Scientific Publications since 2002

Max Planck Institute for Plant Breeding Research

Journal Article (2416)

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Sarnowska, E.; Gratkowska, D. M.; Sacharowski, S. P.; Cwiek, P.; Tohge, T.; Fernie, A. R.; Siedlecki, J. A.; Koncz, C.; Sarnowski, T. J.: The Role of SWI/SNF Chromatin Remodeling Complexes in Hormone Crosstalk. Trends in Plant Science 21, pp. 594 - 608 (2016)

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Scheuring, D.; Loefke, C.; Krueger, F.; Kittelmann, M.; Eisa, A.; Hughes, L.; Smith, R. S.; Hawes, C.; Schumacher, K.; Kleine-Vehn, J.: Actin-dependent vacuolar occupancy of the cell determines auxin-induced growth repression. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 113 (2), pp. 452 - 457 (2016)

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Schneeberger, K.: Plant genic methylation: Conserved for 400 million years. Nature Plants 2 (2), 16003 (2016)

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Schnoedt, M.; Schmeer, M.; Kracher, B.; Kruesemann, C.; Espinosa, L. E.; Gruenert, A.; Fuchsluger, T.; Rischmueller, A.; Schleef, M.; Buening, H.: DNA minicircle technology improves purity of Adeno-associated viral vector preparations. Molecular Therapy - Nucleic Acids 5, e355 (2016)

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Schoenhals, E. M.; Ortega, F.; Barandalla, L.; Aragones, A.; de Galarreta, J. I. R.; Liao, J. -.; Sanetomo, R.; Walkemeier, B.; Tacke, E.; Ritter, E. et al.; Gebhardt, C.: Identification and reproducibility of diagnostic DNA markers for tuber starch and yield optimization in a novel association mapping population of potato (Solanum tuberosum L.). Theoretical and Applied Genetics 129 (4), pp. 767 - 785 (2016)

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Schulz, M.; Filary, B.; Kuehn, S.; Colby, T.; Harzen, A.; Schmidt, J.; Sicker, D.; Hennig, L.; Hofmann, D.; Disko, U. et al.; Anders, N.: Benzoxazolinone detoxification by N-Glucosylation: The multi-compartment-network of Zea mays L. Plant Signaling & Behavior 11 (1), e1119962 (2016)

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Serfling, A.; Templer, S. E.; Winter, P.; Ordon, F.: Microscopic and Molecular Characterization of the Prehaustorial Resistance against Wheat Leaf Rust (Puccinia triticina) in Einkorn (Triticum monococcum). Frontiers in Plant Science 7, 1668 (2016)

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Shi, B.; Zhang, C.; Tian, C.; Wang, J.; Wang, Q.; Xu, T.; Xu, Y.; Ohno, C.; Sablowski, R.; Heisler, M. G. et al.; Theres, K.; Wang, Y.; Jiao, Y.: Two-Step Regulation of a Meristematic Cell Population Acting in Shoot Branching in Arabidopsis. PLoS Genetics 12 (7), e1006168 (2016)

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Shindo, T.; Kaschani, F.; Yang, F.; Kovacs, J.; Tian, F.; Kourelis, J.; Hong, T. N.; Colby, T.; Shabab, M.; Chawla, R. et al.; Kumari, S.; Ilyas, M.; Hoerger, A. C.; Alfano, J. R.; Van der Hoorn, R. A. L.: Screen of Non-annotated Small Secreted Proteins of Pseudomonas syringae Reveals a Virulence Factor That Inhibits Tomato Immune Proteases. PLoS Pathogens 12 (9), e1005874 (2016)

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Sindlinger, J.; Bierlmeier, J.; Geiger, L.-C.; Kramer, K.; Finkemeier, I.; Schwarzer, D.: Probing the structure-activity relationship of endogenous histone deacetylase complexes with immobilized peptide-inhibitors. Journal of Peptide Science 22 (5), pp. 352 - 359 (2016)

