MPIPZ Scientific Publications since 2002

Journal Article (2158)

Journal Article
Acevedo Garcia, J.; Walden, K.; Leissing, F.; Baumgarten, K.; Drwiega, K.; Kwaaitaal, M.; Reinstadler, A.; Freh, M.; Dong, X.; James, G. V. et al.; Baus, L. C.; Mascher, M.; Stein, N.; Schneeberger, K.; Brocke-Ahmadinejad, N.; Kollmar, M.; Schulze-Lefert, P.; Panstruga, R.: Barley Ror1 encodes a class XI myosin required for mlo-based broad-spectrum resistance to the fungal powdery mildew pathogen. The Plant Journal (2022)
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Almario, J.; Mahmoudi, M.; Kroll, S.; Agler, M.T.; Placzek, A.; Mari, A.; Kemen, E.: The Leaf Microbiome of Arabidopsis Displays Reproducible Dynamics and Patterns throughout the Growing Season. mBio 13 (3) (2022)
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Amanda, D.; Frey, F. P.; Neumann, U.; Przybyl, M.; Šimura, J.; Zhang, Y.; Chen, Z.; Gallavotti, A.; Fernie, A. R.; Ljung, K. et al.; Acosta, I. F.: Auxin boosts energy generation pathways to fuel pollen maturation in barley. Current Biology (2022)
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Bonthala, V. S.; Stich, B.: Genetic Divergence of Lineage-Specific Tandemly Duplicated Gene Clusters in Four Diploid Potato Genotypes. Frontiers in Plant Science 13, 875202 (2022)
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Bourceret, A.; Guan, R.; Dorau, K.; Mansfeldt, T.; Omidbakhshfard, A.; Medeiros, D. B.; Fernie, A. R.; Hofmann, J.; Sonnewald, U.; Mayer, J. et al.; Gerlach, N.; The RECONSTRUCT consortium; Bucher, M.; Garrido Oter, R.; Spaepen, S.; Schulze-Lefert, P.: Maize Field Study Reveals Covaried Microbiota and Metabolic Changes in Roots over Plant Growth. mBio, e02584-21 (2022)
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Bowman, J. L.; Arteaga-Vazquez, M.; Berger, F.; Briginshaw, L. N.; Carella, P.; Aguilar-Cruz, A.; Davies, K. M.; Dierschke, T.; Dolan, L.; Dorantes-Acosta, A. E. et al.; Fisher, T. J.; Flores-Sandoval, E.; Futagami, K.; Ishizaki, K.; Jibran, R.; Kanazawa, T.; Kato, H.; Kohchi, T.; Levins, J.; Lin, S.-S.; Nakagami, H.; Nishihama, R.; Romani, F.; Schornack, S.; Tanizawa, Y.; Tsuzuki, M.; Ueda, T.; Watanabe, Y.; Yamato, K. T.; Zachgo, S.: The renaissance and enlightenment of Marchantia as a model system. Plant Cell 27, pp. 3512 - 3542 (2022)
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Casale, F.; Van Inghelandt, D.; Weisweiler, M.; Li, J. Q.; Stich, B.: Genomic prediction of the recombination rate variation in barley - A route to highly recombinogenic genotypes. Plant Biotechnology Journal 20, pp. 676 - 690 (2022)
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Chandrasekar, B.; Wanke, A.; Wawra, S.; Saake, P.; Mahdi, L.; Charura, N.; Neidert, M.; Poschmann, G.; Malisic, M.; Thiele, M. et al.; Stuehler, K.; Dama, M.; Pauly, M.; Zuccaro, A.: Fungi hijack a ubiquitous plant apoplastic endoglucanase to release a ROS scavenging beta-glucan decasaccharide to subvert immune responses. Plant Cell 34 (7), pp. 2765 - 2784 (2022)
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Copeland, C.: The feeling is mutual: Increased host putrescine biosynthesis promotes both plant and endophyte growth. Plant Physiology 188 (4), pp. 1939 - 1941 (2022)
