Journal Article (2278)

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Giaume, F.; Bono, G. A.; Martignago, D.; Miao, Y.; Vicentini, G.; Toriba, T.; Wang, R.; Kong, D.; Cerise, M.; Chirivi, D. et al.; Biancucci, M.; Khahani, B.; Morandini, P.; Tameling, W.; Martinotti, M.; Goretti, D.; Coupland, G.; Kater, M.; Brambilla, V.; Miki, D.; Kyozuka, J.; Fornara, F.: Two florigens and a florigen-like protein form a triple regulatory module at the shoot apical meristem to promote reproductive transitions in rice. Nature Plants 9 (4), pp. 525 - 534 (2023)
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Girard, C.; Zwicker, D.; Mercier, R.: The regulation of meiotic crossover distribution: a coarse solution to a century-old mystery? Biochemical Society Transactions 28 (51), pp. 1179 - 1190 (2023)
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Griebel, T.; Lapin, D.; Locci, F.; Kracher, B.; Bautor, J.; Concia, L.; Benhamed, M.; Parker, J. E.: Arabidopsis Topless-related 1 mitigates physiological damage and growth penalties of induced immunity. New Phytologist 239 (4), pp. 1404 - 1419 (2023)
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Guerreiro, R.; Bonthala, V. S.; Schlueter, U.; Hoang, N. V.; Triesch, S.; Schranz, M. E.; Weber, A. P. M.; Stich, B.: A genomic panel for studying C3-C4 intermediate photosynthesis in the Brassiceae tribe. Plant, Cell and Environment (2023)
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Hartwig, T.; Banf, M.; Prietsch, G. P.; Zhu, J.-Y.; Mora-Ramirez, I.; Schippers, J. H. M.; Snodgrass, S. J.; Seetharam, A. S.; Huettel, B.; Kolkman, J. M. et al.; Yang, J.; Engelhorn, J.; Wang, Z.-Y.: Hybrid allele-specific ChIP-seq analysis identifies variation in brassinosteroid-responsive transcription factor binding linked to traits in maize. Genome Biology and Evolution 24 (1), 108 (2023)
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Huang, S.; Jia, A.; Ma, S.; Sun, Y.; Chang, X.; Han, Z.; Chai, J.: NLR signaling in plants: from resistosomes to second messengers. Trends in biochemical sciences 48 (9), pp. 776 - 787 (2023)
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Ji, C.; Song, F.; He, C.; An, J.; Huang, S.; Yu, H.; Lu, H.; Xiao, S.; Bucher, M.; Pan, Z.: Integrated miRNA-mRNA analysis reveals candidate miRNA family regulating arbuscular mycorrhizal symbiosis of Poncirus trifoliata. Plant, Cell and Environment 46 (6), pp. 1805 - 1821 (2023)
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Johanndrees, O.; Baggs, E. L.; Uhlmann, C.; Locci, F.; Laessle, H.; Melkonian, K.; Käufer, K.; Dongus, J. A.; Nakagami, H.; Krasileva, K. V. et al.; Parker, J. E.; Lapin, D.: Variation in plant Toll/Interleukin-1 receptor domain protein dependence on ENHANCED DISEASE SUSCEPTIBILITY 1. Plant Physiology 191, kiac480, pp. 626 - 642 (2023)
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Johnston-Monje, D.; Vergara, L. I.; Lopez-Mejia, J.; White, J. F.: Plant microbiomes as contributors to agricultural terroir. Frontiers in Agronomy 5, 1216520 (2023)
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Kolesnikova, U. K.; Scott, A. D.; Van den Velde, J. D.; Burns, R.; Tikhomirov, N. P.; Pfordt, U.; Clarke, A. C.; Yant, L.; Seregin, A. P.; Vekemans, X. et al.; Laurent, S.; Novikova, P. Y.: Transition to Self-compatibility Associated With Dominant S-allele in a Diploid Siberian Progenitor of Allotetraploid Arabidopsis kamchatica Revealed by Arabidopsis lyrata Genomes. Molecular Biology and Evolution 40 (7), msad122 (2023)
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Kuo, Y.-T.; Souza Câmara, A.; Schubert, V.; Neumann, P.; Macas, J.; Melzer, M.; Chen, J.; Fuchs, J.; Abel, S.; Klocke, E. et al.; Huettel, B.; Himmelbach, A.; Demidov, D.; Dunemann, F.; Mascher, M.; Ishii, T.; Marques, A.; Houben, A.: Holocentromeres can consist of merely a few megabase-sized satellite arrays. Nature Communications 14, 3502 (2023)
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Kusch, S.; Qian, J.; Loos, A.; Kümmel, F.; Spanu, P. D.; Panstruga, R.: Long-term and rapid evolution in powdery mildew fungi. Molecular Ecology (2023)
