MPI für Pflanzenzüchtungsforschung

Publikationen von B. Huettel

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Zeitschriftenartikel (57)

2021

Zeitschriftenartikel

Aecyo, P.; Marques, A.; Huettel, B.; Silva, A.; Esposito, T.; Ribeiro, E.; Leal, I.R.; Gagnon, E.; Souza, G.; Pedrosa-Harand, A.: Plastome evolution in the Caesalpinia group (Leguminosae) and its application in phylogenomics and populations genetics. Planta 254 (2), 27 (2021)

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Costa, L.; Marques, A.; Buddenhagen, C.; Thomas, W. W.; Huettel, B.; Schubert, V.; Dodsworth, S.; Houben, A.; Souza, G.; Pedrosa-Harand, A.: Aiming off the target: recycling target capture sequencing reads for investigating repetitive DNA. Annals of Botany, mcab063 (2021)

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Graf, J. S.; Schorn, S.; Kitzinger, K.; Ahmerkamp, S.; Woehle, C.; Huettel, B.; Schubert, C. J.; Kuypers, M. M. M.; Milucka, J.: Anaerobic endosymbiont generates energy for ciliate host by denitrification. NATURE 591 (7850), S. 445 - 450 (2021)

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Mesny, F.; Miyauchi, S.; Thiergart, T.; Pickel, B.; Atanasova, L.; Karlsson, M.; Huettel, B.; Barry, K.W.; Haridas, S.; Chen, C. et al.; Bauer, D.; Andreopoulos, W.; Pangilinan, J.; LaButti, K.; Riley, R.; Lipzen, A.; Clum, A.; Drula, E.; Henrissat, B.; Kohler, A.; Grigoriev, I.V.; Martin, F.M.; Hacquard, S.: Genetic determinants of endophytism in the Arabidopsis root mycobiome. Nature Communications 12, 7227 (2021)

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Plesken, C.; Pattar, P.; Reiss, B.; Noor, Z. N.; Zhang, L.; Klug, K.; Huettel, B.; Hahn, M.: Genetic Diversity of Botrytis cinerea Revealed by Multilocus Sequencing, and Identification of B. cinerea Populations Showing Genetic Isolation and Distinct Host Adaptation. Frontiers in Plant Science 12, 663027 (2021)

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Schneider, C.; Woehle, C.; Greve, C.; D'Haese, C. A.; Wolf, M.; Hiller, M.; Janke, A.; Balint, M.; Huettel, B.: Two high-quality de novo genomes from single ethanol-preserved specimens of tiny metazoans (Collembola). GigaScience 10 (5), giab035, S. 1 - 12 (2021)

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2020

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Andrés Lalaguna, F.; Kinoshita, A.; Kalluri, N.; Fernandez, V.; Falavigna, V.; Cruz, T. M. D.; Jang, S.; Chiba, Y.; Seo, M.; Mettler-Altmann, T. et al.; Huettel, B.; Coupland, C.: The sugar transporter SWEET10 acts downstream of FLOWERING LOCUS T during floral transition of Arabidopsis thaliana. BMC Plant Biology 20 (1), 53 (2020)

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Campoy, J. A.; Sun, H.-Q.; Goel, M.; Jiao, W.-B.; Folz-Donahue, K.; Wang, N.; Rubio, M.; Liu, C.; Kukat, C.; Ruiz, D. et al.; Huettel, B.; Schneeberger, K.: Gamete binning: chromosome-level and haplotype-resolved genome assembly enabled by high-throughput single-cell sequencing of gamete genomes. Genome Biology and Evolution 21 (1), 306 (2020)

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Flegler, A.; Runzheimer, K.; Kombeitz, V.; Maenz, A. T.; Heidler von Heilborn, D.; Etzbach, L.; Schieber, A.; Hoelzl, G.; Huettel, B.; Woehle, C. et al.; Lipski, A.: Arthrobacter bussei sp. nov., a pink-coloured organism isolated from cheese made of cow's milk. International Journal of Systematic and Evolutionary Microbiology 70 (5), S. 3027 - 3036 (2020)

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Schneider, B.; Huettel, B.; Zuebert, C.; Kube, M.: Genetic variation, phylogenetic relationship and spatial distribution of 'Candidatus Phytoplasma ulmi' strains in Germany. Scientific Reports 10 (1), 21864 (2020)

