Wissenschaftliche Publikationen ab 2002

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Liu, J.; Wang, J.; Yao, X.; Zhang, Y.; Li, J. Q.; Wang, X.; Xu, Z.; Chen, W.: Characterization and fine mapping of thermo-sensitive chlorophyll deficit mutant1 in rice (Oryza sativa L.). Breeding Science 65 (2), S. 161 - 169 (2015)

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Liu, S.; Kracher, B.; Ziegler, J.; Birkenbihl, R.; Somssich, I. E.: Negative regulation of ABA signaling by WRKY33 is critical for Arabidopsis immunity towards Botrytis cinerea 2100. eLife 4, S. e07295 - e07295 (2015)

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Lu, H.; Chandrasekar, B.; Oeljeklaus, J.; Misas-Villamil, J.; Wang, Z.; Shindo, T.; Bogyo, M.; Kaiser, M.; Van der Hoorn, R. A. L.: Subfamily-Specific Fluorescent Probes for Cysteine Proteases Display Dynamic Protease Activities during Seed Germination. Plant Physiology 168 (4), S. 1462 - U1636 (2015)

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Lu, X.; Dittgen, J.; Pislewska-Bednarek, M.; Molina, A.; Schneider, B.; Svatos, A.; Doubsky, J.; Schneeberger, K.; Weigel, D.; Bednarek, P. et al.; Schulze-Lefert, P.: Mutant allele-specific uncoupling of PEN3 functions reveals engagement of the ABC transporter in distinct tryptophan metabolic pathways. Plant Physiology 168, S. 814 - 827 (2015)

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Makandar, R.; Nalam, V. J.; Chowdhury, Z.; Sarowar, S.; Klossner, G.; Lee, H.; Burdan, D.; Trick, H. N.; Gobbato, E.; Parker, J. E. et al.; Shah, J.: The Combined Action of ENHANCED DISEASE SUSCEPTIBILITY1, PHYTOALEXIN DEFICIENT4, and SENESCENCE-ASSOCIATED101 Promotes Salicylic Acid-Mediated Defenses to Limit Fusarium graminearum Infection in Arabidopsis thaliana. Molecular Plant-Microbe Interactions 28 (8), S. 943 - 953 (2015)

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Mateos, J. L.; Madrigal, P.; Tsuda, K.; Rawat, V.; Rawat, V.; Richter, R.; Romera Branchat, M.; Fornara, F.; Schneeberger, K.; Krajewski, P. et al.; Coupland, G.: Combinatorial activities of SHORT VEGETATIVE PHASE and FLOWERING LOCUS C define distinct modes of flowering regulation in Arabidopsis. Genome Biology 16, 31 (2015)

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Mau, M.; Lovell, J. T.; Corral, J. M.; Kiefer, C.; Koch, M. A.; Aliyu, O. M.; Sharbel, T. F.: Hybrid apomicts trapped in the ecological niches of their sexual ancestors. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 112 (18), S. E2357 - E2365 (2015)

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McMullan, M.; Gardiner, A.; Bailey, K.; Kemen, E.; Ward, B. J.; Cevik, V.; Robert-Seilaniantz, A.; Schultz-Larsen, T.; Balmuth, A.; Holub, E. et al.; van Oosterhout, C.; Jones, J. D. G.: Evidence for suppression of immunity as a driver for genomic introgressions and host range expansion in races of Albugo candida, a generalist parasite. eLife 4, e04550 (2015)

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Mentink, R.; Tsiantis, M.: From limbs to leaves: common themes in evolutionary diversification of organ form. Frontiers in genetics 6, S. 284 - 284 (2015)

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Monniaux, M.; Pieper, B.; Hay, A.: Stochastic variation in Cardamine hirsuta petal number. Annals of Botany, 10.1093/aob/mcv131 (2015)

