Scientific Publications since 2002 | Max Planck Institute for Plant Breeding Research

Max Planck Institute for Plant Breeding Research

Journal Article (107)

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Loo, E.; Tajima, Y.; Yamada, K.; Kido, S.; Hirase, T.; Ariga, H.; Fujiwara, T.; Tanaka, K.; Taji, T.; Somssich, I. et al.; Parker, J. E.; Saijo, Y.: Recognition of microbe/damage-associated molecular patterns by leucine-rich repeat pattern recognition receptor kinases confers salt tolerance in plants. Molecular Plant-Microbe Interactions (2021)

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Lopéz, H.; Schmitz, G.; Thoma, R.; Theres, K.: Super determinant1A, a RAWULdomain-containing protein, modulates axillary meristem formation and compound leaf development in tomato. The Plant Cell 33 (7), pp. 2412 - 2430 (2021)

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Ma, K.-W.; Niu, Y.; Jia, Y.; Ordon, J.; Copeland, C.; Emonet, A.; Geldner, N.; Guan, R.; Stolze, S. C.; Nakagami, H. et al.; Garrido-Oter, R.; Schulze-Lefert, P.: Coordination of microbe–host homeostasis by crosstalk with plant innate immunity. Nature Plants (2021)

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Madrid-Herrero, E.; Severing, E.; De Ansorena, E.; Kiefer, C.; Brand, L.; Martinez-Gallegos, R.; Woetzel, S.; Kemi, U.; Jiao, W.-B.; Schneeberger, K. et al.; Coupland, G.: Transposition and duplication of MADS-domain transcription factor genes in annual and perennial Arabis species modulates flowering. Proceedings of the National Academy of Sciences of the United States of America 118 (39), e2109204118 (2021)

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Mahdi, L. K.; Miyauchi, S.; Uhlmann, C.; Garrido-Oter, R.; Langen, G.; Wawra, S.; Niu, Y.; Guan, R.; Robertson-Albertyn, S.; Bulgarelli, D. et al.; Parker, J. E.; Zuccaro, A.: The fungal root endophyte Serendipita vermifera displays inter-kingdom synergistic beneficial effects with the microbiota in Arabidopsis thaliana and barley. The ISME Journal (2021)

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Mapar, M.; Chopra, D.; Stephan, L.; Schrader, A.; Sun, H.; Schneeberger, K.; Albani, M.; Coupland, G.; Huelskamp, M.: Genetic and Molecular Analysis of Root Hair Development in Arabis alpina. Frontiers in Plant Science 12, 767772 (2021)

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Marques, D. N.; Stolze, S. C.; Harzen, A.; Nogueira, M. L.; Batagin-Piotto, K. D.; Piotto, F. A.; Mason, C.; Azevedo, R. A.; Nakagami, H.: Comparative phosphoproteomic analysis of tomato genotypes with contrasting cadmium tolerance. Plant Cell Reports 40 (10), pp. 2001 - 2008 (2021)

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Mataigne, V.; Vannier, N.; Vandenkoornhuyse, P.; Hacquard, S.: Microbial Systems Ecology to Understand Cross-Feeding in Microbiomes. Frontiers in Microbiology 12 (2021)

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Mayer, T.; Mari, A.; Almario, J.; Murillo-Roos, M.; Abdullah, H. S. M.; Dombrowski, N.; Hacquard, S.; Kemen, E. M.; Agler, M. T.: Obtaining deeper insights into microbiome diversity using a simple method to block host and nontargets in amplicon sequencing. Molecular Ecology Resources 21 (6), pp. 1952 - 1965 (2021)

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Mesny, F.; Miyauchi, S.; Thiergart, T.; Pickel, B.; Atanasova, L.; Karlsson, M.; Huettel, B.; Barry, K.W.; Haridas, S.; Chen, C. et al.; Bauer, D.; Andreopoulos, W.; Pangilinan, J.; LaButti, K.; Riley, R.; Lipzen, A.; Clum, A.; Drula, E.; Henrissat, B.; Kohler, A.; Grigoriev, I.V.; Martin, F.M.; Hacquard, S.: Genetic determinants of endophytism in the Arabidopsis root mycobiome. Nature Communications 12, 7227 (2021)

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Monroe, J. G.; McKay, J. K.; Weigel, D.; Flood, P. J.: The population genomics of adaptive loss of function. Heredity 126, pp. 383 - 395 (2021)

