Scientific Publications since 2002

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Basak, A. K.; Piasecka, A.; Hucklenbroich, J.; Tuerksoy, G. M.; Guan, R.; Zhang, P.; Getzke, F.; Garrido-Oter, R.; Hacquard, S.; Strzalka, K. et al.; Bednarek, P.; Yamada, K.; Nakano, R. T.: ER body-resident myrosinases and tryptophan specialized metabolism modulate root microbiota assembly. New Phytologist 241, pp. 329 - 342 (2024)

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Bohle, F.; Klaus, A.; Ingelfinger, J.; Tegethof, H.; Safari, N.; Schwarzlaender, M.; Hochholdinger, F.; Hahn, M.; Meyer, A. J.; Acosta, I. F. et al.; Mueller-Schuessele, S. J.: Contrasting cytosolic glutathione redox dynamics under abiotic and biotic stress in barley as revealed by the biosensor Grx1-roGFP2. Journal of Experimental Botany 75 (8), pp. 2299 - 2312 (2024)

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Bonthala, V. S.; Stich, B.: StCoExpNet: a global co-expression network analysis facilitates identifying genes underlying agronomic traits in potatoes. Plant Cell Reports 43 (5), 117 (2024)

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Capilla-Perez, L.; Solier, V.; Gilbault, E.; Lian, Q.; Goel, M.; Goel, M.; Huettel, B.; Keurentjes, J. J. B.; Loudet, O.; Mercier, R.: Enhanced recombination empowers the detection and mapping of Quantitative Trait Loci. Communications Biology 7 (1), 829 (2024)

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Castellani, M.; Zhang, M.; Thangavel, G.; Mata Sucre, Y.; Lux, T.; Campoy, J. A.; Marek, M.; Huettel, B.; Sun, H.-Q.; Mayer, K. F. X. et al.; Schneeberger, K.; Marques, A.: Meiotic recombination dynamics in plants with repeat-based holocentromeres shed light on the primary drivers of crossover patterning. Nature Plants (2024)

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Cosenza, F.; Shrestha, A.; Van Inghelandt, D.; Casale, F. A.; Wu, P.-Y.; Weisweiler, M.; Li, J. Q.; Wespel, F.; Stich, B.: Genetic mapping reveals new loci and alleles for flowering time and plant height using the double round-robin population of barley. Journal of Experimental Botany 75 (8), pp. 2385 - 2402 (2024)

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Cui, S.; Song, P.; Wang, C.; Chen, S.; Hao, B.; Xu, Z.; Cai, L.; Chen, X.; Zhu, S.; Gan, X. et al.; Dong, H.; Hu, Y.; Zhou, L.; Hou, H.; Tian, Y.; Liu, X.; Chen, L.; Liu, S.; Jiang, L.; Wang, H.; Jia, G.; Zhou, S.; Wan, J.: The RNA binding protein EHD6 recruits the m 6 A reader YTH07 and sequesters OsCOL4 mRNA into phase-separated ribonucleoprotein condensates to promote rice flowering. Molecular Plant 17 (6), pp. 935 - 954 (2024)

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Cullen, E.; Hay, A.: Creating an explosion: Form and function in explosive fruit. Current Opinion in Plant Biology 79, 102543 (2024)

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de Melo, S. M. F.; Marques, A.; Almeida, C.: The mitochondrial genome sequence of Syagrus coronata (Mart.) Becc. (Arecaceae) is characterized by gene insertion within intergenic spaces. Tree Genetics & Genomes 20 (2), 10 (2024)

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de Souza, F. D.; Marques, A.; Almeida, C.: Mitochondrial genome of Hancornia speciosa gomes: intergenic regions containing retrotransposons and predicted genes. Molecular Biology Reports 51 (1), 132 (2024)

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Dias, Y.; Mata Sucre, Y.; Thangavel, G.; Costa, L.; Báez, M.; Houben, A.; Marques, A.; Pedrosa-Harand, A.: How diverse a monocentric chromosome can be? Repeatome and centromeric organization of Juncus effusus (Juncaceae). The Plant Journal (2024)

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Emonet, A.; Awad, M.; Tikhomirov, N.; Vasilarou, M.; Pérez Antón, M.; Gan, X.; Novikova, P. Y.; Hay, A.: Polyploid genome assembly of Cardamine chenopodiifolia. bioRxiv: the preprint server for biology (2024)

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pre-print

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Emonet, A.; Pérez Antón, M.; Neumann, U.; Dunemann, S.; Huettel, B.; Koller, R.; Hay, A.: Amphicarpic development in the emerging model organism Cardamine chenopodiifolia. bioRxiv: the preprint server for biology (2024)