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2019

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Dantas, L. G.; Alencar, L.; Huettel, B.; Pedrosa-Harand, A.: Development of ten microsatellite markers for Alibertia edulis (Rubiaceae), a Brazilian savanna tree species. Molecular Biology Reports 46 (4), S. 4593 - 4597 (2019)

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Lambrecht, S. J.; Kanesaki, Y.; Fuss, J.; Huettel, B.; Reinhardt, R.; Steglich, C.: Interplay and Targetome of the Two Conserved Cyanobacterial sRNAs Yfr1 and Yfr2 in Prochlorococcus MED4. Scientific Reports 9, 14331 (2019)

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Pucker, B.; Holtgraewe, D.; Stadermann, K. B.; Frey, K.; Huettel, B.; Reinhardt, R.; Weisshaar, B.: A chromosome-level sequence assembly reveals the structure of the Arabidopsis thaliana Nd-1 genome and its gene set. PLoS One 14 (5), e0216233 (2019)

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Zeitschriftenartikel

Seah, B. K. B.; Antony, C. P.; Huettel, B.; Zarzycki, J.; von Borzyskowski, L. S.; Erb, T. J.; Kouris, A.; Kleiner, M.; Liebeke, M.; Dubilier, N. et al.; Gruber-Vodicka, H. R.: Sulfur-Oxidizing Symbionts without Canonical Genes for Autotrophic CO2 Fixation. MBIO 10 (3), e01112-19 (2019)

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Zeitschriftenartikel

Sun, H.-Q.; Rowan, B. A.; Flood, P. J.; Brandt, R.; Fuss, J.; Hancock, A. M.; Michelmore, R. W.; Huettel, B.; Schneeberger, K.: Linked-read sequencing of gametes allows efficient genome-wide analysis of meiotic recombination. Nature Communications 10, 4310 (2019)

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2018

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Dijkhuizen, L. W.; Brouwer, P.; Bolhuis, H.; Reichart, G.-J.; Koppers, N.; Huettel, B.; Bolger, A.M.; Li, F.-W.; Cheng, S.; Liu, X. et al.; Wong, G. K.-S.; Pryer, K.; Weber, A.; Braeutigam, A.; Schluepmann, H.: Is there foul play in the leaf pocket? The metagenome of floating fern Azolla reveals endophytes that do not fix N-2 but may denitrify. NEW PHYTOLOGIST 217 (1), S. 453 - 466 (2018)

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Hagemann, M.; Gaertner, K.; Scharnagl, M.; Bolay, P.; Lott, S. C.; Fuß, J.; Huettel, B.; Reinhardt, R.; Klaehn, S.; Hess, W. R.: Identification of the DNA methyltransferases establishing the methylome of the cyanobacterium Synechocystis sp PCC 6803. DNA RESEARCH 25 (4), S. 343 - 352 (2018)

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Hou, J.; Shi, X.; Chen, C.; Islam, M. S.; Johnson, A. F.; Kanno, T.; Huettel, B.; Yen, M.-R.; Hsu, F.-M.; Ji, T. et al.; Chen, P.-Y.; Matzke, M.; Matzke, A. J. M.; Cheng, J.; Birchler, J. A.: Global impacts of chromosomal imbalance on gene expression in Arabidopsis and other taxa. Proceedings of the National Academy of Sciences of the United States of America 115 (48), S. E11321 - E11330 (2018)

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Kirioukhova, O.; Shah, J. N.; Larsen, D. S.; Tayyab, M.; Mueller, N. E.; Govind, G.; Baroux, C.; Federer, M.; Gheyselinck, J.; Barrell, P. J. et al.; Ma, H.; Sprunck, S.; Huettel, B.; Wallace, H.; Grossniklaus, U.; Johnston, A.J.: Aberrant imprinting may underlie evolution of parthenogenesis. Scientific Reports 8, 10626 (2018)