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Smirnov, A.; Foerstner, K. U.; Holmqvist, E.; Otto, A.; Guenster, R.; Becher, D.; Reinhardt, R.; Vogel, J.: Grad-seq guides the discovery of ProQ as a major small RNA-binding protein. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 113 (41), pp. 11591 - 11596 (2016)

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Srinivasan, A.; Jimenez-Gomez, J. M.; Fornara, F.; Soppe, W.; Brambilla, V.: Alternative splicing enhances transcriptome complexity in desiccating seeds. Journal of Integrative Plant Biology 58 (12), pp. 947 - 958 (2016)

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Stiti, N.; Chandrasekar, B.; Strubl, L.; Mohammed, S.; Bartels, D.; Van der Hoorn, R. A. L.: Nicotinamide Cofactors Suppress Active-Site Labeling of Aldehyde Dehydrogenases. ACS Chemical Biology 11 (6), pp. 1578 - 1586 (2016)

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Stuttmann, J.; Peine, N.; Garcia, A. V.; Wagner, C.; Choudhury, S. R.; Wang, Y.; James, G. V.; Griebel, T.; Alcázar, R.; Tsuda, K. et al.; Schneeberger, K.; Parker, J. E.: Arabidopsis thaliana DM2h (R8) within the Landsberg RPP1-like Resistance Locus Underlies Three Different Cases of EDS1-Conditioned Autoimmunity. PLoS Genetics 12 (4), e1005990 (2016)

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Takahara, H.; Hacquard, S.; Kombrink, A.; Bleddy Hughes, H.; Halder, V.; Robin, G. P.; Hiruma, K.; Neumann, U.; Shinya, T.; Kombrink, E. et al.; Shibuya, N.; Thomma, B. P. H. J.; O'Connell, R. J. O.: Colletotrichum higginsianum extracellular LysM proteins play dual roles in appressorial function and suppression of chitin-triggered plant immunity. New Phytologist 211, pp. 1323 - 1337 (2016)

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Tine, M.; Kuhl, H.; Teske, P. R.; Tschoep, M. H.; Jastroch, M.: Diversification and coevolution of the ghrelin/growth hormone secretagogue receptor system in vertebrates. Ecology and Evolution 6 (8), pp. 2516 - 2535 (2016)

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Tsugawa, S.; Hervieux, N.; Hamant, O.; Boudaoud, A.; Smith, R. S.; Li, C.-B.; Komatsuzaki, T.: Extracting Subcellular Fibrillar Alignment with Error Estimation: Application to Microtubules. BIOPHYSICAL JOURNAL 110 (8), pp. 1836 - 1844 (2016)

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Vijayakumar, V.; Liebisch, G.; Buer, B.; Xue, L.; Gerlach, N.; Blau, S.; Schmitz, J.; Bucher, M.: Integrated multi-omics analysis supports role of lysophosphatidylcholine and related glycerophospholipids in the Lotus japonicus–Glomus intraradices mycorrhizal symbiosis. Plant, Cell and Environment 39, pp. 393 - 415 (2016)

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von Wangenheim, D.; Fangerau, J.; Schmitz, A.; Smith, R. S.; Leitte, H.; Stelzer, E. H. K.; Maizel, A.: Rules and Self-Organizing Properties of Post-embryonic Plant Organ Cell Division Patterns. Current Biology 26 (4), pp. 439 - 449 (2016)

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Vuolo, F.; Mentink, R. A.; Hajheidari, M.; Bailey, C. D.; Filatov, D. A.; Tsiantis, M.: Coupled enhancer and coding sequence evolution of a homeobox gene shaped leaf diversity. Genes and Development 30, pp. 2370 - 2375 (2016)

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Wang, Q.; Hasson, A.; Rossmann, S.; Theres, K.: Divide et impera: boundaries shape the plant body and initiate new meristems. New Phytologist 209 (2), pp. 485 - 498 (2016)

