Scientific Publications since 2002

Max Planck Institute for Plant Breeding Research

Journal Article (2416)

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Kuhl, H.; Tine, M.; Beck, A.; Timmermann, B.; Kodira, C.; Reinhardt, R.: Directed sequencing and annotation of three Dicentrarchus labrax L. chromosomes by applying Sanger- and pyrosequencing technologies on pooled DNA of comparatively mapped BAC clones. GENOMICS 98 (3), pp. 202 - 212 (2011)

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Kwaaitaal, M.; Huisman, R.; Maintz, J.; Reinstädler, A.; Panstruga, R.: Ionotropic glutamate receptor (iGluR)-like channels mediate MAMP-induced calcium influx in Arabidopsis thaliana. Biochemical Journal 440, pp. 355 - 365 (2011)

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Lenz, H. D.; Haller, E.; Melzer, E.; Kober, K.; Wurster, K.; Stahl, M.; Bassham, D. C.; Vierstra, R. D.; Parker, J. E.; Bautor, J. et al.; Molina, A.; Escudero, V.; Shindo, T.; van der Hoorn, R. A. L.; Gust, A. A.; Nurnberger, T.: Autophagy differentially controls plant basal immunity to biotrophic and necrotrophic pathogens. Plant Journal 66 (5), pp. 818 - 830 (2011)

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Li, J. Q.; Luehmann, A.-K.; Weissleder, K.; Stich, B.: Genome-wide distribution of genetic diversity and linkage disequilibrium in elite sugar beet germplasm. BMC GENOMICS 12, 10.1186/1471-2164-12-484, p. 484 (2011)

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Liu, Y.; Geyer, R.; van Zanten, M.; Carles, A.; Li, Y, Y.; Hoerold, A.; van Nocker, S.; Soppe, W. J. J.: Identification of the Arabidopsis REDUCED DORMANCY 2 Gene Uncovers a Role for the Polymerase Associated Factor 1 Complex in Seed Dormancy. PLoS One 6 (7), 10.1371/journal.pone.0022241, p. e22241 (2011)

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MacLean, A. M.; Sugio, A.; Makarova, O. V.; Findlay, K. C.; Grieve, V. M.; Toth, R.; Nicolaisen, M.; Hogenhout, S. A.: Phytoplasma Effector SAP54 Induces Indeterminate Leaf-Like Flower Development in Arabidopsis Plants. PLANT PHYSIOLOGY 157 (2), pp. 831 - 841 (2011)

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Maekawa, T.; Cheng, W.; Spiridon, L. N.; Toeller, A.; Lukasik, E.; Saijo, Y.; Liu, P. Y.; Shen, Q. H.; Micluta, M. A.; Somssich, I. E. et al.; Takken, F. L. W.; Petrescu, A. J.; Chai, J.; Schulze-Lefert, P.: Coiled-Coil Domain-Dependent Homodimerization of Intracellular Barley Immune Receptors Defines a Minimal Functional Module for Triggering Cell Death. Cell Host & Microbe 9 (3), pp. 187 - 199 (2011)

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Maekawa, T.; Kufer, T. A.; Schulze-Lefert, P.: NLR functions in plant and animal immune systems: so far and yet so close. NATURE IMMUNOLOGY 12 (9), pp. 818 - 826 (2011)

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Marco, F.; Alcazar, R.; Tiburcio, A.; Carrasco, P.: Interactions between Polyamines and Abiotic Stress Pathway Responses Unraveled by Transcriptome Analysis of Polyamine Overproducers. OMICS-A JOURNAL OF INTEGRATIVE BIOLOGY 15 (11), pp. 775 - 781 (2011)

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Martin-Trillo, M.; Gonzalez Grandio, E.; Serra, F.; Marcel, F.; Luisa Rodriguez-Buey, M.; Schmitz, G.; Theres, K.; Bendahmane, A.; Dopazo, H.; Cubas, P.: Role of tomato BRANCHED1-like genes in the control of shoot branching. PLANT JOURNAL 67 (4), pp. 701 - 714 (2011)