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Montenegro-Johnson, T. D.; Stamm, P.; Strauss, S.; Topham, A. T.; Tsagris, M.; Wood, A. T. A.; Smith, R. S.; Bassel, G. W.: Digital Single-Cell Analysis of Plant Organ Development Using 3DCellAtlas. Plant Cell 27 (4), S. 1018 - 1033 (2015)

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Muktar, M. S.; Lubeck, J.; Strahwald, J.; Gebhardt, C.: Selection and validation of potato candidate genes for maturity corrected resistance to Phytophthora infestans based on differential expression combined with SNP association and linkage mapping. Frontiers in Genetics 6, S. 294 - 294 (2015)

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Nakabayashi, K.; Obeng-Hinneh, E.; Bartsch, M.; Ding, J.; Soppe, W. J.: Seed dormancy in Arabidopsis requires self-binding ability of DOG1 protein and the presence of multiple isoforms generated by alternative splicing. PLoS Genetics, e1005737 (2015)

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Née, G.; Obeng-Hinneh, E.; Sarvari, P.; Nakabayashi, K.; Soppe, W. J. J.: Secondary dormancy in Brassica napus is correlated with enhanced BnaDOG1 transcript levels. Seed Science Research 25 (SI 2), S. 221 - 229 (2015)

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Niederberger, T.; Failmezger, H.; Uskat, D.; Poron, D.; Glauche, I.; Scherf, N.; Roeder, I.; Schroeder, T.; Tresch, A.: Factor graph analysis of live cell-imaging data reveals mechanisms of cell fate decisions. Bioinformatics (Oxford, England) 31 (11), S. 1816 - 23 (2015)

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Nikolov, L. A.; Tsiantis, M.: Interspecies Gene Transfer as a Method for Understanding the Genetic Basis for Evolutionary Change: Progress, Pitfalls, and Prospects. Frontiers in Plant Science 6, 1135 (2015)

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Obidiegwu, J. E.; Sanetomo, R.; Flath, K.; Tacke, E.; Hofferbert, H.-R.; Hofmann, A.; Walkemeier, B.; Gebhardt, C.: Genomic architecture of potato resistance to Synchytrium endobioticum disentangled using SSR markers and the 8.3k SolCAP SNP genotyping array. BMC GENETICS 16, 38 (2015)

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Ohkama-Ohtsu, N.; Ichida, S.; Yamaya, H.; Ohwada, T.; Itakura, M.; Hara, Y.; Mitsui, H.; Kaneko, T.; Tabata, S.; Tejima, K. et al.; Saeki, K.; Omori, H.; Hayashi, M.; Maekawa, T.; Murooka, Y.; Tajima, S.; Simomura, K.; Nomura, M.; Uchiumi, T.; Suzuki, A.; Shimoda, Y.; Abe, M.; Minamisawa, K.; Arima, Y.; Yokoyama, T.: Peribacteroid solution of soybean root nodules partly induces genomic loci for differentiation into bacteroids of free-living Bradyrhizobium japonicum cells. SI 61 (3), S. 461 - 470 (2015)

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Ordonez-Herrera, N.; Fackendahl, P.; Yu, X.; Schaefer, S.; Koncz, C.; Hoecker, U.: A cop1 spa Mutant Deficient in COP1 and SPA Proteins Reveals Partial Co-Action of COP1 and SPA during Arabidopsis Post-Embryonic Development and Photomorphogenesis. Molecular Plant 8 (3), S. 479 - 481 (2015)

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Papdi, C.; Perez-Salamo, I.; Joseph, M. P.; Giuntoli, B.; Boegre, L.; Koncz, C.; Szabados, L.: The low oxygen, oxidative and osmotic stress responses synergistically act through the ethylene response factor VII genes RAP2.12, RAP2.2 and RAP2.3. The Plant Journal 82 (5), S. 772 - 784 (2015)

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Piednoel, M.; Sousa, A.; Renner, S. S.: Transposable elements in a clade of three tetraploids and a diploid relative, focusing on Gypsy amplification. MOBILE DNA 6, 5 (2015)