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Dongus, J. A.; Bhandari, D. D.; Penner, E.; Lapin, D.; Stolze, S. C.; Harzen, A.; Patel, M.; Archer, L.; Dijkgraaf, L.; Shah, J. et al.; Nakagami, H.; Parker, J. E.: Cavity surface residues of PAD4 and SAG101 contribute to EDS1 dimer signaling specificity in plant immunity. The Plant Journal 110 (5), pp. 1415 - 1432 (2022)
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Durán, P.; Ellis, T. J.; Thiergart, T.; Agren, J.; Hacquard, S.: Climate drives rhizosphere microbiome variation and divergent selection between geographically distant Arabidopsis populations. New Phytologist 236, pp. 608 - 621 (2022)
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Durán, P.; Flores-Uribe, J.; Wippel, K.; Zhang, P.; Guan, R.; Guan, R.; Melkonian, B.; Melkonian, M.; Garrido Oter, R.; Zhang, P.: Shared features and reciprocal complementation of the Chlamydomonas and Arabidopsis microbiota. Nature Communications 13 (406) (2022)
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Durand, S.; Lian, Q.; Jing. J., J.; Ernst, M.; Grelon, M.; Zwicker, D.; Mercier, R.: Joint control of meiotic crossover patterning by the synaptonemal complex and HEI10 dosage. Nature Communications 13, 5999 (2022)
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Emonet, A.; Hay, A.: Development and diversity of lignin patterns. Plant Physiology 190 (1), pp. 31 - 43 (2022)
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Flood, P. J.; Nowrousian, M.; Huettel, B.; Woehle, C.; Becker, K.; Wollenweber, T. E.; Begerow, D.; Grefen, C.: Draft genome of the aardaker (Lathyrus tuberosus L.), a tuberous legume. BMC genomic data 23 (1), 70 (2022)
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Foerderer, A.; Li, E.; Lawson, A. W.; Deng, Y.-N.; Sun, Y.; Logemann, E.; Zhang, X.; Wen, J.; Han, Z.; Chang, J. et al.; Chen, Y.; Schulze-Lefert, P.; Chai, J.: A wheat resistosome defines common principles of immune receptor channels. Nature 610, pp. 532 - 539 (2022)
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Foerderer, A.; Yu, D.; Li, E.; Chai, J.: Resistosomes at the interface of pathogens and plants. Current Opinion in Plant Biology 67, 102212 (2022)
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Fuessl, M.; König, A.-C.; Eirich, J.; Hartl, M.; Kleinknecht, L.; Bohne, A.-V.; Harzen, A.; Kramer, K.; Leister, D.; Nickelsen, J. et al.; Finkemeier, I.: Dynamic light- and acetate-dependent regulation of the proteome and lysine acetylome of Chlamydomonas. The Plant Journal 109 (1), pp. 261 - 277 (2022)
Journal Article
Fulgione, A.; Neto, C.; Elfarargi, A. F.; Tergemina, E.; Ansari, S.; Göktay, M.; Dinis, H.; Döring, N.; Flood, P. J.; Rodriguez-Pacheco, S. et al.; Walden, N.; Koch, M.A.; Roux, F.; Hermisson, J.; Hancock, A. M.: Parallel reduction in flowering time from de novo mutations enable evolutionary rescue in colonizing lineages. Nature Communications 13 (1), 1461 (2022)
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Gao, H.; Coupland, C.: PIF4 and CDF2 co-operate to regulate cell elongation in Arabidopsis thaliana. Nature Plants (2022)
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Gao, H.; Song, W.; Severing, E.; Vayssières, A.; Huettel, B.; Franzen, R.; Richter, R.; Chai, J.; Coupland, G.: PIF4 enhances DNA binding by CDF2 to co-regulate target gene expression and promote Arabidopsis hypocotyl cell elongation. Nature Plants 8, pp. 1082 - 1093 (2022)