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Micali, C. O.; Neumann, U.; Grunewald, D.; Panstruga, R.; O'Connell, R.: Biogenesis of a specialized plant–fungal interface during host cell internalization of Golovinomyces orontii haustoria. Cellular Microbiology 13, pp. 210 - 226 (2011)

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Misas-Villamil, J.; Kolodziejek, I.; Van der Hoorn, R. L.: Pseudomonas syringae colonizes distant tissues in Nicotiana benthamiana through xylem vessels. PLANT JOURNAL 67 (5), pp. 774 - 782 (2011)

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Muller, B. U.; Stich, B.; Piepho, H. P.: A general method for controlling the genome-wide type I error rate in linkage and association mapping experiments in plants. Heredity 106 (5), pp. 825 - 831 (2011)

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Nakamura, Y.; Mithofer, A.; Kombrink, E.; Boland, W.; Hamamoto, S.; Uozumi, N.; Tohma, K.; Ueda, M.: 12-Hydroxyjasmonic Acid Glucoside Is a COI1-JAZ-Independent Activator of Leaf-Closing Movement in Samanea saman. Plant Physiology 155 (3), pp. 1226 - 1236 (2011)

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Pecinka, A.; Fang, W.; Rehmsmeier, M.; Levy, A. A.; Scheid, O. M.: Polyploidization increases meiotic recombination frequency in Arabidopsis. BMC Biology 9, 24 (2011)

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Peeters, A.; Fraisl, P.; van den Berg , S.; Ver Loren van Themaat, E.; Van Kampen , A.; Rider , M. H.; Takemori, H.; Willems van Dijk , K.; Van Veldhoven , P. P.; Carmeliet, P. et al.; Baes, M.: Carbohydrate metabolism is perturbed in peroxisome deficient hepatocytes due to mitochondrial dysfunction, AMP activated protein kinase (AMPK) activation and peroxisome proliferator-activated receptor {gamma} coactivator 1{alpha} (PGC-1{alpha}) suppression. The Journal of Biological Chemistry 286, pp. 42162 - 42179 (2011)

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Pfalz, M.; Mikkelsen, M. D.; Bednarek, P.; Olsen, C. E.; Halkier, B. A.; Kroymann, J.: Metabolic Engineering in Nicotiana benthamiana Reveals Key Enzyme Functions in Arabidopsis Indole Glucosinolate Modification. Plant Cell 23 (2), pp. 716 - 729 (2011)

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Raatz, B.; Eicker, A.; Schmitz, G.; Fuss, E.; Mueller, D.; Rossmann, S.; Theres, K.: Specific expression of LATERAL SUPPRESSOR is controlled by an evolutionarily conserved 3 ' enhancer. PLANT JOURNAL 68 (3), pp. 400 - 412 (2011)

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Ramasubramanian, S. K.; Van der Hoorn, R. A. L.: A structural biology perspective on bioactive small molecules and their plant targets. Current Opinion in Plant Biology 14 (5), pp. 480 - 488 (2011)

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Richau, K. H.; Van der Hoorn, R. A. L.: Studies on plant-pathogen interactions using activity-based proteomics. Current Proteomics 7, pp. 328 - 336 (2011)

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Rietz, S.; Stamm, A.; Malonek, S.; Wagner, S.; Becker, D.; Medina-Escobar, N.; Vlot, A. C.; Feys, B. J.; Niefind, K.; Parker, J. E.: Different roles of Enhanced Disease Susceptibility1 (EDS1) bound to and dissociated from Phytoalexin Deficient4 (PAD4) in Arabidopsis immunity. New Phytologist 191 (1), pp. 107 - 119 (2011)

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Saal, B.; von Korff, M.; Leon, J.; Pillen, K.: Advanced-backcross QTL analysis in spring barley: IV. Localization of QTL x nitrogen interaction effects for yield-related traits. Euphytica 177 (2), pp. 223 - 239 (2011)

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Sanchez, A.; Shin, J.; Davis, S. J.: Abiotic Stress and the plant circadian clock. Plant Signaling & Behavior 6, pp. 1 - 9 (2011)

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Sattarzadeh, A.; Schmelzer, E.; Hanson, M. R.: Analysis of organelle targeting by DIL domains of the Arabidopsis myosin XI family. Frontiers in Plant Science 2, 10.3389/fpls.2011.00072, p. 72 (2011)

