Scientific Publications since 2002 | Max Planck Institute for Plant Breeding Research

Max Planck Institute for Plant Breeding Research

Journal Article (119)

Journal Article

Kougioumoutzi, E.; Cartolano, M.; Canales, C.; Dupre, M.; Bramsiepe, J.; Vlad, D.; Rast, M.; Dello Ioio, R.; Tattersall, A.; Schnittger, A. et al.; Hay, A.; Tsiantis, M.: SIMPLE LEAF3 encodes a ribosome-associated protein required for leaflet development in Cardamine hirsuta. The Plant Journal 73 (4), pp. 533 - 545 (2013)

MPG.PuRe

Journal Article

Krogh Jensen, M.; Lindemose, S.; de Masi, F.; Reimer, J. J.; Nielsen, M.; Perera, V.; Workman, C. T.; Turck, F.; Grant, M.; Mundy, J. et al.; Petersen, M.; Skriver, K.: ATAF1 transcription factor directly regulates abscisic acid biosynthetic gene NCED3 in Arabidopsis thaliana. FEBS Open Bio 3, pp. 321 - 327 (2013)

MPG.PuRe

publisher-version

Journal Article

Kundu, N.; Dozier, U.; Deslandes, L.; Somssich, I. E.; Ullah, H.: Arabidopsis scaffold protein RACK1A interacts with diverse environmental stress and photosynthesis related proteins. Plant Signaling & Behavior 8 (5), e24012 (2013)

MPG.PuRe

publisher-version

Journal Article

Li, L.; Tacke, E.; Hofferbert, H.-R.; Luebeck, J.; Strahwald, J.; Draffehn, A.; Walkemeier, B.; Gebhardt, C.: Validation of candidate gene markers for marker-assisted selection of potato cultivars with improved tuber quality. Theoretical and Applied Genetics 126 (4), pp. 1039 - 1052 (2013)

MPG.PuRe

Journal Article

Logemann, E.; Birkenbihl, R.; Rawat, V.; Schneeberger, K.; Schmelzer, E.; Somssich, I. E.: Functional dissection of the PROPEP2 and PROPEP3 promoters reveals the importance of WRKY factors in mediating microbe-associated molecular pattern-induced expression. New Phytologist 198 (4), pp. 1165 - 1177 (2013)

MPG.PuRe

Journal Article

Lorek, J.; Griebel, T.; Jones, A. M.; Kuhn, H.; Panstruga, R.: The Role of Arabidopsis Heterotrimeric G-Protein Subunits in MLO2 Function and MAMP-Triggered Immunity. Molecular Plant-Microbe Interactions 26 (9), pp. 991 - 1003 (2013)

MPG.PuRe

Journal Article

Lota, F.; Wegmüller, S.; Buer, B.; Sato, S.; Bräutigam, A.; Hanf, B.; Bucher, M.: The cis‐acting CTTC–P1BS module is indicative for gene function of LjVTI12, a Qb‐SNARE protein gene that is required for arbuscule formation in Lotus japonicus. The Plant Journal 74, pp. 280 - 293 (2013)

MPG.PuRe

Journal Article

Lovell, J. T.; Aliyu, O. M.; Mau, M.; Schranz, M. E.; Koch, M.; Kiefer, C.; Song, B.-H.; Mitchell-Olds, T.; Sharbel, T. F.: On the origin and evolution of apomixis in Boechera. PLANT REPRODUCTION 26 (4), pp. 309 - 315 (2013)

MPG.PuRe

Journal Article

Lozano-Duran, R.; Macho, A. P.; Boutrot, F.; Segonzac, C.; Somssich, I. E.; Zipfel, C.: The transcriptional regulator BZR1 mediates trade-off between plant innate immunity and growth. ELIFE 2, e00983 (2013)

MPG.PuRe

Journal Article

Lu, H.; Wang, Z.; Shabab, M.; Oeljeklaus, J.; Verhelst, S. H.; Kaschani, F.; Kaiser, M.; Bogyo, M.; Van der Hoorn, R. A. L.: A substrate-inspired probe monitors translocation, activation, and subcellular targeting of bacterial type III effector protease AvrPphB. Chemistry and Biology 20 (2), pp. 137 - 138 (2013)