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Li, F.-W.; Brouwer, P.; Carretero-Paulet, L.; Cheng, S.; de Vries, J.; Delaux, P.-M.; Eily, A.; Koppers, N.; Kuo, L.-Y.; Li, Z. et al.; Simenc, M.; Small, I.; Wafula, E.; Angarita, S.; Barker, M. S.; Braeutigam, A.; dePamphilis, C.; Gould, S.; Hosmani, P. S.; Huang, Y.-M.; Huettel, B.; Kato, Y.; Liu, X.; Maere, S.; McDowell, R.; Mueller, L. A.; Nierop, K. G. J.; Rensing, S. A.; Robison, T.; Rothfels, C. J.; Sigel, E. M.; Song, Y.; Timilsena, P. R.; Van de Peer, Y.; Wang, H.; Wilhelmsson, P. K. I.; Wolf, P. G.; Xu, X.; Der, J. P.; Schluepmann, H.; Wong, G. K.-S.; Pryer, K. M.: Fern genomes elucidate land plant evolution and cyanobacterial symbioses. Nature Plants 4 (7), S. 460 - 472 (2018)

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Zeitschriftenartikel

Sun, H.-Q.; Rowan, B. A.; Flood, P. J.; Brandt, R.; Fuss, J.; Hancock, A. M.; Michelmore, R. W.; Huettel, B.; Schneeberger, K.: Linked-read sequencing of gametes allows efficient genome-wide analysis of meiotic recombination. bioRxiv, 484022 (2018)

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Zeitschriftenartikel

Wenzel, A.; Altmueller, J.; Ekici, A. B.; Popp, B.; Stueber, K.; Thiele, H.; Pannes, A.; Staubach, S.; Salido, E.; Nuernberg, P. et al.; Reinhardt, R.; Reis, A.; Rump, P.; Hanisch, F.-G.; Wolf, M. T. F.; Wiesener, M.; Huettel, B.; Beck, B. B.: Single molecule real time sequencing in ADTKD-MUC1 allows complete assembly of the VNTR and exact positioning of causative mutations. Scientific Reports 8, 4170 (2018)

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Zeitschriftenartikel

Zenk, F. L.; Firmer, C.; Woehrmann, T.; da Silva, L. V.; Weising, K.; Huettel, B.; Paggi, G. M.: Development of 15 nuclear microsatellite markers in Deuterocohnia (Pitcairnioideae; Bromeliaceae) using 454 pyrosequencing. APPLICATIONS IN PLANT SCIENCES 6 (4), e1147 (2018)

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2017

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Jiao, W.-B.; Garcia Accinelli, G.; Hartwig, B.; Kiefer, C.; Baker, D.; Severing, E.; Willing, E.-M.; Piednoel, M.; Woetzel, S.; Madrid-Herrero, E. et al.; Huettel, B.; Huemann, U.; Reinhardt, R.; Koch, M. A.; Swan, D.; Clavijo, B.; Coupland, G.; Schneeberger, K.: Improving and correcting the contiguity of long-read genome assemblies of three plant species using optical mapping and chromosome conformation capture data. Genome Research 27 (5), S. 778 - 786 (2017)

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Schiessl, S.; Huettel, B.; Kuehn, D.; Reinhardt, R.; Snowdon, R. J.: Targeted deep sequencing of flowering regulators in Brassica napus reveals extensive copy number variation. Scientific Data 4, 170013 (2017)

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Schiessl, S.; Huettel, B.; Kuehn, D.; Reinhardt, R.; Snowdon, R.: Post-polyploidisation morphotype diversification associates with gene copy number variation. Scientific Reports 7, 41845 (2017)

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Schiessl, S. V.; Huettel, B.; Kuehn, D.; Reinhardt, R.; Snowdon, R. J.: Flowering Time Gene Variation in Brassica Species Shows Evolutionary Principles. Frontiers in Plant Science 8, 1742 (2017)

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Seah, B. K. B.; Schwaha, T.; Volland, J.-M.; Huettel, B.; Dubilier, N.; Gruber-Vodicka, H. R.: Specificity in diversity: single origin of a widespread ciliate-bacteria symbiosis. PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES 284 (1858), 20170764 (2017)

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Wanderley, A. M.; Vasconcelos, S.; Huettel, B.; Machado, I. C.; Benko-Iseppon, A. M.: Development of 15 SSR polymorphic markers for the endangered Ameroglossum pernambucense Eb. Fischer, S. Vogel & A. V. Lopes (Scrophulariaceae), and cross-transferability in congeneric taxa. Brazilian Journal of Botany 40 (4), S. 1007 - 1011 (2017)