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Gao, H.; Weng, S.; Severing, E.; Vayssières, A.; Huettel, B.; Franzen, R.; Richter, R.; Chai, J.; Coupland, G.: PIF4 enhances DNA binding of CDF2 to co-regulate target gene expression and promote Arabidopsis hypocotyl cell elongation. Nature Plants 8, pp. 1082 - 1093 (2022)
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Hacquard, S.; Wang, E.; Slater, H.; Martin, F.: Impact of global change on the plant microbiome. Special Issue 234 (6), pp. 1907 - 1909 (2022)
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Hofstatter, P. G.; Thangavel, G.; Lux, T.; Neumann, P.; Vondrak, T.; Novak, P.; Zhang, M.; Costa, L.; Castellani, M.; Scott, A. et al.; Toegelová, H.; Fuchs, J.; Mata-Sucre, Y.; Dias, Y.; Vanzela, A. L. L.; Huettel, B.; Almeida, C. C. S.; Šimková, H.; Souza, G.; Pedrosa-Harand, A.; Macas, J.; Mayer, K. F. X.; Houben, A.; Marques, A.: Repeat-based holocentromeres influence genome architecture and karyotype evolution. Cell (2022)
Journal Article
Huang, S.; Jia, A.; Song, W.; Hessler, G.; Meng, Y.; Sun, Y.; Xu, L.; Laessle, H.; Jirschitzka, J.; Ma, S. et al.; Xiao, Y.; Yu, D.; Hou, J.; Liu, R.; Sun, H.; Liu, X.; Han, Z.; Chang, J.; Parker, J. E.; Chai, J.: Identification and receptor mechanism of TIR-catalyzed small molecules in plant immunity. Science (2022)
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Jia, A.; Huang, S.; Song, W.; Wang, J.; Meng, Y.; Sun, Y.; Xu, L.; Laessle, H.; Jirschitzka, J.; Hou, J. et al.; Zhang, T.; Yu, W.; Hessler, G.; Li, E.; Ma, S.; Yu, D.; Gebauer, J.; Baumann, U.; Liu, X.; Han, Z.; Chang, J.; Parker, J. E.; Chai, J.: TIR-catalyzed ADP-ribosylation reactions produce signaling molecules for plant immunity. Science (2022)
Journal Article
Johanndrees, O.; Baggs, E. L.; Uhlmann, C.; Locci, F.; Laessle, H.; Melkonian, K.; Käufer, K.; Dongus, J. A.; Nakagami, H.; Krasileva, K. V. et al.; Parker, J. E.; Lapin, D.: Variation in plant Toll/Interleukin-1 receptor domain protein dependence on ENHANCED DISEASE SUSCEPTIBILITY 1. Plant Physiology, kiac480 (2022)
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Lapin, D.; Johanndrees, O.; Wu, Z.; Li, X.; Parker, J. E.: Molecular innovations in plant TIR-based immunity signaling. Plant Cell 34, pp. 1479 - 1496 (2022)
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Lebreton, A.; Tang, N.; Kuo, A.; LaButti, K.; Andreopoulos, W.; Drula, E.; Miyauchi, S.; Barry, K.; Clum, A.; Lipzen, A. et al.; Mousain, D.; Ng, V.; Wang, R.; Dai, Y.; Henrissat, B.; Grigoriev, I. V.; Guerin-Laguette, A.; Yu, F.; Martin, F. M.: Comparative genomics reveals a dynamic genome evolution in the ectomycorrhizal milk-cap (Lactarius) mushrooms. New Phytologist 235 (1), pp. 306 - 319 (2022)
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Lian, Q.; Solier, V.; Walkemeier, B.; Durand, S.; Huettel, B.; Schneeberger, K.; Mercier, R.: The megabase-scale crossover landscape is largely independent of sequence divergence. Nature Communications 13 (1), 3828 (2022)
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Liu, S.; Strauss, S.; Adibi, M.; Mosca, G.; Yoshida, S.; Dello Ioio, R.; Runions, A.; Andersen, T. G.; Grossmann, G.; Huijser, P. et al.; Smith, R. S.; Tsiantis, M.: Cytokinin promotes growth cessation in the Arabidopsis root. Current Biology 32 (9), pp. 1974 - 1985 (2022)
