Natural variation of H3K27me3 distribution between two Arabidopsis accessions and its association with flanking transposable elements. Genome Biology 13, R117 (2012)

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Draffehn, A.; Durek, P.; Nunes-Nesi, A.; Stich, B.; Fernie, A.; Gebhardt, C.: Tapping natural variation at functional level reveals allele specific molecular characteristics of potato invertase Pain-1. Plant, Cell and Environment 35 (12), pp. 2143 - 2154 (2012)

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Duemcke, S.; Seizl, M.; Etzold, S.; Pirkl, N.; Martin, D.; Cramer, P.; Tresch, A.: One Hand Clapping: detection of condition-specific transcription factor interactions from genome-wide gene activity data. Nucleic Acids Research (London) 40 (18), pp. 8883 - 8892 (2012)

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Elrouby, N.; Bureau, T. E.: Modulation of AUXIN-BINDING PROTEIN 1 gene expression in maize and the teosintes by transposon insertions in its promoter. Molecular and General Genetics 287 (2), pp. 143 - 153 (2012)

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Engelhorn, J.; Reimer, J. J.; Leuz, I.; Goebel, U.; Huettel, B.; Farrona, S.; Turck, F.: DEVELOPMENT-RELATED PcG TARGET IN THE APEX 4 controls leaf margin architecture in Arabidopsis thaliana. Development 139 (14), pp. 2566 - 2575 (2012)

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Ernst, A. M.; Jekat, S. B.; Zielonka, S.; Mueller, B.; Neumann, U.; Rueping, B.; Twyman, R. M.; Krzyzanek, V.; Pruefer, D.; Noll, G. A.: Sieve element occlusion (SEO) genes encode structural phloem proteins involved in wound sealing of the phloem. Proceedings of the National Academy of Sciences of the United States of America 109 (28), pp. E1980 - E1989 (2012)

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Faure, S.; Turner, A. S.; Gruszka, D.; Christodoulou, V.; Davis, S. J.; von Korff, M.; Laurie, D. A.: Mutation at the circadian clock gene EARLY MATURITY 8 adapts domesticated barley (Hordeum vulgare) to short growing seasons. Proceedings of the National Academy of Sciences of the United States of America 109 (21), pp. 8328 - 8333 (2012)

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Fernandez Tiburcio, A.; Wollenweber, B.; Zilberstein, A.; Koncz, C.: Abiotic stress tolerance. PLANT SCIENCE 182, pp. 1 - 2 (2012)

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Frei Dit Frey, N.; Mbengue, M.; Kwaaitaal, M.; Nitsch, L.; Altenbach, D.; Haeweker, H.; Lozano-Duran, R.; Njo, M. F.; Beeckman, T.; Huettel, B. et al.; Borst, J. W.; Panstruga, R.; Robatzek, S.: Plasma Membrane Calcium ATPases Are Important Components of Receptor-Mediated Signaling in Plant Immune Responses and Development. Plant Physiology 159 (2), pp. 798 - + (2012)

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Fritsche , G.; Wang, X.; Li, J.; Stich, B.; Kopisch-Obuch, F.; Endrigkeit, J.; Frauen, M.; Friedt, W.; Meng, J.; Jung, C.: A candidate gene based association study of tocopherol content and composition in rapeseed (Brassica napus). Frontiers in Plant Genetics and Genomics 3, 129 (2012)

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Galvao, V. C.; Nordstroem, K.; Lanz, C.; Sulz, P.; Mathieu, J.; Pose, D.; Schmid, M.; Weigel, D.; Schneeberger, K.: Synteny-based mapping-by-sequencing enabled by targeted enrichment. The Plant Journal 71 (3), pp. 517 - 526 (2012)

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Geay, F.; Zambonino-Infante, J.; Reinhardt, R.; Kuhl, H.; Santigosa, E.; Cahu, C.; Mazurais, D.: Characteristics of fads2 gene expression and putative promoter in European sea bass (Dicentrarchus labrax): Comparison with salmonid species and analysis of CpG methylation. MARINE GENOMICS 5, pp. 7 - 13 (2012)

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Gigolashvili, T.; Geier, M.; Ashykhmina, N.; Frerigmann, H.; Wulfert, S.; Krueger, S.; Mugford, S. G.; Kopriva, S.; Haferkamp, I.; Flügge, U.-I.: The Arabidopsis Thylakoid ADP/ATP Carrier TAAC Has an Additional Role in Supplying Plastidic Phosphoadenosine 5′-Phosphosulfate to the Cytosol. The Plant Cell 24, pp. 4187 - 4204 (2012)

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Graeber, K.; Nakabayashi, K.; Miatton, E.; Leubner-Metzger, G.; Soppe, W. J. J.: Molecular mechanisms of seed dormancy. Plant, Cell and Environment 35 (10), pp. 1769 - 1786 (2012)

