Journal Article (2112)

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Gol, L.; Haraldsson, E. B.; von Korff, M.: Ppd-H1 integrates drought stress signals to control spike development and flowering time in barley. Special Issue 72 (1), pp. 122 - 136 (2021)
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Graf, J. S.; Schorn, S.; Kitzinger, K.; Ahmerkamp, S.; Woehle, C.; Huettel, B.; Schubert, C. J.; Kuypers, M. M. M.; Milucka, J.: Anaerobic endosymbiont generates energy for ciliate host by denitrification. NATURE 591 (7850), pp. 445 - 450 (2021)
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Heidler von Heilborn, D.; Reinmueller, J.; Hoelzl, G.; Meier-Kolthoff, J. P.; Woehle, C.; Marek, M.; Huettel, B.; Lipski, A.: Sphingomonas aliaeris sp. nov., a new species isolated from pork steak packed under modified atmosphere. International Journal of Systematic and Evolutionary Microbiology 71 (8), 004973 (2021)
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Hofstatter, P. G.; Thangavel, G.; Castellani, M.; Marques, A.: Meiosis Progression and Recombination in Holocentric Plants: What Is Known? Frontiers in Plant Science 12, 617 (2021)
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Holbein, J.; Shen, D.; Andersen, T. G.: The endodermal passage cell - just another brick in the wall? New Phytologist 230 (4), pp. 1321 - 1328 (2021)
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Hou, S.; Liu, D.; Huang, S.; Luo, D.; Liu, Z.; Xiang, Q.; Wang, P.; Mu, R.; Han, Z.; Chen, S. et al.; Chai, J.; Shan, L.; He, P.: The Arabidopsis MIK2 receptor elicits immunity by sensing a conserved signature from phytocytokines and microbes. Nature Communications 12 (1), 5494 (2021)
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Hou, S.; Thiergart, T.; Vannier, N.; Mesny, F.; Ziegler, J.; Pickel, B.; Hacquard, S.: A microbiota-root-shoot circuit favours Arabidopsis growth over defence under suboptimal light. Nature Plants (2021)
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Hou, S.; Wolinska, K. W.; Hacquard, S.: Microbiota-root-shoot-environment axis and stress tolerance in plants. Current Opinion in Plant Biology 62, 102028 (2021)
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Iwakawa, H.; Melkonian, K.; Schluter, T.; Jeon, H.-W.; Nishihama, R.; Motose, H.; Nakagami, H.: Agrobacterium-Mediated Transient Transformation of Marchantia Liverworts. Plant and Cell Physiology 62 (11), pp. 1718 - 1727 (2021)
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Jia, Z.; Ding, M.; Nakano, M.; Hong, K.; Huang, R.; Becker, D.; Glazebrook, J.; Katagiri, F.; Han, X.; Tsuda, K.: DNA Purification-Free PCR from Plant Tissues. Plant and Cell Physiology 62 (10), pp. 1503 - 1505 (2021)
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Jiao, W.-B.; Patel, V.; Klasen, J. R.; Liu, F.; Pecinkova, P.; Ferrand, M.; Gy, I.; Camilleri, C.; Effgen, S.; Koornneef, M. et al.; Pecinka, A.; Loudet, O.; Schneeberger, K.: The Evolutionary Dynamics of Genetic Incompatibilities Introduced by Duplicated Genes in Arabidopsis thaliana. Molecular Biology and Evolution 38 (4), pp. 1225 - 1240 (2021)
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Joshi, M.; Kapopoulou, A.; Laurent, S.: Impact of Genetic Variation in Gene Regulatory Sequences: A Population Genomics Perspective. Frontiers in Genetics 12, 660899 (2021)
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Kawaharada, Y.; Sandal, N.; Gupta, V.; Jin, H.; Kawaharada, M.; Taniuchi, M.; Ruman, H.; Nadzieja, M.; Andersen, K.r. R.; Schneeberger, K. et al.; Stougaard, J.; Andersen, S. U.: Natural variation identifies a Pxy gene controlling vascular organisation and formation of nodules and lateral roots in Lotus japonicus. New Phytologist (2021)
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Khouider, S.; Borges, F.; LeBlanc, C.; Ungru, A.; Schnittger, A.; Martienssen, R.; Colot, V.; Bouyer, D.: Male fertility in Arabidopsis requires active DNA demethylation of genes that control pollen tube function. Nature Communications 12 (1), 410 (2021)
