Journal Article (132)

Journal Article
Kaschani, F.; Nickel, S.; Pandey, B.; Cravatt, B. F.; Kaiser, M.; Van der Hoorn, R. A. L.: Selective inhibition of plant serine hydrolases by agrochemicals revealed by competitive ABPP. Bioorganic & Medicinal Chemistry 20 (2), pp. 597 - 600 (2012)
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Khan, M. R.; Hu, J. Y.; Ali, G. M.: Reciprocal Loss of CArG-Boxes and Auxin Response Elements Drives Expression Divergence of MPF2-Like MADS-Box Genes Controlling Calyx Inflation. PLoS One 7 (8), e42781 (2012)
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Khan, M. R.; Hu, J. Y.; He, C.: Plant hormones including ethylene are recruited in calyx inflation in Solanaceous plants. Journal of Plant Physiology 169 (10), pp. 940 - 948 (2012)
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Kiefer, C.; Koch, M. A.: A Continental-Wide Perspective: The Genepool of Nuclear Encoded Ribosomal DNA and Single-Copy Gene Sequences in North American Boechera (Brassicaceae). PLoS One 7 (5), e36491 (2012)
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Kim, J. J.; Lee, J. H.; Kim, W.; Jung, H. S.; Huijser, P.; Ahn, J. H.: The microRNA156-SQUAMOSA PROMOTER BINDING PROTEIN-LIKE3 Module Regulates Ambient Temperature-Responsive Flowering via FLOWERING LOCUS T in Arabidopsis. Plant Physiology 159 (1), pp. 461 - 478 (2012)
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Kim, T.-H.; Kunz, H.-H.; Bhattacharjee, S.; Hauser, F.; Park, J.; Engineer, C.; Liu, A.; Ha, T.; Parker, J. E.; Gassmann, W. et al.; Schroeder, J. I.: Natural Variation in Small Molecule–Induced TIR-NB-LRR Signaling Induces Root Growth Arrest via EDS1- and PAD4-Complexed R Protein VICTR in Arabidopsis. The Plant Cell (24), tpc.112.107235 , pp. 5177 - 5192 (2012)
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Klasen, J. R.; Piepho, H.-P.; Stich, B.: QTL detection power of multi-parent RIL populations of Arabidopsis thaliana. Heredity 108, pp. 626 - 632 (2012)
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Kleemann, J.; Rincon Rivera, L. J.; Takahara, H.; Neumann, U.; Ver Loren van Themaat, E.; van der Does, H. C.; Hacquard, S.; Stueber, K.; Will, I.; Schmalenbach, W. et al.; Schmelzer, E.; O'Connell, R. J.: Sequential Delivery of Host-Induced Virulence Effectors by Appressoria and Intracellular Hyphae of the Phytopathogen Colletotrichum higginsianum. PLoS Pathogens 8 (4), e1002643 (2012)
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Kleppe, L.; Edvardsen, R. B.; Kuhl, H.; Malde, K.; Furmanek, T.; Drivenes, O.; Reinhardt, R.; Taranger, G. L.; Wargelius, A.: Maternal 3 ' UTRs: from egg to onset of zygotic transcription in Atlantic cod. BMC Genomics 13, 443 (2012)
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Koerber, N.; Wittkop, B.; Bus, A.; Friedt, W.; Snowdon, R. J.; Stich, B.: Seedling development in a Brassica napus diversity set and its relationship to agronomic performance. Theoretical and Applied Genetics 125 (6), pp. 1275 - 1287 (2012)
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Kohlen, W.; Charnikhova, T.; Lammers, M.; Pollina, T.; Toth, P.; Haider, I.; Pozo, M. J.; de Maagd, R. A.; Ruyter-Spira, C.; Bouwmeester, H. J. et al.; Lopez-Raez, J. A.: The tomato CAROTENOID CLEAVAGE DIOXYGENASE8 (SlCCD8) regulates rhizosphere signaling, plant architecture and affects reproductive development through strigolactone biosynthesis. New Phytologist 196 (2), pp. 535 - 547 (2012)