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Groscurth, S.; Mueller, B.; Schwan, S.; Menzel, M.; Diekstall, F.; Senft, M.; Kendall, A.; Kommor, B. A.; Neumann, U.; Kalischuk, M. et al.; Kawchuk, L. M.; Krzyzanek, V.; Heilmann, A.; Stubbs, G.; Twyman, R. M.; Pruefer, D.; Noll, G. A.: Artificial Forisomes Are Ideal Models of Forisome Assembly and Activity That Allow the Development of Technical Devices. Biomacromolecules 13 (10), pp. 3076 - 3086 (2012)

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Gu, C.; Shabab, M.; Strasser, R.; Wolters, P. J.; Shindo, T.; Niemer, M.; Kaschani, F.; Mach, L.; Van der Hoorn, R. A. L.: Post-Translational Regulation and Trafficking of the Granulin-Containing Protease RD21 of Arabidopsis thaliana. PLoS One 7 (3), e32422 (2012)

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Gyetvai, G.; Sonderkaer, M.; Goebel, U.; Basekow, R.; Ballvora, A.; Imhoff, M.; Kersten, B.; Nielsen, K.; Gebhardt, C.: The Transcriptome of Compatible and Incompatible Interactions of Potato (Solanum tuberosum) with Phytophthora infestans Revealed by DeepSAGE Analysis. PLoS One 7 (2), e31526 (2012)

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Hajheidrai, M.; Farrona, S.; Huettel, B.; Koncz, Z.; Koncz, C.: CDKF;1 and CDKD Protein Kinases Regulate Phosphorylation of Serine Residues in the C-Terminal Domain of Arabidopsis RNA Polymerase II. Plant Cell 24 (4), pp. 1626 - 1642 (2012)

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Hartwig, B.; James, G. V.; Konrad, K.; Schneeberger, K.; Turck, F.: Fast Isogenic Mapping-by-Sequencing of Ethyl Methanesulfonate-Induced Mutant Bulks. Plant Physiology 160 (2), pp. 591 - 600 (2012)

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He, F.; Zhang, X.; Hu, J. Y.; Turck, F.; Dong, X.; Goebel, U.; Borevitz, J.; de Meaux, J.: Widespread interspecific divergence in cis-regulation of transposable elements in the Arabidopsis genus. Molecular Biology & Evolution 29, pp. 1081 - 1091 (2012)

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He, F.; Zhang, X.; Hu, J.; Turck, F.; Dong, X.; Goebel, U.; Borevitz, J.; de Meaux, J.: Genome-wide Analysis of Cis-regulatory Divergence between Species in the Arabidopsis Genus. Molecular Biology and Evolution 29 (11), pp. 3385 - 3395 (2012)

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Heidrich, K.; Blanvillain-Baufumé, S.; Parker, J. E.: Molecular and spatial constraints on NB-LRR receptor signaling. Current Opinion in Plant Biology 15 (4), pp. 385 - 391 (2012)

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Herrero, E.; Davis, S. J.: Time for a Nuclear Meeting: Protein Trafficking and Chromatin Dynamics Intersect in the Plant Circadian System. Molecular Plant 5 (3), pp. 554 - 565 (2012)

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Herrero, E.; Kolmos, E.; Bujdoso, N.; Yuan, Y.; Wang, M.; Berns, M. C.; Uhlworm, H.; Coupland, G.; Saini, R.; Jaskolski, M. et al.; Webb, A.; Goncalves, J.; Davis, S. J.: EARLY FLOWERING4 Recruitment of EARLY FLOWERING3 in the Nucleus Sustains the Arabidopsis Circadian Clock. Plant Cell 24 (2), pp. 428 - 443 (2012)

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Hoerger, A. C.; Ilyas, M.; Stephan, W.; Tellier, A.; Van der Hoorn, R. A. L.; Rose, L. E.: Balancing Selection at the Tomato RCR3 Guardee Gene Family Maintains Variation in Strength of Pathogen Defense. PLoS Genetics 8 (7), e1002813 (2012)

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Huang, X.; Effgen, S.; Meyer, R. C.; Theres, K.; Koornneef, M.: Epistatic Natural Allelic Variation Reveals a Function of AGAMOUS-LIKE6 in Axillary Bud Formation in Arabidopsis. Plant Cell 24 (6), pp. 2364 - 2379 (2012)

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Karl, R.; Kiefer, C.; Ansell, S. W.; Koch, M. A.: SYSTEMATICS AND EVOLUTION OF ARCTIC-ALPINE ARABIS ALPINA (BRASSICACEAE) AND ITS CLOSEST RELATIVES IN THE EASTERN MEDITERRANEAN. American Journal of Botany 99 (4), pp. 778 - 794 (2012)

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Kaschani, F.; Clerc, J.; Krahn, D.; Bier, D.; Hong, T. N.; Ottmann, C.; Niessen, S.; Colby, T.; Van der Hoorn, R. A. L.; Kaiser, M.: Identification of a Selective, Activity-Based Probe for Glyceraldehyde 3-Phosphate Dehydrogenases. Angewandte Chemie-International Edition in English 51 (21), pp. 5230 - 5233 (2012)

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MPIPZ Scientific Publications since 2002

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