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Loo, E.P. -.; Tajima, Y.; Yamada, K.; Kido, S.; Hirase, T.; Ariga, H.; Fujiwara, T.; Tanaka, K.; Taji, T.; Somssich, I. E. et al.; Parker, J. E.; Saijo, Y.: Recognition of Microbe- and Damage-Associated Molecular Patterns by Leucine-Rich Repeat Pattern Recognition Receptor Kinases Confers Salt Tolerance in Plants. Molecular Plant-Microbe Interactions 35 (7), pp. 554 - 566 (2022)
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Ma, K.-W.; Ordon, J.; Schulze-Lefert, P.: Gnotobiotic Plant Systems for Reconstitution and Functional Studies of the Root Microbiota. Current Protocols 2, e362 (2022)
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Majda, M.; Trozzi, N.; Mosca, G.; Smith, R. S.: How Cell Geometry and Cellular Patterning Influence Tissue Stiffness. International Journal of Molecular Sciences 23 (10), 5651 (2022)
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Matsumoto, A.; Schlueter, T.; Melkonian, K.; Takeda, A.; Nakagami, H.; Mine, A.: p A versatile Tn7 transposon-based bioluminescence tagging tool for quantitative and spatial detection of bacteria in plants. Plant Communications 3 (1), 100227 (2022)
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Melkonian, K.; Stolze, S. C.; Harzen, A.; Nakagami, H.: miniTurbo-based interactomics of two plasma membrane-localized SNARE proteins in Marchantia polymorpha. New Phytologist 235 (2), pp. 786 - 800 (2022)
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Meyer, F.; Fritz, A.; Deng, Z.-L.; Koslicki, D.; Lesker, T. R.; Gurevich, A.; Robertson, G.; Alser, M.; Antipov, D.; Beghini, F. et al.; Bertrand, D.; Brito, J. J.; Brown, C. T.; Buchmann, J.; Buluc, A.; Chen, B.; Chikhi, R.; Clausen, P. T. L. C.; Cristian, A.; Dabrowski, P. W.; Darling, A. E.; Egan, R.; Eskin, E.; Georganas, E.; Goltsman, E.; Gray, M. A.; Hansen, L. H.; Hofmeyr, S.; Huang, P.; Irber, L.; Jia, H.; Jorgensen, T. S.; Kieser, S. D.; Klemetsen, T.; Kola, A.; Kolmogorov, M.; Korobeynikov, A.; Kwan, J.; LaPierre, N.; Lemaitre, C.; Li, C.; Limasset, A.; Malcher-Miranda, F.; Mangul, S.; Marcelino, V. R.; Marchet, C.; Marijon, P.; Meleshko, D.; Mende, D. R.; Milanese, A.; Nagarajan, N.; Nissen, J.; Nurk, S.; Oliker, L.; Paoli, L.; Peterlongo, P.; Piro, V. C.; Porter, J. S.; Rasmussen, S.; Rees, E. R.; Reinert, K.; Renard, B.; Robertsen, E. M.; Rosen, G. L.; Ruscheweyh, H.-J.; Sarwal, V.; Segata, N.; Seiler, E.; Shi, L.; Sun, F.; Sunagawa, S.; Sorensen, S. J.; Thomas, A.; Tong, C.; Trajkovski, M.; Tremblay, J.; Uritskiy, G.; Vicedomini, R.; Wang, Z.; Wang, Z.; Wang, Z.; Warren, A.; Willassen, N.; Yelick, K.; You, R.; Zeller, G.; Zhao, Z.; Zhu, S.; Zhu, J.; Garrido-Oter, R.; Gastmeier, P.; Hacquard, S.; Haeussler, S.; Khaledi, A.; Maechler, F.; Mesny, F.; Radutoiu, S.; Schulze-Lefert, P.; Smit, N.; Strowig, T.; Bremges, A.; Sczyrba, A.; McHardy, A. C.: Critical Assessment of Metagenome Interpretation: the second round of challenges. Nature Methods 19 (4), pp. 429 - 440 (2022)
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Modesto, I.; Inacio, V.; Novikova, P. Y.; Carrasquinho, I.; Van de Peer, Y.; Miguel, C. M.: SNP Detection in Pinus pinaster Transcriptome and Association with Resistance to Pinewood Nematode. Forests 13 (6), 946 (2022)
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Ortiz, D.; Chen, J.; Outram, M. A.; Saur, I. M. L.; Upadhyaya, N. M.; Mago, R.; Ericsson, D. J.; Cesari, S.; Chen, C.; Williams, S. J. et al.; Dodds, P. N.: The stem rust effector protein AvrSr50 escapes Sr50 recognition by a substitution in a single surface-exposed residue. New Phytologist 234 (2), pp. 592 - 606 (2022)