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2016

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Azevedo, H.; Azinheiro, S. G.; Munoz-Merida, A.; Castro, P. H.; Huettel, B.; Aarts, M. G. M.; Assuncao, A. G. L.: Transcriptomic profiling of Arabidopsis gene expression in response to varying micronutrient zinc supply. GENOMICS DATA 7, S. 256 - 258 (2016)

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Blättner, S.; Das, S.; Paprotka, K.; Eilers, U.; Krischke, M.; Kretschmer, D.; Remmele, C.W.; Dittrich, M.; Müller, T.; Schuelein-Voelk, C. et al.; Hertlein, T.; Huettel, B.; Reinhardt, R.; Ohlsen, K.; Rudel, T.; Fraunholz, M.J.: Staphylococcus aureus Exploits a Non-ribosomal Cyclic Dipeptide to Modulate Survival within Epithelial Cells and Phagocytes. PLoS Pathogens 12, e1005857 (2016)

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Zeitschriftenartikel

Cartolano, M.; Huettel, B.; Hartwig, B.; Reinhardt, R.; Schneeberger, K.: cDNA Library Enrichment of Full Length Transcripts for SMRT Long Read Sequencing. PLoS One 11 (6), e0157779 (2016)

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Forat, S.; Huettel, B.; Reinhardt, R.; Fimmers, R.; Haidl, G.; Denschlag, D.; Olek, K.: Methylation Markers for the Identification of Body Fluids and Tissues from Forensic Trace Evidence. PLoS One 11 (2), e0147973 (2016)

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Woehrmann, T.; Huettel, B.; Wagner, N.; Weising, K.: MICROSATELLITES FROM FOSTERELLA CHRISTOPHII (BROMELIACEAE) BY DE NOVO TRANSCRIPTOME SEQUENCING ON THE PACIFIC BIOSCIENCES RS PLATFORM. Applications in Plant Sciences 4 (1), 1500084 (2016)

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2015

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Bai, Y.; Mueller, D. B.; Srinivas, G.; Garrido Oter, R.; Potthoff, E.; Rott, M.; Dombrowski, N.; Muench, P. C.; Spaepen, S.; Remus-Emsermann, M. et al.; Huettel, B.; McHardy, A. C.; Vorholt, J. A.; Schulze-Lefert, P.: Functional overlap of the Arabidopsis leaf and root microbiota. Nature 528 (7582), S. 364 - 369 (2015)

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Fornara, F.; de Montaigu, A.; Sánchez Villarreal, A.; Takahashi, Y.; Ver Loren van Themaat, E.; Huettel, B.; Davis, S. J.; Coupland, G.: The GI-CDF module of Arabidopsis affects freezing tolerance and growth as well as flowering. The Plant Journal 81 (5), S. 695 - 706 (2015)

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Frey, F. P.; Urbany, C.; Huettel, B.; Reinhardt, R.; Stich, B.: Genome-wide expression profiling and phenotypic evaluation of European maize inbreds at seedling stage in response to heat stress. BMC Genomics 16, 123 (2015)

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Sacharowski, S.; Gratkowska, D. M.; Sarnowska, E. A.; Kondrak, P.; Jancewicz, I.; Porri, A.; Bucior, E.; Rolicka, A. T.; Franzen, R.; Kowalczyk, J. et al.; Pawlikowska, K.; Huettel, B.; Torti, S.; Schmelzer, E.; Coupland, G.; Jerzmanowski, A.; Koncz, C.; Sarnowski, T. J.: SWP73 Subunits of Arabidopsis SWI/SNF Chromatin Remodeling Complexes Play Distinct Roles in Leaf and Flower Development. PLANT CELL 27 (7), S. 1889 - 1906 (2015)

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2014

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Kopf, M.; Klähn, S.; Voss, B.; Stüber, K.; Huettel, B.; Reinhardt, R.; Hess, W. R.: Finished Genome Sequence of the Unicellular Cyanobacterium Synechocystis sp. Strain PCC 6714. Genome Announcements 2 (4), e00757-14 (2014)

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Loehrer, M.; Vogel, A.; Huettel, B.; Reinhardt, R.; Benes, V.; Duplessis, S.; Usadel, B.; Schaffrath, U.: On the current status of Phakopsora pachyrhizi genome sequencing. Frontiers in Plant Science 5, 377 (2014)