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Schmidt, S. M.; Panstruga, R.: Pathogenomics of fungal plant parasites: what have we learnt about pathogenesis? Current Opinion in Plant Biology 14 (4), pp. 392 - 399 (2011)

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Schneeberger, K.; Ossowski, S.; Ott, F.; Klein, J. D.; Wang, X.; Lanz, C.; Smith, L. M.; Cao, J.; Fitz, J.; Warthmann, N. et al.; Henz, S. R.; Huson, D. H.; Weigel, D.: Reference-guided assembly of four diverse Arabidopsis thaliana genomes. Proceedings of the National Academy of Sciences of the United States of America 108 (25), pp. 10249 - 10254 (2011)

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Schneeberger, K.; Weigel, D.: Fast-forward genetics enabled by new sequencing technologies. Trends in Plant Science 16 (5), pp. 282 - 288 (2011)

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Schulte, L. N.; Eulalio, A.; Mollenkopf, H. J.; Reinhardt, R.; Vogel, J.: Analysis of the host microRNA response to Salmonella uncovers the control of major cytokines by the let-7 family. EMBO Journal 30 (10), pp. 1977 - 1989 (2011)

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Schulze-Lefert, P.; Panstruga, R.: A molecular evolutionary concept connecting nonhost resistance, pathogen host range, and pathogen speciation. Trends in Plant Science 16, pp. 117 - 125 (2011)

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Shirzadi, R.; Andersen, E. D.; Bjerkan, K. N.; Gloeckle, B. M.; Heese, M.; Ungru, A.; Winge, P.; Koncz, C.; Aalen, R. B.; Schnittger, A. et al.; Grini, P. E.: Genome-Wide Transcript Profiling of Endosperm without Paternal Contribution Identifies Parent-of-Origin-Dependent Regulation of AGAMOUS-LIKE36. PLoS Genetics 7 (2), e1001303 (2011)

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Silady, R. A.; Effgen, S.; Koornneef, M.; Reymond, M.: Variation in Seed Dormancy Quantitative Trait Loci in Arabidopsis thaliana Originating from One Site. PLoS ONE 6 (6), e20886 (2011)

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Stein, H.; Honig, A.; Miller, G.; Erster, O.; Eilenberg, H.; Csonka, L. N.; Szabados, L.; Koncz, C.; Zilberstein, A.: Elevation of free proline and proline-rich protein levels by simultaneous manipulations of proline biosynthesis and degradation in plants. PLANT SCIENCE 181 (2), pp. 140 - 150 (2011)

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Stenvalla, J.; Fierro-González, J. C.; Swoboda, P.; Saamarthy, K.; Cheng, Q.; Cacho-Valadez, P.; Arnér, E. S. J.; Persson, O.; Miranda-Vizuete, A.; Tuck, S.: Selenoprotein TRXR-1 and GSR-1 are essential for removal of old cuticle during molting in Caenorhabditis elegans. Proceedings of the National Academy of Sciences 108, 10.1073/pnas.1006328108, pp. 1064 - 1069 (2011)

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Stich, B.; Gebhardt, C.: Detection of epistatic interactions in association mapping populations: an example from tetraploid potato. Heredity 107, doi: 10.1038/hdy.2011.40, pp. 537 - 547 (2011)

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Stolle, E.; Wilfert, L.; Schmid-Hempel, R.; Schmid-Hempel, P.; Kube, M.; Reinhardt, R.; Moritz, R. F. A.: A second generation genetic map of the bumblebee Bombus terrestris (Linnaeus, 1758) reveals slow genome and chromosome evolution in the Apidae. BMC Genomics 12, 48 (2011)

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Stuttmann, J.; Hubberten, H.-M.; Rietz, S.; Kaur, J.; Muskett, P.; Guerois, R.; Bednarek, P.; Hoefgen, R.; Parker, J. E.: Perturbation of Arabidopsis Amino Acid Metabolism Causes Incompatibility with the Adapted Biotrophic Pathogen Hyaloperonospora arabidopsidis. PLANT CELL 23 (7), pp. 2788 - 2803 (2011)