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Kombrink, E.: Chemical and genetic exploration of jasmonate biosynthesis and signaling paths. Planta 236 (5), pp. 1351 - 1366 (2012)
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Koncz, C.; de Jong, F.; Fernandez Villacorta, N.; Szakonyi, D.; Koncz, Z.: The spliceosome-activating complex: molecular mechanisms underlying the function of a pleiotropic regulator. Frontiers in Plant Physiology, doi: 10.3389/fpls.2012.00009 (2012)
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Koornneef, M.: My favourite flowering image. Journal of Experimental Botany 64, doi: 10.1093/jxb/err413, pp. 5801 - 5803 (2012)
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Körber, N.; Wittkopp, B.; Bus, A.; Snowdon, R.; Friedt, W.; Stich, B.: Seedling development in a Brassica napus diversity set and its relation to agronomic performance. Theoretical and Applied Genetics 125, pp. 1275 - 1287 (2012)
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Koskela, E. A.; Mouhu, K.; Albani, M.; Kurokura, T.; Rantanen, M.; Sargent, D.; Battey, N. H.; Coupland, G.; Elomaa, P.; Hytonen, T.: Mutation in TERMINAL FLOWER1 Reverses the Photoperiodic Requirement for Flowering in the Wild Strawberry Fragaria vesca. Plant Physiology 159 (3), pp. 1043 - 1054 (2012)
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Krapp, F.; Woehrmann, T.; de Barros Pinange, D. S.; Benko-Iseppon, A. M.; Huettel, B.; Weising, K.: A set of plastid microsatellite loci for the genus Dyckia (Bromeliaceae) derived from 454 pyrosequencing. American Journal of Botany 99 (12), pp. E470 - E473 (2012)
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Kroenlein, H.; Schwartz, S.; Reinhardt, R.; Rieder, H.; Molkentin, M.; Goekbuget, N.; Hoelzer, D.; Thiel, E.; Burmeister, T.: Molecular analysis of the t(2;8)/MYC-IGK translocation in high-grade lymphoma/leukemia by long-distance inverse PCR. GENES CHROMOSOMES & CANCER 51 (3), pp. 290 - 299 (2012)
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Kronholm, I.; Xavier Pico, F.; Alonso-Blanco, C.; Goudet, J.; de Meaux, J.: GENETIC BASIS OF ADAPTATION IN ARABIDOPSIS THALIANA: LOCAL ADAPTATION AT THE SEED DORMANCY QTL DOG1. Evolution 66 (7), pp. 2287 - 2302 (2012)
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Kwaaitaal, M.; Maintz, J.; Cavdar, M.; Panstruga, R.: On the ligand binding profile and desensitization of plant ionotropic glutamate receptor (iGluR)-like channels functioning in MAMP-triggered Ca2+ influx. Plant Signaling & Behavior 7, pp. 1373 - 1377 (2012)
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Kwantes, M.; Liebsch, D.; Verelst, W.: How MIKC* MADS-Box Genes Originated and Evidence for Their Conserved Function Throughout the Evolution of Vascular Plant Gametophytes. Molecular Biology and Evolution 29 (1), pp. 293 - 302 (2012)
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Lahme, S.; Eberlein, C.; Jarling, R.; Kube, M.; Boll, M.; Wilkes, H.; Reinhardt, R.; Rabus, R.: Anaerobic degradation of 4-methylbenzoate via a specific 4-methylbenzoyl-CoA pathway. Environmental Microbiology 14 (5), pp. 1118 - 1132 (2012)
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Lebeis, S. L.; Rott, M.; Dangl, J. L.; Schulze-Lefert, P.: Culturing a plant microbiome community at the cross-Rhodes. New Phytologist 196 (2), pp. 341 - 344 (2012)