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Lian, Q.; Maestroni, L.; Gaudin, M.; Llorente, B.; Mercier, R.: Meiotic recombination is confirmed to be unusually high in the fission yeast Schizosaccharomyces pombe. iScience 26 (9), 107614 (2023)
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Llamas, E.; Koyuncu, S.; Lee, H. J.; Wehrmann, M.; Gutierrez-Garcia, R.; Dunken, N.; Charura, N.; Torres-Montilla, S.; Schlimgen, E.; Mandel, A. M. et al.; Theile, E. B.; Grossbach, J.; Wagle, P.; Lackmann, J.-W.; Schermer, B.; Benzing, T.; Beyer, A.; Pulido, P.; Rodriguez-Concepcion, M.; Zuccaro, A.; Vilchez, D.: In planta expression of human polyQ-expanded huntingtin fragment reveals mechanisms to prevent disease-related protein aggregation. Nature aging 3, pp. 1345 - 1357 (2023)
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Locci, F.; Wang, J.; Parker, J. E.: TIR-domain enzymatic activities at the heart of plant immunity. Current Opinion in Plant Biology 74, 102373 (2023)
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Mahlandt, A.; Singh, D. K.; Mercier, R.: Engineering apomixis in crops. Theoretical and Applied Genetics 136 (6), 131 (2023)
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Marques, D. N.; Mason, C.; Stolze, S. C.; Harzen, A.; Nakagami, H.; Skirycz, A.; Piotto, F. A.; Antunes Azevedo, R.: Grafting systems for plant cadmium research: Insights for basic plant physiology and applied mitigation. Science of the Total Environment 892, 164610 (2023)
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Martignago, D.; da Silveira Falavigna, V.; Lombardi, A.; Gao, H.; Kurkowski, P. K.; Galbiati, M.; Tonelli, C.; Coupland, G.; Conti, L.: The bZIP transcription factor AREB3 mediates FT signalling and floral transition at the Arabidopsis shoot apical meristem. PLoS Genetics 19 (5), e1010766 (2023)
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Mata-Sucre, Y.; Matzenauer, W.; Castro, N.; Huettel, B.; Pedrosa-Harand, A.; Marques, A.; Souza, G.: Repeat-based phylogenomics shed light on unclear relationships in the monocentric genus Juncus L. (Juncaceae). Molecular Phylogenetics and Evolution 189, 107930 (2023)
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Mesny, F.; Hacquard, S.; Thomma, B. P. H. J.: Co-evolution within the plant holobiont drives host performance. EMBO Reports 24 (9), e57455 (2023)
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Michailidis, M.; Bazakos, C.; Kollaros, M.; Adamakis, I.-D. S.; Ganopoulos, I.; Molassiotis, A.; Tanou, G.: Boron stimulates fruit formation and reprograms developmental metabolism in sweet cherry. Physiologia Plantarum 175 (3), e13946 (2023)
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Mueller, Y.; Patwari, P.; Stoecker, T.; Zeisler-Diehl, V.; Steiner, U.; Campoli, C.; Grewe, L.; Kuczkowska, M.; Dierig, M. M.; Jose, S. et al.; Hetherington, A. M.; Acosta, I. F.; Schoof, H.; Schreiber, L.; Doermann, P.: Isolation and characterization of the gene HvFAR1 encoding acyl-CoA reductase from the cer-za.227 mutant of barley (Hordeum vulgare) and analysis of the cuticular barrier functions. New Phytologist 239 (5), pp. 1903 - 1918 (2023)
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Myers, Z. A.; Wootan, C. M.; Liang, Z.; Zhou, P.; Engelhorn, J.; Hartwig, T.; Nathan, S. M.: Conserved and variable heat stress responses of the Heat Shock Factor transcription factor family in maize and Setaria viridis. Plant Direct 7 (4), e489 (2023)
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Neto, C.; Hancock, A.: Genetic Architecture of Flowering Time Differs Between Populations With Contrasting Demographic and Selective Histories. Molecular Biology and Evolution 40 (8), msad185 (2023)
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Nishikawa, M.; Katsu, K.; Koinuma, H.; Hashimoto, M.; Neriya, Y.; Matsuyama, J.; Yamamoto, T.; Suzuki, M.; Matsumoto, O.; Matsui, H. et al.; Nakagami, H.; Maejima, K.; Namba, S.; Yamaji, Y.: Interaction of EXA1 and eIF4E Family Members Facilitates Potexvirus Infection in Arabidopsis thaliana. Journal of Virology (2023)