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Kimura, T.; Haga, K.; Nomura, Y.; Higaki, T.; Nakagami, H.; Sakai, T.: Phosphorylation of NONPHOTOTROPIC HYPOCOTYL3 affects photosensory adaptation during the phototropic response. Plant Physiology 187 (2), pp. 981 - 995 (2021)
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Koornneef, M.: A Central Role for Genetics in Plant Biology. Annual Review of Plant Biology 72, pp. 1 - 16 (2021)
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Kremer, J. M.; Sohrabi, R.; Paasch, B. C.; Rhodes, D.; Thireault, C.; Schulze-Lefert, P.; Tiedje, J. M.; He, S. Y.: Peat-based gnotobiotic plant growth systems for Arabidopsis microbiome research. Nature Protocols 16, pp. 2450 - 2470 (2021)
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Lee, C. H.; Hawker, N. P.; Peters, J. R.; Lonhienne, T. G. A.; Gursanscky, N. R.; Matthew, L.; Brosnan, C. A.; Mann, C. W. G.; Cromer, L.; Taochy, C. et al.; Ngo, Q. A.; Sundaresan, V.; Schenk, P. M.; Kobe, B.; Borges, F.; Mercier, R.; Bowman, J. L.; Carroll, B. J.: DEFECTIVE EMBRYO AND MERISTEMS genes are required for cell division and gamete viability in Arabidopsis. PLoS Genetics 17 (5), e1009561 (2021)
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Loo, E.; Tajima, Y.; Yamada, K.; Kido, S.; Hirase, T.; Ariga, H.; Fujiwara, T.; Tanaka, K.; Taji, T.; Somssich, I. et al.; Parker, J. E.; Saijo, Y.: Recognition of microbe/damage-associated molecular patterns by leucine-rich repeat pattern recognition receptor kinases confers salt tolerance in plants. Molecular Plant-Microbe Interactions (2021)
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Lopéz, H.; Schmitz, G.; Thoma, R.; Theres, K.: Super determinant1A, a RAWULdomain-containing protein, modulates axillary meristem formation and compound leaf development in tomato. The Plant Cell 33 (7), pp. 2412 - 2430 (2021)
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Ma, K.-W.; Niu, Y.; Jia, Y.; Ordon, J.; Copeland, C.; Emonet, A.; Geldner, N.; Guan, R.; Stolze, S. C.; Nakagami, H. et al.; Garrido-Oter, R.; Schulze-Lefert, P.: Coordination of microbe–host homeostasis by crosstalk with plant innate immunity. Nature Plants (2021)
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Madrid-Herrero, E.; Severing, E.; De Ansorena, E.; Kiefer, C.; Brand, L.; Martinez-Gallegos, R.; Woetzel, S.; Kemi, U.; Jiao, W.-B.; Schneeberger, K. et al.; Coupland, G.: Transposition and duplication of MADS-domain transcription factor genes in annual and perennial Arabis species modulates flowering. Proceedings of the National Academy of Sciences of the United States of America 118 (39), e2109204118 (2021)
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Mahdi, L.; Miyauchi, S.; Uhlmann, C.; Garrido-Oter, R.; Langen, G.; Wawra, S.; Niu, Y.; Guan, R.; Guan, R.; Robertson-Albertyn, S. et al.; Bulgarelli, D.; Parker, J. E.; Zuccaro, A.: The fungal root endophyte Serendipita vermifera displays inter-kingdom synergistic beneficial effects with the microbiota in Arabidopsis thaliana and barley. The ISME Journal (2021)
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Mapar, M.; Chopra, D.; Stephan, L.; Schrader, A.; Sun, H.; Schneeberger, K.; Albani, M.; Coupland, G.; Huelskamp, M.: Genetic and Molecular Analysis of Root Hair Development in Arabis alpina. Frontiers in Plant Science 12, 767772 (2021)
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Marques, D. N.; Stolze, S. C.; Harzen, A.; Nogueira, M. L.; Batagin-Piotto, K. D.; Piotto, F. A.; Mason, C.; Azevedo, R. A.; Nakagami, H.: Comparative phosphoproteomic analysis of tomato genotypes with contrasting cadmium tolerance. Plant Cell Reports 40 (10), pp. 2001 - 2008 (2021)