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Lemak, S.; Tchigvintsev, A.; Petit, P.; Flick, R.; Singer, A. U.; Brown, G.; Evdokimova, E.; Egorova, O.; Gonzalez, C. F.; Chernikova, T. N. et al.; Yakimov, M. M.; Kube, M.; Reinhardt, R.; Golyshin, P. N.; Savchenko, A.; Yakunin, A. F.: Structure and activity of the cold-active and anion-activated carboxyl esterase OLEI01171 from the oil-degrading marine bacterium Oleispira antarctica. Biochemical Journal 445, pp. 193 - 203 (2012)
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Lempe, J.; Lachowiec , J.; Sullivan , A. M.; Queitsch , C.: Molecular mechanisms of robustness in plants. Current Opinion in Plant Biology (16), doi.org/10.1016/j.pbi.2012.12.002, pp. 62 - 69 (2012)
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Lenger, J.; Kaschani, F.; Lenz, T.; Dalhoff, C.; Villamor, J. G.; Villa; Koester, H.; Sewald, N.; Van der Hoorn, R. A. L.: Labeling and enrichment of Arabidopsis thaliana matrix metalloproteases using an active-site directed, marimastat-based photoreactive probe. Bioorganic & Medicinal Chemistry 20 (2), pp. 592 - 596 (2012)
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Lenk, S.; Moraru, C.; Hahnke, S.; Arnds, J.; Richter, M.; Kube, M.; Reinhardt, R.; Brinkhoff, T.; Harder, J.; Amann, R. et al.; Mussmann, M.: Roseobacter clade bacteria are abundant in coastal sediments and encode a novel combination of sulfur oxidation genes. ISME JOURNAL 6 (12), pp. 2178 - 2187 (2012)
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Louis, J.; Gobbato, E.; Mondal, H. A.; Feys, B. J.; Parker, J. E.; Shah, J.: Discrimination of Arabidopsis PAD4 Activities in Defense against Green Peach Aphid and Pathogens. Plant Physiology 158 (4), pp. 1860 - 1872 (2012)
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Lozano-Torres, J. L.; Wilbers, R. H. P.; Gawronski, P.; Boshoven, J. C.; Finkers-Tomczak, A.; Cordewener, J. H. G.; America, A. H. P.; Overmars, H. A.; Van 't Klooster, J. W.; Baranowski, L. et al.; Sobczak, M.; Ilyas, M.; Van der Hoorn, R. A. L.; Schots, A.; de Wit, P. J. G. M.; Bakker, J.; Goverse, A.; Smant, G.: Dual disease resistance mediated by the immune receptor Cf-2 in tomato requires a common virulence target of a fungus and a nematode. Proceedings of the National Academy of Sciences of the United States of America 109 (25), pp. 10119 - 10124 (2012)
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Lu, Y.-J.; Schornack, S.; Spallek, T.; Geldner, N.; Chory, J.; Schellmann, S.; Schumacher, K.; Kamoun, S.; Robatzek, S.: Patterns of plant subcellular responses to successful oomycete infections reveal differences in host cell reprogramming and endocytic trafficking. Cellular Microbiology 14 (5), pp. 682 - 697 (2012)
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Madhugiri, R.; Pessi, G.; Voss, B.; Hahn, J.; Sharma, C. M.; Reinhardt, R.; Vogel, J.; Hess, W. R.; Fischer, H.-M.; Evguenieva-Hackenberg, E.: Small RNAs of the Bradyrhizobium/Rhodopseudomonas lineage and their analysis. RNA BIOLOGY 9 (1), pp. 47 - 58 (2012)
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Maekawa, T.; Kracher, B.; Vernaldi, S.; Ver Loren van Themaat, E.; Schulze-Lefert, P.: Conservation of NLR-triggered immunity across plant lineages. Proceedings of the National Academy of Sciences of the United States of America 109 (49), pp. 20119 - 20123 (2012)