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Tine, M.; Kuhl, H.; Beck, A.; Bargelloni, L.; Reinhardt, R.: Comparative analysis of intronless genes in teleost fish genomes: Insights into their evolution and molecular function. Marine Genomics 4 (2), pp. 109 - 119 (2011)

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Tramontano, A.; Donath, A.; Bernhart, S. H.; Reiche, K.; Boehmdorfer, G.; Stadler, P. F.; Bachmair, A.: Deletion analysis of the 3 ' long terminal repeat sequence of plant retrotransposon Tto1 identifies 125 base pairs redundancy as sufficient for first strand transfer. VIROLOGY 412 (1), pp. 75 - 82 (2011)

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Turck, F.; Coupland, G.: When Vernalization Makes Sense. Science 331 (6013), pp. 36 - 37 (2011)

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Ufaz, S.; Shukla, V.; Soloveichik, Y.; Golan, Y.; Breuer, F.; Koncz, Z.; Galili, G.; Koncz, C.; Zilberstein, A.: Transcriptional control of aspartate kinase expression during darkness and sugar depletion in Arabidopsis: involvement of bZIP transcription factors. Planta 233 (5), pp. 1025 - 1040 (2011)

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Uppalapati, S. R.; Ishiga, Y.; Ryu, C. M.; Ishiga, T.; Wang, K.; Noël, L. D.; Parker, J. E.; Mysore, K. S.: SGT1 contributes to coronatine signaling and Pseudomonas syringae pv. tomato disease symptom development in tomato and Arabidopsis. New Phytologist 189 (1), pp. 83 - 93 (2011)

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Urbany, C.; Stich, B.; Schmidt, L.; Simon, L.; Berding, H.; Junghans, H.; Niehoff, K. H.; Braun, A.; Tacke, E.; Hofferbert, H. R. et al.; Lubeck, J.; Strahwald, J.; Gebhardt, C.: Association genetics in Solanum tuberosum provides new insights into potato tuber bruising and enzymatic tissue discoloration. BMC Genomics 12, 7 (2011)

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Van der Hoorn, R. A. L.; Colby, T.; Nickel, S.; Richau, K. H.; Schmidt, J.; Kaiser, M.: Mining the active proteome of Arabidopsis thaliana. Frontiers in Plant Science 2, 10.3389/fpls.2011.00089, p. 89 (2011)

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van Zanten, M.; Koini, M. A.; Geyer, R.; Liu, Y.; Brambilla, V.; Bartels, D.; Koornneef, M.; Fransz, P.; Soppe, W. J. J.: Seed maturation in Arabidopsis thaliana is characterized by nuclear size reduction and increased chromatin condensation. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 108 (50), pp. 20219 - 20224 (2011)

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Vashisht, D.; Hesselink, A.; Pierik, R.; Ammerlaan, H.; Bailey-Serres, J.; Visser, E. J. W.; Pedersen, O.; van Zanten, M.; Vreugdenhil, D.; Jamar, D. C. L. et al.; Voesenek, L. A. C. J.; Sasidharan, R.: Natural variation of submergence tolerance among Arabidopsis thaliana accessions. New Phytologist 190, DOI: 10.1111/j.1469-8137.2010.03552.x, pp. 299 - 310 (2011)

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Wagner, S.; Rietz, S.; Parker, J. E.; Niefind, K.: Crystallization and preliminary crystallographic analysis of Arabidopsis thaliana EDS1, a key component of plant immunity, in complex with its signalling partner SAG101. Acta Crystallographica Section F-Structural Biology and Crystallization Communications 67, pp. 245 - 248 (2011)

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Waldmueller, S.; Erdmann, J.; Binner, P.; Gelbrich, G.; Pankuweit, S.; Geier, C.; Timmermann, B.; Haremza, J.; Perrot, A.; Scheer, S. et al.; Wachter, R.; Schulze-Waltrup, N.; Dermintzoglou, A.; Schoenberger, J.; Zeh, W.; Jurmann, B.; Brodherr, T.; Boergel, J.; Farr, M.; Milting, H.; Blankenfeldt, W.; Reinhardt, R.; Oezcelik, C.; Osterziel, K.-J.; Loeffler, M.; Maisch, B.; Regitz-Zagrosek, V.; Schunkert, H.; Scheffold, T.: Novel correlations between the genotype and the phenotype of hypertrophic and dilated cardiomyopathy: results from the German Competence Network Heart Failure. EUROPEAN JOURNAL OF HEART FAILURE 13 (11), pp. 1185 - 1192 (2011)