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Ordon, J.; Kiel, N.; Becker, D.; Kretschmer, C.; Schulze-Lefert, P.; Stuttmann, J.: Targeted gene deletion with SpCas9 and multiple guide RNAs in Arabidopsis thaliana: four are better than two. Plant Methods 19 (1), 30 (2023)
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Peckham, M.; Neumann, U.; Culley, S.: Introduction to women in microscopy: Volume 1. Special Issue 291 (1), pp. 3 - 4 (2023)
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Peng, H.; Feng, H.; Zhang, T.; Wang, Q.: Plant defense mechanisms in plant-pathogen interactions. Frontiers in Plant Science 14, 1292294 (2023)
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Prautsch, J.; Erickson, J. L.; Oezyuerek, S.; Gormanns, R.; Franke, L.; Lu, Y.; Marx, J.; Niemeyer, F.; Parker, J. E.; Stuttmann, J. et al.; Schattat, M. H.: Effector XopQ-induced stromule formation in Nicotiana benthamiana depends on ETI signaling components ADR1 and NRG1. Plant Physiology 191, pp. 161 - 176 (2023)
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Rahimzadeh Karvansara, P.; Kelly, C.; Krone, R.; Zenzen, I.; Ristova, D.; Silz, E.; Jobe, T.O.; Kopriva, S.: Unique features of regulation of sulfate assimilation in monocots. Journal of Experimental Botany 74 (1308), 320, pp. 308 (2023)
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Saul, F.; Scharmann, M.; Wakatake, T.; Rajaraman, S.; Marques, A.; Freund, M.; Bringmann, G.; Channon, L.; Becker, D.; Carroll, E. et al.; Low, Y. W.; Lindqvist, C.; Gilbert, K. J.; Renner, T.; Masuda, S.; Richter, M.; Vogg, G.; Shirasu, K.; Michael, T. P.; Hedrich, R.; Albert, V. A.; Fukushima, K.: Subgenome dominance shapes novel gene evolution in the decaploid pitcher plant Nepenthes gracilis. Nature Plants 9 (12), pp. 2000 - 2015 (2023)
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Shi, W.; Stolze, S. C.; Nakagami, H.; Misas Villamil, J. C.; Saur, I. M. L.; Doehlemann, G.: Combination of in vivo proximity labeling and co-immunoprecipitation identifies the host target network of a tumor-inducing effector in the fungal maize pathogen Ustilago maydis. Journal of Experimental Botany 74 (15), pp. 4736 - 4750 (2023)
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Singh, D. K.; Gamboa, R. S.; Singh, A. K.; Walkemeier, B.; Van Leene, J.; De Jaeger, G.; Siddiqi, I.; Guerois, R.; Crismani, W.; Mercier, R.: The FANCC-FANCE-FANCF complex is evolutionarily conserved and regulates meiotic recombination. Nucleic Acids Research 51 (3), pp. 2516 - 2528 (2023)
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Singh, D. K.; Lian, Q.; Durand, S.; Fernandes, J. B.; Chambon, A.; Hurel, A.; Walkemeier, B.; Solier, V.; Kumar, R.; Mercier, R.: HEIP1 is required for efficient meiotic crossover implementation and is conserved from plants to humans. Proceedings of the National Academy of Sciences of the United States of America 120 (23), e2221746120 (2023)
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Srivastava, R.; Bazakos, C.; Tsachaki, M.; Zanko, D.; Kalantidis, K.; Tsiantis, M.; Laurent, S.: Genealogical Analyses of 3 Cultivated and 1 Wild Specimen of Vitis vinifera from Greece. Genome Biology and Evolution 15 (12), evad226 (2023)
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Thangavel, G.; Hofstatter, P. G.; Mercier, R.; Marques, A.: Tracing the evolution of the plant meiotic molecular machinery. Plant Reproduction (2023)
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Tourvas, N.; Ganopoulos, I.; Koubouris, G.; Kostelenos, G.; Manthos, I.; Bazakos, C.; Stournaras, V.; Molassiotis, A.; Aravanopoulos, F.: Wild and cultivated olive tree genetic diversity in Greece: a diverse resource in danger of erosion. Frontiers in Genetics 14, 1298565 (2023)
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Vannier, N.; Mesny, F.; Getzke, F.; Chesneau, G.; Dethier, L.; Ordon, J.; Thiergart, T.; Hacquard, S.: Genome-resolved metatranscriptomics 1 reveals conserved root colonization determinants in a synthetic microbiota. Nature Communications 14, 8274 (2023)