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Naish, M.; Alonge, M.; Wlodzimierz, P.; Tock, A. J.; Abramson, B. W.; Schmuecker, A.; Mandakova, T.; Jamge, B.; Lambing, C.; Kuo, P. et al.; Yelina, N.; Hartwick, N.; Colt, K.; Smith, L.M.; Ton, J.; Kakutani, T.; Martienssen, R. A.; Schneeberger, K.; Lysak, M. A.; Berger, F.; Bousios, A.; Michael, T. P.; Schatz, M. C.; Henderson, I. R.: The genetic and epigenetic landscape of the Arabidopsis centromeres. SCIENCE 374 (6569), eabi7489, pp. 840 - + (2021)

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Nakano, R. T.: A Friend in Common: A Small GTPase in Independent PTI and ETI Immune Receptor Complexes. Plant and Cell Physiology 62 (11), pp. 1645 - 1647 (2021)

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O'Maoiléidigh, D. S.; van Driel, A. D.; Singh, A.; Sang, Q.; Le Bec, N.; Vincent, C.; Bertran Garcia de Olalla, B.; Vayssières, A.; Romera Branchat, M.; Severing, E. et al.; Martinez-Gallegos, R.; Coupland, G.: Systematic analyses of the MIR172 family members of Arabidopsis define their distinct roles in regulation of APETALA2 during floral transition. PLoS Biology 19 (2), e3001043 (2021)

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Ökmen, B.; Schwammbach, D.; Bakkeren, G.; Neumann, U.; Doehlemann, G.: The Ustilago hordei-barley interaction is a versatile system for characterization of fungal effectors. Journal of Fungi 7 (86) (2021)

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Parker, J.; Hessler, G.; Cui, H.: A new biochemistry connecting pathogen detection to induced defense in plants. New Phytologist (2021)

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Paulisic, S.; Qin, W.; Veraszto, H. A.; Then, C.; Alary, B.; Nogue, F.; Tsiantis, M.; Hothorn, M.; Martinez-Garcia, J. F.: Adjustment of the PIF7-HFR1 transcriptional module activity controls plant shade adaptation. EMBO Journal 40, e104273 (2021)

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Perea-Garcia, A.; Andres-Borderia, A.; Huijser, P.; Penarrubia, L.: The Copper-microRNA Pathway Is Integrated with Developmental and Environmental Stress Responses in Arabidopsis thaliana. International Journal of Molecular Sciences 22 (17), 9547 (2021)

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Petrella, R.; Cucinotta, M.; Mendes, M. A.; Underwood, C. J.; Colombo , L.: The emerging role of small RNAs in ovule development, a kind of magic. Plant Reproduction (2021)

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Pieper, R.; Tomé, F.; Pankin, A.; von Korff, M.: FLOWERING LOCUS T4 delays flowering and decreases floret fertility in barley. Journal of Experimental Botany 72, pp. 107 - 122 (2021)

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Plesken, C.; Pattar, P.; Reiss, B.; Noor, Z. N.; Zhang, L.; Klug, K.; Huettel, B.; Hahn, M.: Genetic Diversity of Botrytis cinerea Revealed by Multilocus Sequencing, and Identification of B. cinerea Populations Showing Genetic Isolation and Distinct Host Adaptation. Frontiers in Plant Science 12, 663027 (2021)

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Provart, N. J.; Brady, S. M.; Parry, G.; Schmitz, R. J.; Queitsch, C.; Bonetta, D.; Waese, J.; Schneeberger, K.; Loraine, A.E.: Anno genominis XX: 20 years of Arabidopsis genomics. The Plant Cell 33 (4), pp. 832 - 845 (2021)

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Pruitt, R. N.; Locci, F.; Wanke, F.; Zhang, L.; Saile, S. C.; Joe, A.; Karelina, D.; Hua, C.; Fröhlich, K.; Wan, W.-L. et al.; Hu, M.; Rao, S.; Stolze, S. C.; Harzen, A.; Gust, A. A.; Harter, K.; Joosten, M. H. A. J.; Thomma, B. P. H. J.; Zhou, J.-M.; Dangl, J. L.; Weigel, D.; Nakagami, H.; Oecking, C.; Kasmi, F. E.; Parker, J. E.; Nürnberger, T.: The EDS1–PAD4–ADR1 node mediates Arabidopsis pattern-triggered immunity. Nature (2021)

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Quero-Garcia, J.; Letourmy, P.; Campoy, J. A.; Branchereau, C.; Malchev, S.; Barreneche, T.; Dirlewanger, E.: Multi-year analyses on three populations reveal the first stable QTLs for tolerance to rain-induced fruit cracking in sweet cherry (Prunus avium L.). Horticulture Research 8 (1), 136 (2021)