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March, T. J.; Richter, D.; Colby, T.; Harzen, A.; Schmidt, J.; Pillen, K.: Identification of proteins associated with malting quality in a subset of wild barley introgression lines. Proteomics 12 (18), pp. 2843 - 2851 (2012)
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Nakabayashi, K.; Bartsch, M.; Jong, X.; Miatton, E.; Pellengahr, S.; Yano, R.; Seo, M.; Soppe, W. J. J.: The Time Required for Dormancy Release in Arabidopsis Is Determined by DELAY OF GERMINATION1 Protein Levels in Freshly Harvested Seeds. PLANT CELL 24 (7), pp. 2826 - 2838 (2012)
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Nickel, S.; Kaschani, F.; Colby, T.; Van der Hoorn, R. A. L.; Kaiser, M.: A para-nitrophenol phosphonate probe labels distinct serine hydrolases of Arabidopsis. Bioorganic & Medicinal Chemistry 20 (2), pp. 601 - 606 (2012)
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Niederberger, T.; Etzold, S.; Lidschreiber, M.; Maier, K. C.; Martin, D. E.; Froehlich, H.; Cramer, P.; Tresch, A.: MC EMiNEM Maps the Interaction Landscape of the Mediator. PLoS Computational Biology 8 (6), e1002568 (2012)
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O'Connell, R. J.; Thon, M. R.; Hacquard, S.; Amyotte, S. G.; Kleemann, J.; Torres, M. F.; Damm, U.; Buiate, E. A.; Epstein, L.; Alkan, N. et al.; Altmueller, J.; Alvarado-Balderrama, L.; Bauser, C. A.; Becker, C.; Birren, B. W.; Chen, Z.; Choi, J.; Crouch, J. A.; Duvick, J. P.; Farman, M. A.; Gan, P.; Heiman, D.; Henrissat, B.; Howard, R. J.; Kabbage, M.; Koch, C.; Kracher, B.; Kubo, Y.; Law, A. D.; Lebrun, M.-H.; Lee, Y.-H.; Miyara, I.; Moore, N.; Neumann, U.; Nordstroem, K.; Panaccione, D. G.; Panstruga, R.; Place, M.; Proctor, R. H.; Prusky, D.; Rech, G.; Reinhardt, R.; Rollins, J. A.; Rounsley, S.; Schardl, C. L.; Schwartz, D. C.; Shenoy, N.; Shirasu, K.; Sikhakolli, U. R.; Stueber, K.; Sukno, S. A.; Sweigard, J. A.; Takano, Y.; Takahara, H.; Trail, F.; van der Does, H. C.; Voll, L. M.; Will, I.; Young, S.; Zeng, Q.; Zhang, J.; Zhou, S.; Dickman, M. B.; Schulze-Lefert, P.; Ver Loren van Themaat, E.; Ma, L.-J.; Vaillancourt, L. J.: Lifestyle transitions in plant pathogenic Colletotrichum fungi deciphered by genome and transcriptome analyses. Nature Genetics 44 (9), pp. 1060 - + (2012)
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Olbrich, H.; Schmidts, M.; Werner, C.; Onoufriadis, A.; Loges, N. T.; Raidt, J.; Banki, N. F.; Shoemark, A.; Burgoyne, T.; Al Turki, S. et al.; Hurles, M. E.; Koehler, G.; Schroeder, J.; Nuernberg, G.; Nuernberg, P.; Chung, E. M. K.; Reinhardt, R.; Marthin, J. K.; Nielsen, K. G.; Mitchison, H. M.: Recessive HYDIN Mutations Cause Primary Ciliary Dyskinesia without Randomization of Left-Right Body Asymmetry. American Journal of Human Genetics 91 (4), pp. 672 - 684 (2012)
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Ottmann, C.; Van der Hoorn, R. A. L.; Kaiser, M.: The impact of plant-pathogen studies on medicinal drug discovery. Chemical Society Reviews 41 (8), pp. 3168 - 3178 (2012)
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Panizzi, J. R.; Becker-Heck, A.; Castleman, V. H.; Al-Mutairi, D. A.; Liu, Y.; Loges, N. T.; Pathak, N.; Austin-Tse, C.; Sheridan, E.; Schmidts, M. et al.; Olbrich, H.; Werner, C.; Haeffner, K.; Hellman, N.; Chodhari, R.; Gupta, A.; Kramer-Zucker, A.; Olale, F.; Burdine, R. D.; Schier, A. F.; O'Callaghan, C.; Chung, E. M. K.; Reinhardt, R.; Mitchison, H. M.; King, S. M.; Omran, H.; Drummond, I. A.: CCDC103 mutations cause primary ciliary dyskinesia by disrupting assembly of ciliary dynein arms. Nature Genetics 44 (6), pp. 714 - U148 (2012)