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Entila, F.; Han, X.; Mine, A.; Schulze-Lefert, P.; Tsuda, K.: Commensal lifestyle regulated by a negative feedback loop between Arabidopsis ROS and the bacterial T2SS. Nature Communications 15 (1), 456 (2024)

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Fernandes, J. B.; Naish, M.; Lian, Q.; Burns, R.; Tock, A. J.; Rabanal, F. A.; Wlodzimierz, P.; Habring, A.; Nicholas, R. E.; Weigel, D. et al.; Mercier, R.; Henderson, I. R.: Structural variation and DNA methylation shape the centromere-proximal meiotic crossover landscape in Arabidopsis. Genome Biology 25 (1), 30 (2024)

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Freh, M.; Reinstaedler, A.; Neumann, K. D.; Neumann, U.; Panstruga, R.: The development of pleiotropic phenotypes in powdery mildew-resistant barley and Arabidopsis thaliana mlo mutants is linked to nitrogen availability. Plant, Cell and Environment 47 (7), pp. 2362 - 2376 (2024)

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Fuster-Pons, A.; Murillo-Sanchez, A.; Mendez-Vigo, B.; Marcer, A.; Pieper, B.; Torres-Perez, R.; Oliveros, J. C.; Tsiantis, M.; Pico, F. X.; Alonso-Blanco, C.: The trichome pattern diversity of Cardamine shares genetic mechanisms with Arabidopsis but differs in environmental drivers. Plant Physiology, kiae213 (2024)

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Getzke, F.; Wang, L.; Chesneau, G.; Böhringer, N.; Mesny, F.; Denissen, N.; Wesseler, H.; Adisa, P. T.; Marner, M.; Schulze-Lefert, P. et al.; Schäberle, T. F.; Hacquard, S.: Physiochemical interaction between osmotic stress and a bacterial exometabolite promotes plant disease. Nature Communications 15, 4438 (2024)

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Grones, C.; Eekhout, T.; Shi, D.; Neumann, M.; Berg, L. S.; Ke, Y.; Shahan, R.; Cox, K. L.; Gomez-Cano, F.; Nelissen, H. et al.; Lohmann, J. U.; Giacomello, S.; Martin, O. C.; Cole, B.; Wang, J.-W.; Kaufmann, K.; Raissig, M. T.; Palfalvi, G.; Greb, T.; Libault, M.; De Rybel, B.: Best practices for the execution, analysis, and data storage of plant single-cell/nucleus transcriptomics. The Plant Cell, koae003, pp. 1 - 17 (2024)

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Hu, Z.; Wilson Sánchez, D.; Bhatia, N.; Rast, M. I.; Wu, A.; Vlad, D.; McGuire, L.; Nikolov, L. A.; Laufs, P.; Gan, X. et al.; Laurent, S.; Runions, A.; Tsiantis, M.: A CUC1/auxin genetic module links cell polarity to patterned tissue growth and leaf shape diversity in crucifer plants. PNAS 121 (26), e2321877121 (2024)

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Huang, L.; Oekmen, B.; Stolze, S. C.; Kastl, M.; Khan, M.; Hilbig, D.; Nakagami, H.; Djamei, A.; Doehlemann, G.: The fungal pathogen Ustilago maydis targets the maize corepressor RELK2 to modulate host transcription for tumorigenesis. New Phytologist 241 (4), pp. 1747 - 1762 (2024)

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Kim, H.; Kim, J.; Son, N.; Kuo, P.; Morgan, C.; Chambon, A.; Byun, D.; Park, J.; Lee, Y.; Park, Y. M. et al.; Fozard, J. A.; Guérin, J.; Hurel, A.; Lambing, C.; Howard, M.; Hwang, I.; Mercier, R.; Grelon, M.; Henderson, I. R.; Choi, K.: Control of meiotic crossover interference by a proteolytic chaperone network. Nature Plants 10, pp. 453 - 468 (2024)

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Klug, K.; Zhu, P.; Pattar, P.; Mueller, T.; Safari, N.; Sommer, F.; Valero-Jimenez, C. A.; van Kan, J. A. L.; Huettel, B.; Stueber, K. et al.; Scheuring, D.; Schroda, M.; Hahn, M.: Genome Comparisons between Botrytis fabae and the Closely Related Gray Mold Fungus Botrytis cinerea Reveal Possible Explanations for Their Contrasting Host Ranges. Journal of Fungi 10 (3), 216 (2024)

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Kuo, Y.-T.; Kurian, J. G.; Schubert, V.; Fuchs, J.; Melzer, M.; Muraleedharan, A.; Maruthachalam, R.; Houben, A.: The holocentricity in the dioecious nutmeg Myristica fragrans is not based on major satellite repeats. Chromosome Research 32 (2), 8 (2024)