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Wang, R. H.; Albani, M. C.; Vincent, C.; Bergonzi, S.; Luan, M.; Bai, Y.; Kiefer, C.; Castillo, R.; Coupland, G.: Aa TFL1 Confers an Age-Dependent Response to Vernalization in Perennial Arabis alpina. Plant Cell 23 (4), pp. 1307 - 1321 (2011)

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Winter, C. M.; Austin, R. S.; Blanvillain-Baufume, S.; Reback, M. A.; Monniaux, M.; Wu, M. F.; Sang, Y.; Yamaguchi, A.; Yamaguchi, N.; Parker, J. E. et al.; Parcy, F.; Jensen, S. T.; Li, H. Z.; Wagner, D.: LEAFY Target Genes Reveal Floral Regulatory Logic, cis Motifs, and a Link to Biotic Stimulus Response. Developmental Cell 20 (4), pp. 430 - 443 (2011)

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Young, N. D.; Debelle, F.; Oldroyd, G. E. D.; Geurts, R.; Cannon, S. B.; Udvardi, M. K.; Benedito, V. A.; Mayer, K. F. X.; Gouzy, J.; Schoof, H. et al.; Van de Peer, Y.; Proost, S.; Cook, D.R.; Meyers, B. C.; Spannagl, M.; Cheung, F.; De Mita, S.; Krishnakumar, V.; Gundlach, H.; Zhou, S.; Mudge, J.; Bharti, A. K.; Murray, J. D.; Naoumkina, M. A.; Rosen, B.; Silverstein, K. A. T.; Tang, H.; Rombauts, S.; Zhao, P. X.; Zhou, P.; Barbe, V.; Bardou, P.; Bechner, M.; Bellec, A.; Berger, A.; Berges, H.; Bidwell, S.; Bisseling, T.; Choisne, N.; Couloux, A.; Denny, R.; Deshpande, S.; Dai, X.; Doyle, J.; Dudez, A.-M.; Farmer, A. D.; Fouteau, S.; Franken, C.; Gibelin, C.; Gish, J.; Goldstein, S.; Gonzalez, A. J.; Green, P. J.; Hallab, A.; Hartog, M.; Hua, A.; Humphray, S.J.; Jeong, D.-H.; Jing, Y.; Joecker, A.; Kenton, S. M.; Kim, D.-J.; Klee, K.; Lai, H.; Lang, C.; Lin, S.; Macmil, S. L.; Magdelenat, G.; Matthews, L.; McCorrison, J.; Monaghan, E.L.; Mun, J.-H.; Najar, F. Z.; Nicholson, C.; Noirot, C.; O'Bleness, M.; Paule, C.R.; Poulain, J.; Prion, F.; Qin, B.; Qu, C.; Retzel, E. F.; Riddle, C.; Sallet, E.; Samain, S...; Samson, N.; Sanders, I.; Saurat, O.; Scarpelli, C.; Schiex, T.; Segurens, B.; Severin, A. J.; Sherrier, D. J.; Shi, R.; Sims, S.; Singer, S. R.; Sinharoy, S.; Sterck, L.; Viollet, A.; Wang, B.-B.; Wang, K.; Wang, M.; Wang, X.; Warfsmann, J.; Weissenbach, J.; White, D. D.; White, J. D.; Wiley, G. B.; Wincker, P.; Xing, Y.; Yang, L.; Yao, Z.; Ying, F.; Zhai, J.; Zhou, L.; Zuber, A.; Denarie, J.; Dixon, R.A.; May, G. D.; Schwartz, D. C.; Rogers, J.; Quetier, F.; Town, C. D.; Roe, B. A.: The Medicago genome provides insight into the evolution of rhizobial symbioses. NATURE 480 (7378), pp. 520 - 524 (2011)

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