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Wang, Y.; Wu, J.; Kim, S. G.; Tsuda, K.; Gupta, R.; Park, S.-Y.; Kim, S. T.; Kang, K. Y.: Magnaporthe oryzae-Secreted Protein MSP1 Induces Cell Death and Elicits Defense Responses in Rice. Molecular Plant-Microbe Interactions 29 (4), pp. 299 - 312 (2016)

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Wang, Z.; Chen, F.; Li, X.; Cao, H.; Ding, M.; Zhang, C.; Zuo, J.; Xu, C.; Xu, J.; Deng, X. et al.; Xiang, Y.; Soppe, W. J. J.; Liu, Y.: Arabidopsis seed germination speed is controlled by SNL histone deacetylase-binding factor-mediated regulation of AUX1. Nature Communications 7, 13412 (2016)

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Wasmund, K.; Cooper, M.; Schreiber, L.; Lloyd, K.G.; Baker, B.J.; Petersen, D.G.; Jørgensen, B.B.; Stepanauskas, R.; Reinhardt, R.; Schramm, A. et al.; Loy, A.; Adrian, L.: Single-Cell Genome and Group-Specific dsrAB Sequencing Implicate Marine Members of the Class Dehalococcoidia (Phylum Chloroflexi) in Sulfur Cycling. mBio, e00266-16 (2016)

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Watanabe, K.; Breier, U.; Hensel, G.; Kumlehn, J.; Schubert, I.; Reiss, B.: Stable gene replacement in barley by targeted double-strand break induction. Journal of Experimental Botany 67 (5), pp. 1433 - 1445 (2016)

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Weber, B.; Zicola, J.; Oka, R.; Stam, M.: Plant Enhancers: A Call for Discovery. Trends in Plant Science 21, pp. 974 - 987 (2016)

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Wehrens, R.; Hageman, J. A.; van Eeuwijk, F.; Kooke, R.; Flood, P.; Wijnker, E.; Keurentjes, J. J. B.; Lommen, A.; van Eekelen, H. D. L. M.; Hall, R. D. et al.; Mumm, R.; de Vos, R. C. H.: Improved batch correction in untargeted MS-based metabolomics. Metabolomics 12 (5), 88 (2016)

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Weiher, H.; Haymo, P.; Jansen-Dürr, P.; Hegenbarth, S.; Knolle, P.; Grunau, S.; Vapola, M.; Kalervo Hitunen, J.; Zwacka, R. M.; Schmelzer, E. et al.; Reumann, K.; Will, H.: Weiher H, Pircher H, Jansen-Dürr P, et al. A monoclonal antibody raised against bacterially expressed MPV17 sequences shows peroxisomal, endosomal and lysosomal localisation in U2OS cells. BMC Research Notes. 2016;9:128. doi:10.1186/s13104-016-1939-0. BMC Research Notes 9, 128 (2016)

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Weimer, A. K.; Biedermann, S.; Harashima, H.; Roodbarkelari, F.; Takahashi, N.; Foreman, J.; Guan, Y.; Pochon, G.; Heese, M.; Van Damme, D. et al.; Sugimoto, K.; Koncz, C.; Doerner, P.; Umeda, M.; Schnittger, A.: The plant-specific CDKB1-CYCB1 complex mediates homologous recombination repair in Arabidopsis. EMBO JOURNAL 35 (19), pp. 2068 - 2086 (2016)

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Westermann, A. J.; Foerstner, K. U.; Amman, F.; Barquist, L.; Chao, Y.; Schulte, L. N.; Mueller, L.; Reinhardt, R.; Stadler, P. F.; Vogel, J.: Dual RNA-seq unveils noncoding RNA functions in host-pathogen interactions. Nature 529 (7587), pp. 496 - + (2016)

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Willing, E.-M.; Piofczyk, T. P.; Albert, A.; Winkler, J. B.; Schneeberger, K.; Pecinka, A.: UVR2 ensures transgenerational genome stability under simulated natural UV-B in Arabidopsis thaliana. Nature Communications 7, 13522 (2016)