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Meharg, C.; Khan, B.; Norton, G.; Deacon, C.; Johnson, D.; Reinhardt, R.; Huettel, B.; Meharg, A. A.: Trait-directed de novo population transcriptome dissects genetic regulation of a balanced polymorphism in phosphorus nutrition/arsenate tolerance in a wild grass, Holcus lanatus. New Phytologist 201, S. 144 - 1554 (2014)

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Petasch, J.; Disch, E.-M.; Markert, S.; Becher, D.; Schweder, T.; Huettel, B.; Reinhardt, R.; Harder, J.: The oxygen-independent metabolism of cyclic monoterpenes in Castellaniella defragrans 65Phen. BMC Microbiology 14, 164 (2014)

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Siewert, C.; Hess, W. R.; Duduk, B.; Huettel, B.; Reinhardt, R.; Buettner, C.; Kube, M.: Complete genome determination and analysis of Acholeplasma oculi strain 19L, highlighting the loss of basic genetic features in the Acholeplasmataceae. BMC Genomics 15, 931 (2014)

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2013

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Mann, A. J.; Hahnke, R. L.; Huang, S.; Werner, J.; Xing, P.; Barbeyon, T.; Huettel, B.; Stüber, K.; Reinhardt, R.: The Genome of the Alga-Associated Marine Flavobacterium Formosa agariphila KMM 3901T Reveals a Broad Potential for Degradation of Algal Polysaccharides. Applied and Environmental Microbiology 79, S. 6813 - 6822 (2013)

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Urbany, C.; Benke, A.; Marsian, J.; Huettel, B.; Reinhardt, R.; Stich, B.: Ups and downs of a transcriptional landscape shape iron deficiency associated chlorosis of the maize inbreds B73 and Mo17. BMC Plant Biology 13, 213 (2013)

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Wijnker, E.; James, G. V.; Ding, J.; Becker, F.; Klasen, J. R.; Rawat, V.; Rowan, B. A.; de Jong, D. F.; de Snoo, C. B.; Zapata, L. et al.; Huettel, B.; de Jong, H.; Ossowski, S.; Weigel, D.; Koornneef, M.; Keurentjes, J. J. B.; Schneeberger, K.: The genomic landscape of meiotic crossovers and gene conversions in Arabidopsis thaliana. ELIFE 2, e01426 (2013)

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Woehrmann, T.; de Barros Pinange, D. S.; Krapp, F.; Benko-Iseppon, A.-M.; Huettel, B.; Weising, K.: Development of 15 nuclear microsatellite markers in the genus Dyckia (Pitcairnioideae; Bromeliaceae) using 454 pyrosequencing. CONSERVATION GENETICS RESOURCES 5 (1), S. 81 - 84 (2013)

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2012

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Beutin, L.; Hammerl, J. A.; Strauch, E.; Reetz, J.; Dieckmann, R.; Kelner-Burgos, Y.; Martin, A.; Miko, A.; Strockbine, N. A.; Lindstedt, B. A. et al.; Horn, D.; Monse, H.; Huettel, B.; Mueller, I.; Stueber, K.; Reinhardt, R.: Spread of a Distinct Stx2-Encoding Phage Prototype among Escherichia coli O104:H4 Strains from Outbreaks in Germany, Norway, and Georgia. Journal of Virology 86 (19), S. 10444 - 10455 (2012)

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Bulgarelli, D.; Rott, M.; Schlaeppi, K.; Ver Loren van Themaat, E.; Ahmadinejad, N.; Assenza, F.; Rauf, P.; Huettel, B.; Reinhardt, R.; Schmelzer, E. et al.; Peplies, J.; Gloeckner, F. O.; Amann, R.; Eickhorst, T.; Schulze-Lefert, P.: Revealing structure and assembly cues for Arabidopsis root-inhabiting bacterial microbiota. NATURE 488 (7409), S. 91 - 95 (2012)

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Bus, A.; Hecht, J.; Huettel, B.; Reinhardt, R.; Stich, B.: High-throughput polymorphism detection and genotyping in Brassica napus using next-generation RAD sequencing. BMC Genomics 13, 281 (2012)

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