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Vrielynck, N.; Peuch, M.; Durand, S.; Lian, Q.; Chambon, A.; Hurel, A.; Guerin, J.; Guerois, R.; Mercier, R.; Grelon, M. et al.; Mezard, C.: SCEP1 and SCEP2 are two new components of the synaptonemal complex central element. Nature Plants 9, pp. 2016 - 2030 (2023)
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Wang, J.; Song, W.; Chai, J.: Structure, biochemical function, and signaling mechanism of plant NLRs. Molecular Plant 16 (1), pp. 75 - 95 (2023)
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Wang, T.; Wang, H.; Lian, Q.; Jia, Q.; You, C.; Copenhaver, G. P.; Wang, C.; Wang, Y.: HEI10 is subject to phase separation and mediates RPA1a degradation during meiotic interference- sensitive crossover formation. PNAS 120 (52), e2310542120 (2023)
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Wang, Y.; Underwood, C. J.: The Apomixis. Current Biology 33 (8) (2023)
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Wanke, A.; van Boerdonk, S.; Mahdi, L. K.; Wawra, S.; Neidert, M.; Chandrasekar, B.; Saake, P.; Saur, I. M. L.; Derbyshire, P.; Holton, N. et al.; Menke, F. L. H.; Brands, M.; Pauly, M.; Acosta, I.; Zipfel, C.; Zuccaro, A.: A GH81-type β-glucan-binding protein enhances colonization by mutualistic fungi in barley. Current Biology 33 (23), pp. 5071 - 5084.e7 (2023)
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Weisweiler, M.; Stich, B.: Benchmarking of structural variant detection in the tetraploid potato genome using linked-read sequencing. Genomics 115 (2), 110568 (2023)
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Wu, P.Y.; Stich, B.; Renner, J.; Muders, K.; Prigge, V.; van Inghelandt, D.: Optimal implementation of genomic selection in clone breeding programs-Exemplified in potato: I. Effect of selection strategy, implementation stage, and selection intensity on short-term genetic gain. The Plant Genome 16 (2), e20327 (2023)
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Wu, Y.; Sun, Y.; Richet, E.; Han, Z.; Chai, J.: Structural basis for negative regulation of the Escherichia coli maltose system. Nature Communications 14 (1), 4925 (2023)
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Wunder, J.; Fulgione, A.; Toraeng, P.; Woetzel, S.; Herzog, M.; Obeso, J. R.; Kourmpetis, Y.; van Ham, R.; Odong, T.; Bink, M. et al.; Kemi, U.; Agren, J.; Coupland, G.: Adaptation of perennial flowering phenology across the European range of Arabis alpina. Proceedings of the Royal Society of London Series B 290 (2011), 20231401 (2023)
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Xu, M.-R.-X.; Liao, Z.-Y.; Brock, J. R.; Du, K.; Li, G.-Y.; Chen, Z.-Q.; Wang, Y.-H.; Gao, Z.-N.; Agarwal, G.; Wei, K. H.-C. et al.; Shao, F.; Pang, S.; Platts, A. E.; Van den Velde, J. D.; Lin, H.-M.; Teresi, S. J.; Bird, K.; Niederhuth, C. E.; Xu, J.-G.; Yu, G.-H.; Yang, J.-Y.; Dai, S.-F.; Nelson, A.; Braasch, I.; Zhang, X.-G.; Schartl, M.; Edger, P. P.; Han, M.-J.; Zhang, H.-H.: Maternal dominance contributes to subgenome differentiation in allopolyploid fishes. Nature Communications 14 (1), 8357 (2023)
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Yotsui, I.; Matsui, H.; Miyauchi, S.; Iwakawa, H.; Melkonian, K.; Schlueter, T.; Michavila, S.; Kanazawa, T.; Nomura, Y.; Stolze, S. C. et al.; Jeon, H.-W.; Yan, Y.; Harzen, A.; Sugano, S. S.; Shirakawa, M.; Nishihama, R.; Ichihashi, Y.; Gimenez Ibanez, S.; Shirasu, K.; Ueda, T.; Kohchi, T.; Nakagami, H.: LysM-mediated signaling in Marchantia polymorpha highlights the conservation of pattern-triggered immunity in land plants. Current Biology (2023)
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Zeng, Y.; Zheng, Z.; Hessler, G.; Zou, K.; Bautor, J.; Stuttmann, J.; Xue, L.; Parker, J. E.; Cui, H.: Arabidopsis PAD4 promotes the maturation and nuclear accumulation of immune-related cysteine protease RD19. Journal of Experimental Botany, erad454 (2023)
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