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Woehrmann, T.; Huettel, B.; Wagner, N.; Weising, K.: MICROSATELLITES FROM FOSTERELLA CHRISTOPHII (BROMELIACEAE) BY DE NOVO TRANSCRIPTOME SEQUENCING ON THE PACIFIC BIOSCIENCES RS PLATFORM. Applications in Plant Sciences 4 (1), 1500084 (2016)

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Wu, J.; Kim, S. G.; Kang, K. Y.; Kim, J.-G.; Park, S.-R.l.; Gupta, R.; Kim, Y. H.; Wang, Y.; Kim, S. T.: Overexpression of a Pathogenesis-Related Protein 10 Enhances Biotic and Abiotic Stress Tolerance in Rice. Plant Pathology Journal 32 (6), pp. 552 - 562 (2016)

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Wu, J.; Wang, Y.; Park, S.-Y.; Kim, S. G.; Yoo, J. S.; Park, S.; Gupta, R.; Kang, K. Y.; Kim, S. T.: Secreted Alpha-N-Arabinofuranosidase B Protein Is Required for the Full Virulence of Magnaporthe oryzae and Triggers Host Defences. PLoS One 11 (10), e0165149 (2016)

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Xiang, Y.; Song, B.; Née, G.; Kramer, K.; Finkemeier, I.; Soppe, W.: Sequence Polymorphisms at the REDUCED DORMANCY5 Pseudophosphatase Underlie Natural Variation in Arabidopsis Dormancy. Plant Physiology 171 (4), pp. 2659 - 2670 (2016)

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Yamada, K.; Yamaguchi, K.; Shirakawa, T.; Nakagami, H.; Mine, A.; Ishikawa, K.; Fujiwara, M.; Narusaka, M.; Narusaka, Y.; Ichimura, K. et al.; Kobayashi, Y.; Matsui, H.; Nomura, Y.; Nomoto, M.; Tada, Y.; Fukao, Y.; Fukamizo, T.; Tsuda, K.; Shirasu, K.; Shibuya, N.; Kawasaki, T.: The Arabidopsis CERK1-associated kinase PBL27 connects chitin perception to MAPK activation. EMBO Journal 35 (22), pp. 2468 - 2483 (2016)

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Yamada, K.; Yamashita-Yamada, M.; Hirase, T.; Fujiwara, T.; Tsuda, K.; Hiruma, K.; Saijo, Y.: Danger peptide receptor signaling in plants ensures basal immunity upon pathogen-induced depletion of BAK1. EMBO Journal 35 (1), pp. 46 - 61 (2016)

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Zadnikova, P.; Wabnik, K.; Abuzeineh, A.; Gallemi, M.; Van Der Straeten, D.; Smith, R. S.; Inze, D.; Friml, J.; Prusinkiewicz, P.; Benkova, E.: A Model of Differential Growth-Guided Apical Hook Formation in Plants. Plant Cell 28 (10), pp. 2464 - 2477 (2016)

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Zapata, L.; Ding, J.; Willing, E.-M.; Hartwig, B.; Bezdan, D.; Jiao, W.-B.; Patel, V.; James, G. V.; Koornneef, M.; Ossowski, S. et al.; Schneeberger, K.: Chromosome-level assembly of Arabidopsis thaliana Ler reveals the extent of translocation and inversion polymorphisms. Proceedings of the National Academy of Sciences of the United States of America 113 (28), pp. E4052 - E4060 (2016)

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Zgadzaj, R. L.; Garrido Oter, R.; Jensen, D. B.; Koprivova, A.; Schulze-Lefert, P.; Radutoiu, S.: Root nodule symbiosis in Lotus japonicus drives the establishment of distinctive rhizosphere, root, and nodule bacterial communities. Proceedings of the National Academy of Sciences of the United States of America PNAS, Proceedings of the National Academy of Sciences 113 (49), pp. E7996 - E8005 (2016)