MPG.PuRe

Journal Article

Mann, A. J.; Hahnke, R. L.; Huang, S.; Werner, J.; Xing, P.; Barbeyon, T.; Huettel, B.; Stüber, K.; Reinhardt, R.: The Genome of the Alga-Associated Marine Flavobacterium Formosa agariphila KMM 3901T Reveals a Broad Potential for Degradation of Algal Polysaccharides. Applied and Environmental Microbiology 79, pp. 6813 - 6822 (2013)

MPG.PuRe

Journal Article

Misas-Villamil, J.; Kolodziejek, I.; Crabill, E.; Kaschani, F.; Niessen, S.; Shindo, T.; Kaiser, M.; Alfano, J. R.; Van der Hoorn, R. A. L.: Pseudomonas syringae pv. syringae Uses Proteasome Inhibitor Syringolin A to Colonize from Wound Infection Sites. PLoS Pathogens 9 (3), e1003281 (2013)

MPG.PuRe

Journal Article

Misas-Villamil, J.; Toenges, G.; Kolodziejek, I.; Sadaghiani, A. M.; Kaschani, F.; Colby, T.; Bogyo, M.; Van der Hoorn, R. A. L.: Activity profiling of vacuolar processing enzymes reveals a role for VPE during oomycete infection. The Plant Journal 73 (4), DOI: 10.1111/tpj.12062, pp. 689 - 700 (2013)

MPG.PuRe

Journal Article

Mueller, B. U.; Stich, B.; Piepho, H.-P.: Response to 'Controlling type 1 error rates in genome-wide association studies in plants' by Andrew W George. HEREDITY 111 (1), p. 88 - 88 (2013)

MPG.PuRe

Journal Article

Naz, A. A.; Raman, S.; Martinez, C. C.; Sinha, N. R.; Schmitz, G.; Theres, K.: Trifoliate encodes an MYB transcription factor that modulates leaf and shoot architecture in tomato. Proceedings of the National Academy of Sciences of the United States of America 110 (6), pp. 2401 - 2406 (2013)

MPG.PuRe

Journal Article

Nguyen, H. M.; Schippers, J. H. M.; Goni-Ramos, O.; Christoph, M. P.; Dortay, H.; Van der Hoorn, R. L.; Mueller-Roeber, B.: An upstream regulator of the 26S proteasome modulates organ size in Arabidopsis thaliana. The Plant Journal 74 (1), pp. 25 - 36 (2013)

MPG.PuRe

Journal Article

Nordstroem, K.; Albani, M.; James, G. V.; Gutjahr, C.; Hartwig, B.; Turck, F.; Paszkowski, U.; Coupland, G.; Schneeberger, K.: Mutation identification by direct comparison of whole-genome sequencing data from mutant and wild-type individuals using k-mers. Nature biotechnology 31 (4), pp. 325 - 330 (2013)

MPG.PuRe

Journal Article

Norousi, R.; Wickles, S.; Leidig, C.; Becker, T.; Schmid, V. J.; Beckmann, R.; Tresch, A.: Automatic post-picking using MAPPOS improves particle image detection from cryo-EM micrographs. Journal of Structural Biology 182 (2), pp. 59 - 66 (2013)

MPG.PuRe

Journal Article

Padmanabhan, M. S.; Ma, S.; Burch-Smith, T. M.; Czymmek, K.; Huijser, P.; Dinesh-Kumar, S. P.: Novel Positive Regulatory Role for the SPL6 Transcription Factor in the N TIR-NB-LRR Receptor-Mediated Plant Innate Immunity. PLoS Pathogens 9 (3), e1003235 (2013)

MPG.PuRe

publisher-version

Journal Article

Pecinka, A.; Abdelsamad, A.; Vu, G. T. H.: Hidden genetic nature of epigenetic natural variation in plants. Trends in Plant Science 18 (11), pp. 625 - 632 (2013)

