RegionsAnalysis: this Matlab code can be used for different high-throughput image processing tasks. For instance, it can be used to quantify fluorescence expression domains at the tissue level.
Organism-Tissue: C++ code for performing numerical simulations at both cellular and tissue levels, composed by two similar but different codes: Organism and Tissue. We develop it together with the Jönsson lab (SLCU, Cambridge, UK) and other labs.
Our publications have associated code to reproduce our results, referred within each publication.