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Zhang, P.; Zhong, K.; Tong, H.; Shahid, M. Q.; Li, J.: Association Mapping for Aluminum Tolerance in a Core Collection of Rice Landraces. Frontiers in Plant Science 7, 1415 (2016)

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Zhou, Y.; Hartwig, B.; James, G. V.; Schneeberger, K.; Turck, F.: Complementary Activities of TELOMERE REPEAT BINDING Proteins and Polycomb Group Complexes in Transcriptional Regulation of Target Genes. Plant Cell 28 (1), pp. 87 - 101 (2016)

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Andrés, F. L.; Romera Branchat, M.; Martinez-Gallegos, R.; Patel, V.; Schneeberger, K.; Jang, S.; Altmuller, J.; Nurnberg, P.; Coupland, G.: Floral Induction in Arabidopsis by FLOWERING LOCUS T Requires Direct Repression of BLADE-ON-PETIOLE Genes by the Homeodomain Protein PENNYWISE. Plant physiology 169 (3), pp. 2187 - 99 (2015)

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Bai, Y.; Mueller, D. B.; Srinivas, G.; Garrido Oter, R.; Potthoff, E.; Rott, M.; Dombrowski, N.; Muench, P. C.; Spaepen, S.; Remus-Emsermann, M. et al.; Huettel, B.; McHardy, A. C.; Vorholt, J. A.; Schulze-Lefert, P.: Functional overlap of the Arabidopsis leaf and root microbiota. Nature 528 (7582), pp. 364 - 369 (2015)

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Baranauske, S.; Mickute, M.; Plotnikova, A.; Finke, A.; Venclovas, C.; Klimasauskas, S.; Vilkaitis, G.: Functional mapping of the plant small RNA methyltransferase: HEN1 physically interacts with HYL1 and DICER-LIKE 1 proteins. Nucleic Acids Research (London) 43 (5), pp. 2802 - 2812 (2015)

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Barbier de Reuille, P.; Routier-Kierzkowska, A.-L.; Kierzkowski, D.; Bassel, G. W.; Schuepbach, T.; Tauriello, G.; Bajpai, N.; Strauss, S.; Weber, A.; Kiss, A. et al.; Burian, A.; Hofhuis, H.; Sapala, A.; Lipowczan, M.; Heimlicher, M. B.; Robinson, S.; Bayer, E. M.; Basler, K.; Koumoutsakos, P.; Roeder, A. H. K.; Aegerter-Wilmsen, T.; Nakayama, N.; Tsiantis, M.; Hay, A.; Kwiatkowska, D.; Xenarios, I.; Kuhlemeier, C.; Smith, R. S.: MorphoGraphX: A platform for quantifying morphogenesis in 4D. ELIFE 4, e05864 (2015)

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Barboza Barquero, L.; Nagel, K.A.; Jansen , M.; Klasen, J. R.; Kastenholz, B.; Braun, S.; Bleise, B.; Brehm, T.; Koornneef, M.; Fiorani, F.: Phenotype of Arabidopsis thaliana semi-dwarfs with deep roots and high growth rates under water limiting conditions is independent from the GA5 loss-of-function alleles. Annals of Botany (116), pp. 321 - 331 (2015)

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Benke, A.; Urbany, C.; Stich, B.: Genome-wide association mapping of iron homeostasis in the maize association population. BMC GENETICS 16, 1 (2015)

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Bours, R.; Kohlen, W.; Bouwmeester, H. J.; van der Krol, A.: Thermoperiodic Control of Hypocotyl Elongation Depends on Auxin-Induced Ethylene Signaling That Controls Downstream PHYTOCHROME INTERACTING FACTOR3 Activity. Plant Physiology 167 (2), pp. 517 - 530 (2015)

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Bratzel, F.; Turck, F.: Molecular memories in the regulation of seasonal flowering: from competence to cessation. Genome Biology 16 (16), 192 (2015)

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