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Journal Article (61)
Journal Article
21 (1), 306 (2020)
Gamete binning: chromosome-level and haplotype-resolved genome assembly enabled by high-throughput single-cell sequencing of gamete genomes. Genome Biology and Evolution
Journal Article
30 (9), pp. 1740 - 1747.e6 (2020)
Bacterial Infection Disrupts Clock Gene Expression to Attenuate Immune Responses. Current Biology
Journal Article
6, pp. 13 - 21 (2020)
Reciprocal cybrids reveal how organellar genomes affect plant phenotypes. Nature Plants
Journal Article
11 (1), 989 (2020)
Chromosome-level assemblies of multiple Arabidopsis genomes reveal hotspots of rearrangements with altered evolutionary dynamics. Nature Communications
Journal Article
Mutagenesis of a Quintuple Mutant Impaired in Environmental Responses Reveals Roles for CHROMATIN REMODELING4 in the Arabidopsis Floral Transition. The Plant Cell (2020)
Journal Article
11 (1), 253 (2020)
Extreme genetic signatures of local adaptation during Lotus japonicus colonization of Japan. Nature Communications
Journal Article
116 (24), pp. 12078 - 12083 (2019)
Genetic and molecular analysis of trichome development in Arabis alpina. Proceedings of the National Academy of Sciences of the United States of America
Journal Article
28 (17), pp. 3887 - 3901 (2019)
Strengths and potential pitfalls of hay transfer for ecological restoration revealed by RAD-seq analysis in floodplain Arabis species. Molecular Ecology
Journal Article
5 (8), pp. 846 - 855 (2019)
Interspecies association mapping links reduced CG to TG substitution rates to the loss of gene-body methylation. Nature Plants
Journal Article
8 (12), 599 (2019)
The Striking Flower-in-Flower Phenotype of Arabidopsis thaliana Nossen (No-0) is Caused by a Novel LEAFY Allele. PLANTS-BASEL
Journal Article
Mutations in the miR396 binding site of the growth-regulating factor gene VvGRF4 modulate inflorescence architecture in grapevine. The Plant Journal (2019)
Journal Article
10, 4310 (2019)
Linked-read sequencing of gametes allows efficient genome-wide analysis of meiotic recombination. Nature Communications
Journal Article
30 (11), pp. 2838 - 2854 (2018)
The U1 snRNP Subunit LUC7 Modulates Plant Development and Stress Responses via Regulation of Alternative Splicing. The Plant Cell
Journal Article
Reciprocal cybrids reveal how organellar genomes affect plant phenotypes. bioRxiv, 477687 (2018)
Journal Article
28 (2), pp. 303 - 310.e3 (2018)
Brassinosteroids Dominate Hormonal Regulation of Plant Thermomorphogenesis via BZR1. Current Biology
Journal Article
34 (4), pp. 550 - 557 (2018)
findGSE: estimating genome size variation within human and Arabidopsis using k-mer frequencies. Bioinformatics
Journal Article
Linked-read sequencing of gametes allows efficient genome-wide analysis of meiotic recombination. bioRxiv, 484022 (2018)
Journal Article
27 (5), pp. 778 - 786 (2017)
Improving and correcting the contiguity of long-read genome assemblies of three plant species using optical mapping and chromosome conformation capture data. Genome Research
Journal Article
36, pp. 64 - 70 (2017)
The impact of third generation genomic technologies on plant genome assembly. Current Opinion in Plant Biology
Journal Article
36, pp. IV - V (2017)
Editorial overview: Genome studies and molecular genetics. Current Opinion in Plant Biology
Journal Article
114 (18), pp. 4833 - 4838 (2017)
Ctf4-related protein recruits LHP1-PRC2 to maintain H3K27me3 levels in dividing cells in Arabidopsis thaliana. Proceedings of the National Academy of Sciences of the United States of America
Journal Article
113 (32), pp. 9111 - 9116 (2016)
On the origin and evolutionary consequences of gene body DNA methylation. Proceedings of the National Academy of Sciences of the United States of America
Journal Article
11 (6), e0157779 (2016)
cDNA Library Enrichment of Full Length Transcripts for SMRT Long Read Sequencing. PLoS One
Journal Article
88 (2), pp. 159 - 178 (2016)
Molecular, genetic and evolutionary analysis of a paracentric inversion in Arabidopsis thaliana. The Plant Journal
Journal Article
7, 13299 (2016)
A multi-marker association method for genome-wide association studies without the need for population structure correction. Nature Communications
Journal Article
2 (2), 16003 (2016)
Plant genic methylation: Conserved for 400 million years. Nature Plants