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Piofczyk, T. P.; Jeena, G.; Pecinka, A.: Arabidopsis thaliana natural variation reveals connections between UV radiation stress and plant pathogen-like defense responses. Plant Physiology and Biochemistry 93, S. 34 - 43 (2015)

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Raschke, A.; Ibanez, C.; Ullrich, K. K.; Anwer, M. U.; Becker, S.; Gloeckner, A.; Trenner, J.; Denk, K.; Saal, B.; Sun, X. et al.; Ni, M.; Davis, S. J.; Delker, C.; Quint, M.: Natural variants of ELF3 affect thermomorphogenesis by transcriptionally modulating PIF4-dependent auxin response genes. BMC Plant Biology 15, 197 (2015)

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Rast-Somssich, M.; Broholm, S.; Jenkins, H.; Canales, C.; Vlad, D.; Kwantes, M.; Bilsborough, G.; Dello Ioio, R.; Ewing, R. M.; Laufs, P. et al.; Huijser, P.; Ohno, C.; Heisler, M. G.; Hay, A.; Tsiantis, M.: Alternate wiring of a KNOXI genetic network underlies differences in leaf development of A. thaliana and C. hirsuta. Genes and Development 29 (23), S. 2391 - 2404 (2015)

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Rawat, V.; Abdelsamad, A.; Pietzenuk, B.; Seymour, D. K.; Koenig, D.; Weigel, D.; Pecinka, A.; Schneeberger, K.: Improving the Annotation of Arabidopsis lyrata Using RNA-Seq Data. PLOS ONE 10 (9), e0137391 (2015)

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Rossmann, S.; Kohlen, W.; Hasson, A.; Theres, K.: Lateral suppressor and Goblet act in hierarchical order to regulate ectopic meristem formation at the base of tomato leaflets. The Plant Journal 81 (6), S. 837 - 848 (2015)

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Rousselle, Y.; Jones, E.; Charcosset, A.; Moreau, P.; Robbins, K.; Stich, B.; Knaak, C.; Flament, P.; Karaman, Z.; Martinant, J.-P. et al.; Fourneau, M.; Taillardat, A.; Romestant, M.; Tabel, C.; Bertran, J.; Ranc, N.; Lespinasse, D.; Blanchard, P.; Kahler, A.; Chen, J.; Kahler, J.; Dobrin, S.; Warner, T.; Ferris, R.; Smith, S.: Study on Essential Derivation in Maize: III. Selection and Evaluation of a Panel of Single Nucleotide Polymorphism Loci for Use in European and North American Germplasm. Crop Science 55 (3), S. 1170 - 1180 (2015)

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Rowan, B. A.; Patel, V.; Weigel, D.; Schneeberger, K.: Rapid and Inexpensive Whole-Genome Genotyping-by-Sequencing for Crossover Localization and Fine-Scale Genetic Mapping. G3-GENES GENOMES GENETICS 5 (3), S. 385 - 398 (2015)

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Sacharowski, S.; Gratkowska, D. M.; Sarnowska, E. A.; Kondrak, P.; Jancewicz, I.; Porri, A.; Bucior, E.; Rolicka, A. T.; Franzen, R.; Kowalczyk, J. et al.; Pawlikowska, K.; Huettel, B.; Torti, S.; Schmelzer, E.; Coupland, G.; Jerzmanowski, A.; Koncz, C.; Sarnowski, T. J.: SWP73 Subunits of Arabidopsis SWI/SNF Chromatin Remodeling Complexes Play Distinct Roles in Leaf and Flower Development. PLANT CELL 27 (7), S. 1889 - 1906 (2015)

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Sanetomo, R.; Gebhardt, C.: Cytoplasmic genome types of European potatoes and their effects on complex agronomic traits. BMC Plant Biology 15, 162 (2015)