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Pecinka, A.; Fang, W.; Rehmsmeier, M.; Levy, A. A.; Mittelsten Scheid, O.: Polyploidization increases meiotic recombination frequency in Arabidopsis (vol 10, 2012). BMC Biology 10, 33 (2012)
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Pecinka, A.; Levy, A.; Mittelsten Scheid, O.: Answer to Wang and Luo, "Polyploidization increases meiotic recombination frequency in Arabidopsis: a close look at statistical modelling and data analysis". BMC Biology 10, 33 (2012)
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Pecinka, A.; Mittelsten Scheid, O.: Stress-Induced Chromatin Changes: A Critical View on Their Heritability. Plant and Cell Physiology 53 (5), pp. 801 - 808 (2012)
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Pedersen, C.; Ver Loren van Themaat, E.; McGuffin, L. J.; Abbott, J. C.; Burgis, T. A.; Barton, G.; Bindschedler, L. V.; Lu, X.; Maekawa, T.; Weßling, R. et al.; Cramer, R.; Thordal-Christensen, H.; Panstruga, R.; Spanu, P. D.: Structure and evolution of barley powdery mildew effector candidates. BMC Genomics (13), 694 (2012)
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Petersen, J.; Eriksson, S.; Harryson, P.; Pierog, S.; Colby, T.; Bartels, D.; Roehrig, H.: The lysine-rich motif of intrinsically disordered stress protein CDeT11-24 from Craterostigma plantagineum is responsible for phosphatidic acid binding and protection of enzymes from damaging effects caused by desiccation. Journal of Experimental Botany 63 (13), pp. 4919 - 4929 (2012)
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Porri, A.; Torti, S.; Romera-Branchat, M.; Coupland, G.: Spatially distinct regulatory roles for gibberellins in the promotion of flowering of Arabidopsis under long photoperiods. Development 139 (12), pp. 2198 - 2209 (2012)
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Richau, K. H.; Kaschani, F.; Verdoes, M.; Pansuriya, T. C.; Niessen, S.; Stueber, K.; Colby, T.; Overkleeft, H. S.; Bogyo, M.; Van der Hoorn, R. A. L.: Subclassification and Biochemical Analysis of Plant Papain-Like Cysteine Proteases Displays Subfamily-Specific Characteristics. Plant Physiology 158 (4), pp. 1583 - 1599 (2012)
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Richter, S.; Mueller, L. M.; Stierhof, Y.-D.; Mayer, U.; Takada, N.; Kost, B.; Vieten, A.; Geldner, N.; Koncz, C.; Juergens, G.: Polarized cell growth in Arabidopsis requires endosomal recycling mediated by GBF1-related ARF exchange factors. NATURE CELL BIOLOGY 14 (1), pp. 80 - U130 (2012)
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Rieder, R.; Reinhardt, R.; Sharma, C. M.; Vogel, J.: Experimental tools to identify RNA-protein interactions in Helicobacter pylori. RNA Biology 9 (4), pp. 520 - 531 (2012)
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Rolicka, A.; Bucior, E.; Sarnowska, E.; Gratkowska, D.; Archacki, R.; Davis, S. J.; Koncz, C.; Sarnowski, T. J.; Jerzmanowski, A.: ATSWI3C subunit of the Arabidopsis SWI/SNF chromatin remodeling complex is involved in the GA response pathway. FEBS JOURNAL 279, p. 84 - 84 (2012)
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