Journal Article
12 (4), e1005990 (2016)
Arabidopsis thaliana DM2h (R8) within the Landsberg RPP1-like Resistance Locus Underlies Three Different Cases of EDS1-Conditioned Autoimmunity. PLoS Genetics
Journal Article
7, 13522 (2016)
UVR2 ensures transgenerational genome stability under simulated natural UV-B in Arabidopsis thaliana. Nature Communications
Journal Article
113 (28), pp. E4052 - E4060 (2016)
Chromosome-level assembly of Arabidopsis thaliana Ler reveals the extent of translocation and inversion polymorphisms. Proceedings of the National Academy of Sciences of the United States of America
Journal Article
28 (1), pp. 87 - 101 (2016)
Complementary Activities of TELOMERE REPEAT BINDING Proteins and Polycomb Group Complexes in Transcriptional Regulation of Target Genes. Plant Cell
Journal Article
169 (3), pp. 2187 - 99 (2015)
Floral Induction in Arabidopsis by FLOWERING LOCUS T Requires Direct Repression of BLADE-ON-PETIOLE Genes by the Homeodomain Protein PENNYWISE. Plant physiology
Journal Article
350 (6267), pp. 1521 - 1524 (2015)
Rice perception of symbiotic arbuscular mycorrhizal fungi requires the karrikin receptor complex. Science Magazine
Journal Article
11 (1), e1004920 (2015)
Century-scale Methylome Stability in a Recently Diverged Arabidopsis thaliana Lineage. PLOS GENETICS
Journal Article
11 (12), e1005660 (2015)
Kicking against the PRCs - A Domesticated Transposase Antagonises Silencing Mediated by Polycomb Group Proteins and Is an Accessory Component of Polycomb Repressive Complex 2. PLoS Genetics
Journal Article
168, pp. 814 - 827 (2015)
Mutant allele-specific uncoupling of PEN3 functions reveals engagement of the ABC transporter in distinct tryptophan metabolic pathways. Plant Physiology
Journal Article
16, 31 (2015)
Combinatorial activities of SHORT VEGETATIVE PHASE and FLOWERING LOCUS C define distinct modes of flowering regulation in Arabidopsis. Genome Biology
Journal Article
5 (3), pp. 385 - 398 (2015)
Rapid and Inexpensive Whole-Genome Genotyping-by-Sequencing for Crossover Localization and Fine-Scale Genetic Mapping. G3-GENES GENOMES GENETICS
Journal Article
1284, pp. 381 - 95 (2015)
SHOREmap v3.0: fast and accurate identification of causal mutations from forward genetic screens. Methods in molecular biology (Clifton, N.J.)
Journal Article
1 (2), UNSP 14023, pp. 1 - 7 (2015)
Genome expansion of Arabis alpina linked with retrotransposition and reduced symmetric DNA methylation. Nature Plants
Journal Article
46 (9), pp. 1034 - 1038 (2014)
The genome of the stress-tolerant wild tomato species Solanum pennellii. Nature Reviews Genetics
Journal Article
9 (6), pp. 1983 - 1989 (2014)
The DET1-COP1-HY5 Pathway Constitutes a Multipurpose Signaling Module Regulating Plant Photomorphogenesis and Thermomorphogenesis. CELL REPORTS
Journal Article
5, 4276 (2014)
CHOLINE TRANSPORTER-LIKE1 is required for sieve plate development to mediate long-distance cell-to-cell communication. Nature Communications
Journal Article
201 (3), pp. 810 - 824 (2014)
Towards the discovery of novel genetic component involved in stress resistance in Arabidopsis thaliana. New Phytologist
Journal Article
26 (9), pp. 3680 - 3692 (2014)
Arabidopsis thaliana RNase H2 Deficiency Counteracts the Needs for the WEE1 Checkpoint Kinase but Triggers Genome Instability. The Plant Cell
Journal Article
198 (1), pp. 383 - 396 (2014)
Mapping-by-Sequencing Identifies HvPHYTOCHROME C as a Candidate Gene for the early maturity 5 Locus Modulating the Circadian Clock and Photoperiodic Flowering in Barley. Genetics
Journal Article
166 (3), pp. 1280 - 1287 (2014)
Rapid Identification of a Natural Knockout Allele of ARMADILLO REPEAT-CONTAINING KINESIN1 That Causes Root Hair Branching by Mapping-By-Sequencing. Plant Physiology
Journal Article
15 (10), pp. 662 - 676 (2014)
Using next-generation sequencing to isolate mutant genes from forward genetic screens. Nature Reviews Genetics
Journal Article
68 (9), pp. 2701 - 2708 (2014)
A SHIFT FROM MAGNITUDE TO SIGN EPISTASIS DURING ADAPTIVE EVOLUTION OF A BACTERIAL SOCIAL TRAIT. EVOLUTION
Journal Article
340 (6136), pp. 1094 - 1097 (2013)
Mechanisms of Age-Dependent Response to Winter Temperature in Perennial Flowering of Arabis alpina. Science
Journal Article
14 (6), R61 (2013)
User guide for mapping-by-sequencing in Arabidopsis. GENOME BIOLOGY