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Sanz-Luque, E.; Ocana-Calahorro, F.; de Montaigu, A.; Chamizo-Ampudia, A.; Llamas, A.; Galvan, A.; Fernandez, E.: THB1, a truncated hemoglobin, modulates nitric oxide levels and nitrate reductase activity. The Plant Journal 81 (3), S. 467 - 479 (2015)

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Sarid-Krebs, L.; Panigrahi, K. C. S.; Fornara, F.; Takahashi, Y.; Hayama, R.; Jang, S.; Tilmes, V.; Valverde, F.; Coupland, G.: Phosphorylation of CONSTANS and its COP1-dependent degradation during photoperiodic flowering of Arabidopsis. The Plant journal: for cell and molecular biology 84 (3), S. 451 - 63 (2015)

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Serrano, M.; Kombrink, E.; Meesters, C.: Considerations for designing chemical screening strategies in plant biology. Frontiers in Plant Science 6, 131 (2015)

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Sharma, R.; Xia, X.; Cano, L. M.; Evangelisti, E.; Kemen, E.; Judelson, H.; Oome, S.; Sambles, C.; van den Hoogen, D. J.; Kitner, M. et al.; Klein, J.; Meijer, H. J. G.; Spring, O.; Win, J.; Zipper, R.; Bode, H. B.; Govers, F.; Kamoun, S.; Schornack, S.; Studholme, D. J.; Van den Ackerveken, G.; Thines, M.: Genome analyses of the sunflower pathogen Plasmopara halstedii provide insights into effector evolution in downy mildews and Phytophthora. BMC Genomics 16, 741 (2015)

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Simon, S.; Rühl, M.; de Montaigu, A.; Woetzel, S.; Coupland, G.: Evolution of CONSTANS Regulation and Function after Gene Duplication Produced a Photoperiodic Flowering Switch in the Brassicaceae. Molecular Biology and Evolution, 10.1093/molbev/msv110 (2015)

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Sreekanta, S.; Bethke, G.; Hatsugai, N.; Tsuda, K.; Thao, A.; Wang, L.; Katagiri, F.; Glazebrook, J.: The Receptor-Like Cytoplasmic Kinase PCRK1 Contributes to Pattern-Triggered Immunity against Pseudomonas syringae in Arabidopsis thaliana. New Phytologist 207 (1), S. 78 - 90 (2015)

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Sun, H.-Q.; Schneeberger, K.: SHOREmap v3.0: fast and accurate identification of causal mutations from forward genetic screens. Methods in molecular biology (Clifton, N.J.) 1284, S. 381 - 95 (2015)

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Tauriello, G.; Meyer, H. M.; Smith, R. S.; Koumoutsakos, P.; Roeder, A. H. K.: Variability and Constancy in Cellular Growth of Arabidopsis Sepals. Plant Physiology 169 (4), S. 2342 - 2358 (2015)

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Ting, H.-M.; Delatte, T. L.; Kolkman, P.; Misas-Villamil, J.; Van der Hoorn, R. A. L.; Bouwmeester, H. J.; van der Krol, A. R.: SNARE-RNAi Results in Higher Terpene Emission from Ectopically Expressed Caryophyllene Synthase in Nicotiana benthamiana. Molecular Plant 8 (3), S. 454 - 466 (2015)

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Torang, P.; Wunder, J.; Obeso, J. R.; Herzog, M.; Coupland, G.; Agren, J.: Large-scale adaptive differentiation in the alpine perennial herb Arabis alpina. New Phytologist 206 (1), S. 459 - 470 (2015)

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Tsuda, K.; Somssich, I. E.: Transcriptional networks in plant immunity. New Phytologist 206 (3), S. 932 - 947 (2015)

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Vu, G. T. H.; Schmutzer, T.; Bull, F.; Cao, H. X.; Fuchs, J.; Tran, T. D.; Jovtchev, G.; Pistrick, K.; Stein, N.; Pecinka, A. et al.; Neumann, P.; Novak, P.; Macas, J.; Dear, P.H.; Blattner, F. R.; Scholz, U.; Schubert, I.: Comparative Genome Analysis Reveals Divergent Genome Size Evolution in a Carnivorous Plant Genus. Plant Genome 8 (3), S. 1 - 14 (2015)