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Mataigne, V.; Vannier, N.; Vandenkoornhuyse, P.; Hacquard, S.: Microbial Systems Ecology to Understand Cross-Feeding in Microbiomes. Frontiers in Microbiology 12 (2021)
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Mayer, T.; Mari, A.; Almario, J.; Murillo-Roos, M.; Abdullah, H. S. M.; Dombrowski, N.; Hacquard, S.; Kemen, E. M.; Agler, M. T.: Obtaining deeper insights into microbiome diversity using a simple method to block host and nontargets in amplicon sequencing. Molecular Ecology Resources 21 (6), pp. 1952 - 1965 (2021)
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Mesny, F.; Miyauchi, S.; Thiergart, T.; Pickel, B.; Atanasova, L.; Karlsson, M.; Huettel, B.; Barry, K.W.; Haridas, S.; Chen, C. et al.; Bauer, D.; Andreopoulos, W.; Pangilinan, J.; LaButti, K.; Riley, R.; Lipzen, A.; Clum, A.; Drula, E.; Henrissat, B.; Kohler, A.; Grigoriev, I.V.; Martin, F.M.; Hacquard, S.: Genetic determinants of endophytism in the Arabidopsis root mycobiome. Nature Communications 12, 7227 (2021)
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Monroe, J. G.; McKay, J. K.; Weigel, D.; Flood, P. J.: The population genomics of adaptive loss of function. Heredity 126, pp. 383 - 395 (2021)
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Naish, M.; Alonge, M.; Wlodzimierz, P.; Tock, A. J.; Abramson, B. W.; Schmuecker, A.; Mandakova, T.; Jamge, B.; Lambing, C.; Kuo, P. et al.; Yelina, N.; Hartwick, N.; Colt, K.; Smith, L.M.; Ton, J.; Kakutani, T.; Martienssen, R. A.; Schneeberger, K.; Lysak, M. A.; Berger, F.; Bousios, A.; Michael, T. P.; Schatz, M. C.; Henderson, I. R.: The genetic and epigenetic landscape of the Arabidopsis centromeres. SCIENCE 374 (6569), eabi7489, pp. 840 - + (2021)
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Nakano, R. T.: A Friend in Common: A Small GTPase in Independent PTI and ETI Immune Receptor Complexes. Plant and Cell Physiology 62 (11), pp. 1645 - 1647 (2021)
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O'Maoiléidigh, D. S.; van Driel, A. D.; Singh, A.; Sang, Q.; Le Bec, N.; Vincent, C.; Bertran Garcia de Olalla, B.; Vayssières, A.; Romera Branchat, M.; Severing, E. et al.; Martinez-Gallegos, R.; Coupland, G.: Systematic analyses of the MIR172 family members of Arabidopsis define their distinct roles in regulation of APETALA2 during floral transition. PLoS Biology 19 (2), e3001043 (2021)
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Ökmen, B.; Schwammbach, D.; Bakkeren, G.; Neumann, U.; Doehlemann, G.: The Ustilago hordei-barley interaction is a versatile system for characterization of fungal effectors. Journal of Fungi 7 (86) (2021)
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Parker, J.; Hessler, G.; Cui, H.: A new biochemistry connecting pathogen detection to induced defense in plants. New Phytologist (2021)
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Paulisic, S.; Qin, W.; Veraszto, H. A.; Then, C.; Alary, B.; Nogue, F.; Tsiantis, M.; Hothorn, M.; Martinez-Garcia, J. F.: Adjustment of the PIF7-HFR1 transcriptional module activity controls plant shade adaptation. EMBO Journal 40, e104273 (2021)
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Perea-Garcia, A.; Andres-Borderia, A.; Huijser, P.; Penarrubia, L.: The Copper-microRNA Pathway Is Integrated with Developmental and Environmental Stress Responses in Arabidopsis thaliana. International Journal of Molecular Sciences 22 (17), 9547 (2021)
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Petrella, R.; Cucinotta, M.; Mendes, M. A.; Underwood, C. J.; Colombo , L.: The emerging role of small RNAs in ovule development, a kind of magic. Plant Reproduction (2021)
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Pieper, R.; Tomé, F.; Pankin, A.; von Korff, M.: FLOWERING LOCUS T4 delays flowering and decreases floret fertility in barley. Special Issue 72 (1), pp. 107 - 121 (2021)