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Kuo, Y.-T.; Schubert, V.; Marques, A.; Schubert, I.; Houben, A.: Centromere diversity: How different repeat-based holocentromeres may have evolved. Bioessays 46 (6), e2400013 (2024)

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Li, X.-M.; Jenke, H.; Strauss, S.; Bazakos, C.; Mosca, G.; Lymbouridou, R.; Kierzkowski, D.; Neumann, U.; Naik, P.; Huijser, P. et al.; Laurent, S.; Smith, R. S.; Runions, A.; Tsiantis, M.: Cell-cycle-linked growth reprogramming encodes developmental time into leaf morphogenesis. Current Biology 34, pp. 541 - 556.e515 (2024)

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Lian, Q.; Huettel, B.; Walkemeier, B.; Mayjonade, B.; Lopez-Roques, C.; Gil, L.; Roux, F.; Schneeberger, K.; Mercier, R.: A pan-genome of 69 Arabidopsis thaliana accessions reveals a conserved genome structure throughout the global species range. Nature Genetics 56, pp. 982 - 991 (2024)

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Lian, Q.; Mercier, R.: Constants and variations in 69 diverse genomes of Arabidopsis thaliana. Nature Genetics 56 (5), pp. 748 - 749 (2024)

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Locci, F.; Parker, J. E.: Plant NLR immunity activation and execution: a biochemical perspective. Open Biology 14 (1), 230387 (2024)

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Loo, E. P. I.; Durán, P.; Pang, T. Y.; Westhoff, P.; Deng, C.; Durán, C.; Lercher, M.; Garrido Oter, R.; Frommer, W. B.: Sugar transporters spatially organize microbiota colonization along the longitudinal root axis of Arabidopsis. Cell Host & Microbe 32 (4), pp. 543 - 556.e6 (2024)

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López, H.; Mercier, R.: The silk moth and the elephant. Current Biology 34 (11), pp. R211 - R213 (2024)

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Ma, S.; An, C.; Lawson, A. W.; Cao, Y.; Sun, Y.; Tan, E. Y. J.; Pan, J.; Jirschitzka, J.; Kümmel, F.; Mukhi, N. et al.; Han, Z.; Feng, S.; Wu, B.; Schulze-Lefert, P.; Chai, J.: Oligomerization-mediated autoinhibition and cofactor binding of a plant NLR. Nature (2024)

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Ma, X.; Vanneste, S.; Chang, J.; Ambrosino, L.; Barry, K.; Bayer, T.; Bobrov, A. A.; Boston, L. B.; Campbell, J. E.; Chen, H. et al.; Chiusano, M. L.; Dattolo, E.; Grimwood, J.; He, G.; Jenkins, J.; Khachaturyan, M.; Marin-Guirao, L.; Mesterhazy, A.; Muhd, D.-D.; Pazzaglia, J.; Plott, C.; Rajasekar, S.; Rombauts, S.; Ruocco, M.; Scott, A. D.; Tan, M. P.; Van de Velde, J. D.; Vanholme, B.; Webber, J.; Wong, L. L.; Yan, M.; Sung, Y. Y.; Novikova, P. Y.; Schmutz, J.; Reusch, T. B. H.; Procaccini, G.; Olsen, J. L.; Van de Peer, Y.: Seagrass genomes reveal ancient polyploidy and adaptations to the marine environment. Nature Plants 10, pp. 240 - 255 (2024)

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Manosalva Perez, N.; Ferrari, C.; Engelhorn, J.; Depuydt, T.; Nelissen, H.; Hartwig, T.; Vandepoele, K.: MINI-AC: inference of plant gene regulatory networks using bulk or single-cell accessible chromatin profiles. The Plant Journal 117 (1), pp. 280 - 301 (2024)

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Mata Sucre, Y.; Parteka, L. M.; Ritz, C. M.; Gatica-Arias, A.; Félix, L. P.; Thomas, W. W.; Souza, G.; Vanzela, A. .. L.; Pedrosa-Harand, A.; Marques, A.: Oligo-barcode illuminates holocentric karyotype evolution in Rhynchospora (Cyperaceae). Frontiers in Plant Science 7 (15), 1330927 (2024)

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Mishra, P.; Roggen, A.; Ljung, K.; Albani, M.; Vayssières, A.: Adventitious rooting in response to long-term cold: a possible mechanism of clonal growth in alpine perennials. Frontiers in Plant Science 15, 1352830 (2024)

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Mosca, G.; Eng, R. C.; Adibi, M.; Yoshida, S.; Lane, B.; Bergheim, L.; Weber, G.; Smith, R. S.; Hay, A.: Growth and tension in explosive fruit. Current Biology (2024)

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Oliveira, L.; Neumann, P.; Mata Sucre, Y.; Kuo, Y.-T.; Marques, A.; Schubert, V.; Macas, J.: KNL1 and NDC80 represent new universal markers for the detection of functional centromeres in plants. Chromosome Research 32 (1), 3 (2024)