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Ruytinx, J.; Miyauchi, S.; Hartmann-Wittulsky, S.; de Freitas Pereira, M.; Guinet, F.; Churin, J.-L.; Put, C.; Le Tacon, F.; Veneault-Fourrey, C.; Martin, F. et al.; Kohler, A.: A Transcriptomic Atlas of the Ectomycorrhizal Fungus Laccaria bicolor. Microorganisms 9 (12), 2612 (2021)

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Sanagi, M.; Aoyama, S.; Kubo, A.; Lu, Y.; Sato, Y.; Ito, S.; Abe, M.; Mitsuda, N.; Ohme-Takagi, M.; Kiba, T. et al.; Nakagami, H.; Rolland, F.; Yamaguchi, J.; Imaizumi, T.; Sato, T.: Low nitrogen conditions accelerate flowering by modulating the phosphorylation state of FLOWERING BHLH 4 in Arabidopsis. Proceedings of the National Academy of Sciences of the United States of America 118 (19), e2022942118 (2021)

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Saur, I. M. L.; Hueckelhoven, R.: Recognition and defence of plant-infecting fungal pathogens. Journal of Plant Physiology 256, 153324 (2021)

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Saur, I. M. L.; Panstruga, R.; Schulze-Lefert, P.: NOD-like receptor-mediated plant immunity: from structure to cell death. Nature Reviews Immunology 21, pp. 305 - 318 (2021)

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Savadel, S. D.; Hartwig, T.; Turpin, Z. M.; Vera, D. L.; Lung, P. Y.; Sui, X.; Blank, M.; Frommer, W. B.; Dennis, J. H.; Zhang, J. et al.; Bass, H. W.: The native cistrome and sequence motif families of the maize ear. PLoS Genetics 17 (8), e1009689 (2021)

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Schneider, C.; Woehle, C.; Greve, C.; D'Haese, C. A.; Wolf, M.; Hiller, M.; Janke, A.; Balint, M.; Huettel, B.: Two high-quality de novo genomes from single ethanol-preserved specimens of tiny metazoans (Collembola). GigaScience 10 (5), giab035, pp. 1 - 12 (2021)

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Schrinner, S.; Goel, M.; Wulfert, M.; Spohr, P.; Schneeberger, K.; Klau, G. W.: Using the longest run subsequence problem within homology-based scaffolding. Algorithms for Molecular Biology 16 (1), 11 (2021)

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Schuetz, V.; Frindte, K.; Cui, J.; Zhang, P.; Hacquard, S.; Schulze-Lefert, P.; Knief, C.; Schulz, M.; Doermann, P.: Differential Impact of Plant Secondary Metabolites on the Soil Microbiota. Frontiers in Microbiology 12, 666010 (2021)

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Schurack, S.; Depotter, J.R.L.; Gupta, D.; Thines, M.; Doehlemann, G.: Comparative transcriptome profiling identifies maize line specificity of fungal effectors in the maize-Ustilago maydis interaction. The Plant Journal (2021)

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Sergeeva, A.; Liu, H.; Mai, H.-J.; Mettler-Altmann, T.; Kiefer, C.; Coupland, G.; Bauer, P.: Cytokinin-promoted secondary growth and nutrient storage in the perennial stem zone of Arabis alpina. The Plant Journal 105 (6), pp. 1459 - 1476 (2021)

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Sexauer, M.; Shen, D.; Schon, M.; Andersen, T. G.; Markmann, K.: Visualizing polymeric components that define distinct root barriers across plant lineages. Development 148 (23), dev199820 (2021)

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Shimasaki, T.; Masuda, S.; Garrido-Oter, R.; Kawasaki, T.; Aoki, Y.; Shibata, A.; Suda, W.; Shirasu, K.; Yazaki, K.; Nakano, R. T. et al.; Sugiyama, A.: Tobacco Root Endophytic Arthrobacter Harbors Genomic Features Enabling the Catabolism of Host-Specific Plant Specialized Metabolites. mBio 12 (3), e00846-21 (2021)

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Siebers, M.; Walla, A.; Rutjes, T.; Muller, M.-F.; von Korff, M.: Application of DNA Fingerprinting using the D1S80 Locus in Lab Classes. JOVE-JOURNAL OF VISUALIZED EXPERIMENTS (173), e62305 (2021)

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Soppe, W. J. J.; Vinegra de la Torre, N.; Albani, M.: The Diverse Roles of FLOWERING LOCUS C in Annual and Perennial Brassicaceae Species. Frontiers in Plant Science 12, 627258 (2021)

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Sugiyama, R.; Li, R.; Kuwahara, A.; Nakabayashi, R.; Sotta, N.; Mori, T.; Ito, T.; Ohkama-Ohtsu, N.; Fujiwara, T.; Saito, K. et al.; Nakano, R. T.; Bednarek, P.; Hirai, M. Y.: Retrograde sulfur flow from glucosinolates to cysteine in Arabidopsis thaliana. Proceedings of the National Academy of Sciences of the United States of America 118 (22), e2017890118 (2021)