MPG.PuRe

Journal Article

Pomeranz, M.; Campbell, J.; Siegal-Gaskins, D.; Engelmeier, J.; Wilson, T.; Fernandez, V.; Brkljacic, J.; Grotewold, E.: High-resolution computational imaging of leaf hair patterning using polarized light microscopy. The Plant Journal 73 (4), pp. 701 - 708 (2013)

MPG.PuRe

Journal Article

Poraty-Gavra, L.; Zimmermann, P.; Haigis, S.; Bednarek, P.; Hazak, O.; Stelmakh, O. R.; Sadot, E.; Schulze-Lefert, P.; Gruissem, W.; Yalovsky, S.: The Arabidopsis Rho of Plants GTPase AtROP6 Functions in Developmental and Pathogen Response Pathways. Plant Physiology 161 (3), pp. 1172 - 1188 (2013)

MPG.PuRe

Journal Article

Pretsch, K.; Kemen, A.; Kemen, E.; Geiger, M.; Mendgen, K.; Voegele, R.: The rust transferred proteins—a new family of effector proteins exhibiting protease inhibitor function. Molecular Plant Pathology 14, pp. 96 - 107 (2013)

MPG.PuRe

Journal Article

Rabie El-Akhal, M.; Colby, T.; Cantoral, J. M.; Harzen, A.; Schmidt, J.; Javier Fernandez-Acero, F.: Proteomic analysis of conidia germination in Colletotrichum acutatum. Archives of Microbiology 195 (4), pp. 227 - 246 (2013)

MPG.PuRe

Journal Article

Reimer, R.; Stich, B.; Melchinger, A. E.; Schrag, A. P.; Sorensen, P.; Stamp, P.; Hund, A.: Root response to temperature-extremes: an association mapping in temperate maize. Maydica 58 (2), pp. 156 - 168 (2013)

MPG.PuRe

Journal Article

Rigo, G.; Ayaydin, F.; Tietz, O.; Zsigmond, L.; Kovacs, H.; Pay, A.; Salchert, K.; Darula, Z.; Medzihradszky, K. F.; Szabados, L. et al.; Palme, K.; Koncz, C.; Cseplo, A.: Inactivation of Plasma Membrane-Localized CDPK-RELATED KINASE5 Decelerates PIN2 Exocytosis and Root Gravitropic Response in Arabidopsis. The Plant Cell 25 (5), pp. 1592 - 1608 (2013)

MPG.PuRe

Journal Article

Roccaro, M.; Ahmadinejad, N.; Colby, T.; Somssich, I. E.: Identification of functional cis-regulatory elements by sequential enrichment from a randomized synthetic DNA library. BMC Plant Biology 13, 164 (2013)

MPG.PuRe

publisher-version

Journal Article

Rollins, J.; Drosse, B.; Mulki, M. A.; Grando, S.; Baum, S.; Singh, M.; Ceccarelli , S.; von Korff, M.: Variation at the vernalisation genes Vrn-H1 and Vrn-H2 determines growth and yield stability in barley (Hordeum vulgare) grown under dryland conditions in Syria. Theoretical and Applied Genetics 126 (11), pp. 2803 - 2824 (2013)

MPG.PuRe

Journal Article

Rollins, J.; Habte, E.; Templer, S. E.; Colby, T.; Schmidt, J.; von Korff, M.: Leaf proteome alterations in the context of physiological and morphological responses to drought and heat stress in barley (Hordeum vulgare L.). Journal of Experimental Botany 64 (11), pp. 3201 - 3212 (2013)

MPG.PuRe

Journal Article

Saini, R.; Szpotkoski, K.; Kozak, M.; Jaskolski, M.; Davis, S. J.: Biochemical and structural studies of plant circadian clock proteins. BioTechnologia 94 (1), pp. 40 - 41 (2013)

MPG.PuRe

Journal Article

Sánchez Villarreal, A.; Shin, J.; Bujdoso, N.; Obata, T.; Neumann, U.; Du, S.; Ding, Z.; Davis, A. M.; Shindo, T.; Schmelzer, E. et al.; Sulpice, R.; Nunes-Nesi, A.; Stitt, M.; Fernie, A. R.; Davis, S. J.: TIME FOR COFFEE is an essential component in the maintenance of metabolic homeostasis in Arabidopsis thaliana. The Plant Journal 76 (2), pp. 188 - 200 (2013)