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Ordon, J.; Thouin, J.; Nakano, R. T.; Ma, K.-W.; Zhang, P.; Huettel, B.; Garrido Oter, R.; Schulze-Lefert, P.: Chromosomal barcodes for simultaneous tracking of near-isogenic bacterial strains in plant microbiota. Nature Microbiology (2024)

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Peckham, M.; Neumann, U.; Culley, S.: Introduction to women in microscopy: Volume 2. Special Issue 295 (1), pp. 3 - 5 (2024)

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Regmi, K. C.; Ghosh, S.; Koch, B.; Neumann, U.; Stein, B.; O'Connell, R. J.; Innes, R. W.: Three-Dimensional Ultrastructure of Arabidopsis Cotyledons Infected with Colletotrichum higginsianum. Molecular Plant-Microbe Interactions 37 (4), pp. 396 - 406 (2024)

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Sajeev, N.; Koornneef, M.; Bentsink, L.: A commitment for life: Decades of unraveling the molecular mechanisms behind seed dormancy and germination. The Plant Cell, koad328, pp. 1 - 19 (2024)

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Schmitz, G.; Linstaedter, A.; Frank, A.S. K.; Dittberner, H.; Thome, J.; Schrader, A.; Linne von Berg, K.-H.; Fulgione, A.; Coupland, G.; de Meaux, J.: Environmental filtering of life-history trait diversity in urban populations of Arabidopsis thaliana. Journal of Ecology 112 (1), pp. 14 - 27 (2024)

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Shen, D.; Wippel, K.; Remmel, S.; Zhang, Y.; Kuertoes, N.; Neumann, U.; Kopriva, S.; Andersen, T. G.: The Arabidopsis SGN3/GSO1 receptor kinase integrates soil nitrogen status into shoot development. The EMBO Journal 43, pp. 2486 - 2505 (2024)

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Shen, Q.; Hasegawa, K.; Oelerich, N.; Prakken, A.; Tersch, L. W.; Wang, J.; Reichhardt, F.; Tersch, A.; Choo, J. C.; Timmers, T. et al.; Hofmann, K.; Parker, J. E.; Chai, J.; Maekawa, T.: Cytoplasmic calcium influx mediated by plant MLKLs confers TNL-triggered immunity. Cell Host & Microbe 32, pp. P453 - 465.e6 (2024)

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Somssich, M.: From the archives: male-female communication, glue that keeps cells together, and a SUPERMAN for all flowering plants. The Plant Cell, pp. 795 - 796 (2024)

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Song, W.; Liu, L.; Yu, D.; Bernardy, H.; Jirschitzka, J.; Huang, S.; Jia, A.; Jemielniak, W.; Acker, J.; Laessle, H. et al.; Wang, J.; Shen, Q.-H.; Chen, W.; Li, P.; Parker, J. E.; Han, Z.; Schulze-Lefert, P.; Chai, J., J.: Substrate-induced condensation activates plant TIR domain proteins. Nature 627 (8005), pp. 847 - 853 (2024)

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Vadde, B. V. L.; Russell, N. J.; Bagde, S. R.; Askey, B.; Saint-Antoine, M.; Brownfield, B.; Mughal, S.; Apprill, L. E.; Khosla, A.; Clark, F. K. et al.; Schwarz, E. M.; Alseekh, S.; Alisdair R. Fernie, A. R.; Singh, A.; Schrick, K.; Fromme, J. C.; Skirycz, A.; Formosa-Jordan, P.; Roeder, A. H. K.: The transcription factor ATML1 maintains giant cell identity by inducing synthesis of its own long-chain fatty acid-containing ligands. bioRxiv: the preprint server for biology, 2024.03.14.58469 (2024)

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Valasiadis, D.; Kollaros, M. G.; Michailidis, M.; Polychroniadou, C.; Tanou, G.; Bazakos, C.; Molassiotis, A.: Wide-characterization of high and low dry matter kiwifruit through spatiotemporal multi-omic approach. Postharvest Biology and Technology 209, 112727 (2024)

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Wang, D.; Wei, L.; Ma, J.; Wan, Y.; Huang, K.; Sun, Y.; Wen, H.; Chen, Z.; Li, Z.; Yu, D. et al.; Cui, H.; Wu, J.; Wu, Y.; Kim, S. T.; Zhao, J.; Parker, J.; Tsuda, K.; Jiang, C.; Wang, Y.: Bacillus cereus NJ01 induces SA- and ABA-mediated immunity against bacterial pathogens through the EDS1-WRKY18 module. Cell Reports 43 (4), 113985 (2024)

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MPIPZ Scientific Publications since 2002

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