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Sun, X.; Lapin, D.; Feehan, J. M.; Stolze, S. C.; Kramer, K.; Dongus, J. A.; Rzemieniewski, J.; Blanvillain-Baufumé, S.; Harzen, A.; Bautor, J. et al.; Derbyshire, P.; Menke, F. L. H.; Finkemeier, I.; Nakagami, H.; Jones, J. D. G.; Parker, J. E.: Pathogen effector recognition-dependent association of NRG1 with EDS1 and SAG101 in TNL receptor immunity. Nature Communications 12 (1), 3335 (2021)

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Takahara, H.; Yamaguchi, S.; Omura, N.; Nakajima, S.; Otoku, K.; Tanaka, S.; Ogura, K.; Kleemann, J.; O'Connell, R.: The Colletotrichum higginsianum secreted effector protein ChEC91 induces plant cell death. Journal of General Plant Pathology 87 (6), pp. 344 - 353 (2021)

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Tian, H.; Li, Y.; Wang, C.; Xu, X.; Zhang, Y.; Zeb, Q.; Zicola, J.; Turck, F.; Li, L.; Lu, Z. et al.; Liu, L.: Photoperiod-responsive changes in chromatin accessibility in phloem companion and epidermis cells of Arabidopsis leaves. The Plant Cell 33 (3), pp. 475 - 491 (2021)

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Vaddepalli, P.; de Zeeuw, T.; Strauß, S.; Buerstenbinder, K.; Liao, C.-Y.; Ramalho, J. J.; Smith, R. S.; Weijers, D.: Auxin-dependent control of cytoskeleton and cell shape regulates division orientation in the Arabidopsis embryo. Current Biology 31 (22), pp. 4946 - 4955.e4 (2021)

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Vijayan, A.; Tofanelli, R.; Strauß, S.; Cerrone, L.; Wolny, A.; Strohmeier, J.; Kreshuk, A.; Hamprecht, F. A.; Smith, R. S.; Schneitz, K.: A digital 3D reference atlas reveals cellular growth patterns shaping the Arabidopsis ovule. eLife 10, e63262 (2021)

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Wang, Y.; van Rengs, W. M. J.; Zaidan, M. W. A.; Underwood, C. J.: Meiosis in crops: from genes to genomes. Journal of Experimental Botany (2021)

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Wanke, A.; Malisic, M.; Wawra, S.; Zuccaro, A.: Unraveling the sugar code: the role of microbial extracellular glycans in plant-microbe interactions. Journal of Experimental Botany 72, pp. 15 - 35 (2021)

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Winkelmueller, T. M.; Entila, F.; Anver, S.; Piasecka, A.; Song, B.; Dahms, E.; Sakakibara, H.; Gan, X.; Kułak, K.; Sawikowska, A. et al.; Krajewski, P.; Garrido-Oter, R.; Tsiantis, M.; Fukushima, K.; Schulze-Lefert, P.; Laurent, S.; Bednarek, P.; Tsuda, K.: Gene expression evolution in pattern-triggered immunity within Arabidopsis thaliana and across Brassicaceae species. The Plant Cell, koab073 (2021)

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Wippel, K.; Tao, K.; Niu, Y.; Zgadzaj, R. L.; Kiel, N.; Guan, R.; Dahms, E.; Zhang, P.; Jensen, D. B.; Logemann, E. et al.; Radutoiu, S.; Schulze-Lefert, P.; Garrido Oter, R.: Host preference and invasiveness of commensal bacteria in the Lotus and Arabidopsis root microbiota. Nature Microbiology (2021)

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Wolinska, K. W.; Vannier, N.; Thiergart, T.; Pickel, B.; Gremmen, S.; Piasecka, A.; Piślewska-Bednarek, M.; Nakano, R. T.; Belkhadir, Y.; Bednarek, P. et al.; Hacquard, S.: Tryptophan metabolism and bacterial commensals prevent fungal dysbiosis in Arabidopsis roots. Proceedings of the National Academy of Sciences of the United States of America 118 (49), e2111521118 (2021)

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Xing, Y.; Xu, N.; Bhandari, D. D.; Lapin, D.; Sun, X.; Luo, X.; Wang, Y.; Cao, J.; Wang, H.; Coaker, G. et al.; Parker, J. E.; Liu, J.: Bacterial effector targeting of a plant iron sensor facilitates iron acquisition and pathogen colonization. The Plant Cell, koab075 (2021)

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