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Wagner, S.; Behera, S.; De Bortoli, S.; Logan, D. C.; Fuchs, P.; Carraretto, L.; Teardo, E.; Cendron, L.; Nietzel, T.; Fuessl, M. et al.; Doccula, F. G.; Navazio, L.; Fricker, M. D.; Van Aken, O.; Finkemeier, I.; Meyer, A. J.; Szabo, I.; Costa, A.; Schwarzlaender, M.: The EF-Hand Ca2+ Binding Protein MICU Choreographs Mitochondrial Ca2+ Dynamics in Arabidopsis. Plant and Cell Physiology 27 (11), S. 3190 - 3212 (2015)

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Weber, A.; Braybrook, S.; Huflejt, M.; Mosca, G.; Routier-Kierzkowska, A.-L.; Smith, R. S.: Measuring the mechanical properties of plant cells by combining micro-indentation with osmotic treatments. Journal of Experimental Botany 66 (11), S. 3229 - 3241 (2015)

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Wendeler, E.; Zobell, O.; Chrost, B.; Reiss, B.: Recombination products suggest the frequent occurrence of aberrant gene replacement in the moss Physcomitrellapatens. The Plant Journal 81 (4), S. 548 - 58 (2015)

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Willing, E.-M.; Rawat, V.; Mandakova, T.; Maumus, F.; James, G. V.; Nordstroem, K.; Becker, C.; Warthmann, N.; Chica, C.; Szarzynska, B. et al.; Zytnicki, M.; Albani, M.; Kiefer, C.; Bergonzi, S.; Castaings, L.; Mateos, J. L.; Berns, M. C.; Bujdoso, N.; Piofczyk, T. P.; de Lorenzo, L.; Barrero-Sicilia, C.; Mateos, I.; Piednoel, M.; Hagmann, J.; Chen-Min-Tao, R.; Iglesias-Fernandez, R.; Schuster, S. C.; Alonso-Blanco, C.; Roudier, F.; Carbonero, P.; Paz-Ares, J.; Davis, S. J.; Pecinka, A.; Quesneville, H.; Colot, V.; Lysak, M. A.; Weigel, D.; Coupland, G.; Schneeberger, K.: Genome expansion of Arabis alpina linked with retrotransposition and reduced symmetric DNA methylation. Nature Plants 1 (2), UNSP 14023, S. 1 - 7 (2015)

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Xue, L.; Cui, H.; Buer, B.; Vijayakumar, V.; Delaux, P.-M.; Junkermann, S.; Bucher, M.: Network of GRAS Transcription Factors Involved in the Control of Arbuscule Development in Lotus japonicus. Plant physiology 167 (3), S. 854 - 71 (2015)

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Zamioudis, C.; Korteland, J.; Van Pelt, J. A.; van Hamersveld, M.; Dombrowski, N.; Bai, Y.; Hanson, J.; Van Verk, M. C.; Ling, H.-Q.; Schulze-Lefert, P. et al.; Pieterse, C. M. J.: Rhizobacterial volatiles and photosynthesis-related signals coordinate MYB72 expression in Arabidopsis roots during onset of induced systemic resistance and iron-deficiency responses. The Plant Journal 84 (2), S. 309 - 322 (2015)

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Abdelsamad, A.; Pecinka, A.: Pollen-Specific Activation of Arabidopsis Retrogenes Is Associated with Global Transcriptional Reprogramming. The Plant Cell 26 (8), S. 3299 - 3313 (2014)

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Akman, K.; Haaf, T.; Gravina, S.; Vijg, J.; Tresch, A.: Genome-wide quantitative analysis of DNA methylation from bisulfite sequencing data. Bioinformatics 30 (13), S. 1933 - 1934 (2014)

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