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Parker, J. E.; Hessler, G.; Cui, H.: A new biochemistry connecting pathogen detection to induced defense in plants. New Phytologist 234 (3), pp. 819 - 826 (2022)
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Peters, S. A.; Underwood, C. J.: Technology-driven approaches for meiosis research in tomato and wild relatives. Plant Reproduction (2022)
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Platre, M. P.; Satbhai, S. B.; Brent, L.; Gleason, M. F.; Cao, M.; Grison, M.; Glavier, M.; Zhang, L.; Gaillochet, C.; Goeschl, C. et al.; Giovannetti, M.; Enugutti, B.; Neveu, J.; von Reth, M.; Alcázar, R.; Parker, J.; Vert, G.; Bayer, E.; Busch, W.: The receptor kinase SRF3 coordinates iron-level and flagellin dependent defense and growth responses in plants. Nature Communications 13 (1), 4445 (2022)
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Qian, P.; Song, W.; Zaizen-Iida, M.; Kume, S.; Wang, G.; Zhang, Y.; Kinoshita-Tsujimura, K.; Chai, J.; Kakimoto, T.: A Dof-CLE circuit controls phloem organization. Nature Plants 8 (7), pp. 817 - 827 (2022)
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Runge, P.; Ventura, F.; Kemen, E.; Stam, R.: Distinct Phyllosphere Microbiome of Wild Tomato Species in Central Peru upon Dysbiosis. Microbial Ecology (2022)
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Sang, Q.; Vayssières, A.; O'Maoiléidigh, D. S.; Yang, X.; Vincent, C.; Garica de Ollala, E. B.; Cerise, M.; Franzen, R.; Coupland, G.: MicroRNA172 controls inflorescence meristem size through regulation of APETALA2 in Arabidopsis. New Phytologist 235 (1), pp. 356 - 371 (2022)
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Saur, , I. M. L.; Lawson, A. W.; Schulze-Lefert, P.: Buy one, get two. Nature Plants 8, pp. 100 - 101 (2022)
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Schmitz, R. J.; Marand, A. P.; Zhang, X.; Mosher, R. A.; Turck, F.; Chen, X.; Axtell, M. J.; Zhong, X.; Brady, S. M.; Megraw, M. et al.; Meyers, B. C.: Quality control and evaluation of plant epigenomics data Comment. Plant Cell 34 (1), pp. 503 - 513 (2022)
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Schneider, M.; Casale, F.; Stich, B.: Accurate recombination estimation from pooled genotyping and sequencing: a case study on barley. BMC Genomics 23 (1), 468 (2022)
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Schulten, A.; Pietzenuk, B.; Quintana, J.; Scholle, M.; Feil, R.; Krause, M.; Romera Branchat, M.; Wahl, V.; Severing, E.; Coupland, G. et al.; Kraemer, U.: Energy status-promoted growth and development of Arabidopsis require copper deficiency response transcriptional regulator SPL7. Plant Cell 27, pp. 3873 - 3898 (2022)
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Strauß, S.; Runions, A.; Lane, B.; Eschweiler, D.; Bajpai, N.; Trozzi, N.; Routier-Kierzkowska, A.-L.; Yoshida, S.; Rodrigues da Silveira, S.; Vijayan, A. et al.; Tofanelli, R.; Majda, M.; Echevin, E.; Le Gloanec, C.; Bertrand-Rakusova, H.; Adibi, M.; Schneitz, K.; Bassel, G. W.; Kierzkowski, D.; Stegmaier, J.; Tsiantis, M.; Smith, R. S.: Using positional information to provide context for biological image analysis with MorphoGraphX 2.0. ELIFE 11, e72601 (2022)
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