MPG.PuRe

Journal Article

Sarnowska, E.; Rolicka, A. T.; Bucior, E.; Cwiek, P.; Tohge, T.; Fernie, A. R.; Jikumaru, Y.; Kamiya, Y.; Franzen, R.; Schmelzer, E. et al.; Porri, A.; Sacharowski, S.; Gratkowska, D. M.; Zugaj, D. L.; Taff, A.; Zalewska, A.; Archacki, R.; Davis, S. J.; Coupland, G.; Koncz, C.; Jerzmanowski, A.; Sarnowski, T. J.: DELLA-Interacting SWI3C Core Subunit of Switch/Sucrose Nonfermenting Chromatin Remodeling Complex Modulates Gibberellin Responses and Hormonal Cross Talk in Arabidopsis. Plant Physiology 163 (1), pp. 305 - 317 (2013)

MPG.PuRe

Journal Article

Sattarzadeh, A.; Schmelzer, E.; Hanson, M. R.: Arabidopsis myosin XI sub-domains homologous to the yeast myo2p organelle inheritance sub-domain target subcellular structures in plant cells. Frontiers in Plant Science 4, 407 (2013)

MPG.PuRe

publisher-version

Journal Article

Schlicht, M.; Kombrink, E.: The role of nitric oxide in the interaction of Arabidopsis thaliana with the biotrophic fungi, Golovinomyces orontii and Erysiphe pisi. FRONTIERS IN PLANT SCIENCE 4, 351 (2013)

MPG.PuRe

publisher-version

Journal Article

Schlicht, M.; Ludwig-Mueller, J.; Burbach, C.; Volkmann, D.; Baluska, F.: Indole-3-butyric acid induces lateral root formation via peroxisome-derived indole-3-acetic acid and nitric oxide. SI 200 (2), pp. 473 - 482 (2013)

MPG.PuRe

Journal Article

Schön, M.; Töller, A.; Diezel, C.; Roth, C.; Westphal, L.; Wiermer, M.; Somssich, I. E.: Analyses of wrky18 wrky40 Plants Reveal Critical Roles of SA/EDS1 Signaling and Indole-Glucosinolate Biosynthesis for Golovinomyces orontii Resistance and a Loss-of Resistance Towards Pseudomonas syringae pv. tomato AvrRPS4. Molecular Plant-Microbe Interactions 26 (7), pp. 758 - 767 (2013)

MPG.PuRe

Journal Article

Sedlazeck, F. J.; Talloji, P.; von Haeseler, A.; Bachmair, A.: Benefit-of-doubt (BOD) scoring: A sequencing-based method for SNP candidate assessment from high to medium read number data sets. GENOMICS 101 (3), pp. 204 - 209 (2013)

MPG.PuRe

Journal Article

Sharlach, M.; Dahlbeck, D.; Liu, L.; Chiu, J.; Jimenez-Gomez, J. M.; Kimura, S.; Koenig, D.; Maloof, J. N.; Sinha, N.; Minsavage, G. V. et al.; Jones, J. B.; Stall, R. E.; Staskawicz, B. J.: Fine genetic mapping of RXopJ4, a bacterial spot disease resistance locus from Solanum pennellii LA716. Theoretical and Applied Genetics 126, 10.1007/s00122-012-2004-6, pp. 601 - 609 (2013)

MPG.PuRe

Journal Article

Shin, J.; Anwer, M. U.; Davis, S. J.: Phytochrome-Interacting Factors (PIFs) as Bridges between Environmental Signals and the Circadian Clock: Diurnal Regulation of Growth and Development. MOLECULAR PLANT 6 (3), pp. 592 - 595 (2013)

MPG.PuRe

Journal Article

Shin, J.; Du, S.; Bujdoso, N.; Hu, Y.; Davis, S. J.: Overexpression and Loss-of-function at TIME FOR COFFEE Results in Similar Phenotypes in Diverse Growth and Physiological Responses. JOURNAL OF PLANT BIOLOGY 56 (3), pp. 152 - 159 (2013)