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Plesken, C.; Pattar, P.; Reiss, B.; Noor, Z. N.; Zhang, L.; Klug, K.; Huettel, B.; Hahn, M.: Genetic Diversity of Botrytis cinerea Revealed by Multilocus Sequencing, and Identification of B. cinerea Populations Showing Genetic Isolation and Distinct Host Adaptation. Frontiers in Plant Science 12, 663027 (2021)
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Provart, N. J.; Brady, S. M.; Parry, G.; Schmitz, R. J.; Queitsch, C.; Bonetta, D.; Waese, J.; Schneeberger, K.; Loraine, A.E.: Anno genominis XX: 20 years of Arabidopsis genomics. The Plant Cell 33 (4), pp. 832 - 845 (2021)
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Pruitt, R. N.; Locci, F.; Wanke, F.; Zhang, L.; Saile, S. C.; Joe, A.; Karelina, D.; Hua, C.; Fröhlich, K.; Wan, W.-L. et al.; Hu, M.; Rao, S.; Stolze, S. C.; Harzen, A.; Gust, A. A.; Harter, K.; Joosten, M. H. A. J.; Thomma, B. P. H. J.; Zhou, J.-M.; Dangl, J. L.; Weigel, D.; Nakagami, H.; Oecking, C.; Kasmi, F. E.; Parker, J. E.; Nürnberger, T.: The EDS1–PAD4–ADR1 node mediates Arabidopsis pattern-triggered immunity. Nature (2021)
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Quero-Garcia, J.; Letourmy, P.; Campoy, J. A.; Branchereau, C.; Malchev, S.; Barreneche, T.; Dirlewanger, E.: Multi-year analyses on three populations reveal the first stable QTLs for tolerance to rain-induced fruit cracking in sweet cherry (Prunus avium L.). Horticulture Research 8 (1), 136 (2021)
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Ruytinx, J.; Miyauchi, S.; Hartmann-Wittulsky, S.; de Freitas Pereira, M.; Guinet, F.; Churin, J.-L.; Put, C.; Le Tacon, F.; Veneault-Fourrey, C.; Martin, F. et al.; Kohler, A.: A Transcriptomic Atlas of the Ectomycorrhizal Fungus Laccaria bicolor. Microorganisms 9 (12), 2612 (2021)
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Sanagi, M.; Aoyama, S.; Kubo, A.; Lu, Y.; Sato, Y.; Ito, S.; Abe, M.; Mitsuda, N.; Ohme-Takagi, M.; Kiba, T. et al.; Nakagami, H.; Rolland, F.; Yamaguchi, J.; Imaizumi, T.; Sato, T.: Low nitrogen conditions accelerate flowering by modulating the phosphorylation state of FLOWERING BHLH 4 in Arabidopsis. Proceedings of the National Academy of Sciences of the United States of America 118 (19), e2022942118 (2021)
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Saur, I. M. L.; Hueckelhoven, R.: Recognition and defence of plant-infecting fungal pathogens. Journal of Plant Physiology 256, 153324 (2021)
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Saur, I. M. L.; Panstruga, R.; Schulze-Lefert, P.: NOD-like receptor-mediated plant immunity: from structure to cell death. Nature Reviews Immunology 21, pp. 305 - 318 (2021)
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Savadel, S. D.; Hartwig, T.; Turpin, Z. M.; Vera, D. L.; Lung, P. Y.; Sui, X.; Blank, M.; Frommer, W. B.; Dennis, J. H.; Zhang, J. et al.; Bass, H. W.: The native cistrome and sequence motif families of the maize ear. PLoS Genetics 17 (8), e1009689 (2021)
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Schneider, C.; Woehle, C.; Greve, C.; D'Haese, C. A.; Wolf, M.; Hiller, M.; Janke, A.; Balint, M.; Huettel, B.: Two high-quality de novo genomes from single ethanol-preserved specimens of tiny metazoans (Collembola). GigaScience 10 (5), giab035, pp. 1 - 12 (2021)
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Schrinner, S.; Goel, M.; Wulfert, M.; Spohr, P.; Schneeberger, K.; Klau, G. W.: Using the longest run subsequence problem within homology-based scaffolding. Algorithms for Molecular Biology 16 (1), 11 (2021)
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Schuetz, V.; Frindte, K.; Cui, J.; Zhang, P.; Hacquard, S.; Schulze-Lefert, P.; Knief, C.; Schulz, M.; Doermann, P.: Differential Impact of Plant Secondary Metabolites on the Soil Microbiota. Frontiers in Microbiology 12, 666010 (2021)
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