MPG.PuRe

Journal Article

Spallek, T.; Beck, M.; Ben Khaled, S.; Salomon, S.; Bourdais, G.; Schellmann, S.; Robatzek, S.: ESCRT-I Mediates FLS2 Endosomal Sorting and Plant Immunity. PLOS Genetics 9 (12), e1004035 (2013)

MPG.PuRe

publisher-version

Journal Article

Staiger, D.; Shin, J.; Johansson, M.; Davis, S. J.: The circadian clock goes genomic. GENOME BIOLOGY 14 (6), 208 (2013)

MPG.PuRe

publisher-version

Journal Article

Stich, B.; Urbany, C.; Hoffmann, P.; Gebhardt, C.: Population structure and linkage disequilibrium in diploid and tetraploid potato revealed by genome-wide high-density genotyping using the SolCAP SNP array. PLANT BREEDING 132 (6), pp. 718 - 724 (2013)

MPG.PuRe

publisher-version

Journal Article

Sun, M.; Schwalb, B.; Pirkl, N.; Maier, K. C.; Schenk, A.; Failmezger, H.; Tresch, A.; Cramer, P.: Global Analysis of Eukaryotic mRNA Degradation Reveals Xrn1-Dependent Buffering of Transcript Levels. Molecular Cell 52 (1), pp. 52 - 62 (2013)

MPG.PuRe

Journal Article

Terecskei, K.; Tóth, R.; Gyula, P.; Kevei, E.; Bindics, J.; Coupland, G.; Nagy, F.; Kozma-Bognár, L.: The Circadian Clock-Associated Small GTPase LIGHT INSENSITIVE PERIOD1 Suppresses Light-Controlled Endoreplication and Affects Tolerance to Salt Stress in Arabidopsis. Plant Physiology 161, pp. 278 - 290 (2013)

MPG.PuRe

publisher-version

Journal Article

Tintor, N.; Ross, A.; Kanehara, K.; Yamada, K.; Fan, L.; Kemmerling, B.; Nuernberger, T.; Tsuda, K.; Saijo, Y.: Layered pattern receptor signaling via ethylene and endogenous elicitor peptides during Arabidopsis immunity to bacterial infection. Proceedings of the National Academy of Sciences of the United States of America 110 (15), pp. 6211 - 6216 (2013)

MPG.PuRe

publisher-version

Journal Article

Tomanov, K.; Hardtke, C.; Budhiraja, R.; Hermkes, R.; Coupland, G.; Bachmair, A.: Small Ubiquitin-Like Modifier Conjugating Enzyme with Active Site Mutation Acts as Dominant Negative Inhibitor of SUMO Conjugation in Arabidopsis. Journal of Integrative Plant Biology 55 (1), pp. 75 - 82 (2013)

MPG.PuRe

Journal Article

Tsuda, K.; Mine, A.; Bethke, G.; Igarashi, D.; Botanga, C. J.; Tsuda, Y.; Glazebrook, J.; Sato, M.; Katagiri, F.: Dual Regulation of Gene Expression Mediated by Extended MAPK Activation and Salicylic Acid Contributes to Robust Innate Immunity in Arabidopsis thaliana. PLOS GENETICS 9 (12), e1004015 (2013)

MPG.PuRe

publisher-version

Journal Article

Urbany, C.; Benke, A.; Marsian, J.; Huettel, B.; Reinhardt, R.; Stich, B.: Ups and downs of a transcriptional landscape shape iron deficiency associated chlorosis of the maize inbreds B73 and Mo17. BMC Plant Biology 13, 213 (2013)

MPG.PuRe

publisher-version

Journal Article

Vieira, F. A.; Thorne , M. A. S.; Stüber, K.; Darias, M.; Reinhardt, R.; Clark, M. S.; Gisbert, E.; Power, D. M.: Comparative analysis of a teleost skeleton transcriptome provides insight into its regulation. General and Comparative Endocrinology 191, pp. 45 - 58 (2013)

MPG.PuRe