Current PhD Students

Publications of J. E. Parker

Journal Article (103)

2021
Journal Article
Bruessow, F.; Bautor, J.; Hoffmann, G.; Yildiz, I.; Zeier, J.; Parker, J. E.: Natural variation in temperature-modulated immunity uncovers transcription factor bHLH059 as a thermoresponsive regulator in Arabidopsis thaliana. PLoS Genetics 17 (1), e1009290 (2021)
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Chaudhry, V.; Runge, P.; Sengupta, P.; Doehlemann, G.; Parker, J. E.; Kemen, E.: Shaping the leaf microbiota: plant-microbe-microbe interactions. Special Issue 72 (1), pp. 36 - 56 (2021)
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Dongus, J. A.; Parker, J. E.: At the nexus of intracellular and surface receptor immunity. Current Opinion in Plant Biology 32, 102039 (2021)
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Pruitt, R. N.; Locci, F.; Wanke, F.; Zhang, L.; Saile, S. C.; Joe, A.; Karelina, D.; Hua, C.; Fröhlich, K.; Wan, W.-L. et al.; Hu, M.; Rao, S.; Stolze, S. C.; Harzen, A.; Gust, A. A.; Harter, K.; Joosten, M. H. A. J.; Thomma, B. P. H. J.; Zhou, J.-M.; Dangl, J. L.; Weigel, D.; Nakagami, H.; Oecking, C.; Kasmi, F. E.; Parker, J. E.; Nürnberger, T.: The EDS1–PAD4–ADR1 node mediates Arabidopsis pattern-triggered immunity. Nature (2021)
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Xing, Y.; Xu, N.; Bhandari, D. D.; Lapin, D.; Sun, X.; Luo, X.; Wang, Y.; Cao, J.; Wang, H.; Coaker, G. et al.; Parker, J. E.; Liu, J.: Bacterial effector targeting of a plant iron sensor facilitates iron acquisition and pathogen colonization. The Plant Cell, koab075 (2021)
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Zhao, C.; Tang, Y.; Wang, J.; Zeng, Y.; Sun, H.-Q.; Zheng, Z.; Su, R.; Schneeberger, K.; Parker, J. E.; Cui, H.: A mis-regulated cyclic nucleotide-gated channel mediates cytosolic calcium elevation and activates immunity in Arabidopsis. New Phytologist 230 (3), pp. 1078 - 1094 (2021)
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2020
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Dongus, J. A.; Bhandari, D. D.; Patel, M.; Archer, L.; Dijkgraaf, L.; Deslandes, L.; Shah, J.; Parker, J. E.: Arabidopsis PAD4 lipase-like domain is sufficient for resistance to green peach aphid. Molecular Plant-Microbe Interactions 33, pp. 328 - 335 (2020)
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Harvey, S.; Kumari, P.; Lapin, D.; Griebel, T.; Hickman, R.; Guo, W.; Zhang, R.; Parker, J.; Beynon, J.; Denby, K. et al.; Steinbrenner, J.: Downy Mildew effector HaRxL21 interacts with the transcriptional repressor TOPLESS to promote pathogen susceptibility. PLoS Pathogens 16 (8), e1008835 (2020)
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Lapin, D.; Bhandari, D. D.; Parker, J.: Multidimensional gene regulatory landscape of a bacterial pathogen in plants. Annual Review of Phytopathology 58, pp. 253 - 276 (2020)
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Ma, S.; Lapin, D.; Liu, L.; Sun, Y.; Song, W.; Zhang, X.; Logemann, E.; Yu, D.; Wang, J.; Jirschitzka, J. et al.; Han, Z.; Schulze-Lefert, P.; Parker, J. E.; Chai, J.: Direct pathogen-induced assembly of an NLR immune receptor complex to form a holoenzyme. Science Magazine 370 (6521), eabe3069 (2020)
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Neubauer, M.; Serrano, I.; Rodibaugh, N.; Bhandari, D. D.; Bautor, J.; Parker, J. E.; Innes, R. W.: Arabidopsis EDR1 Protein Kinase Regulates the Association of EDS1 and PAD4 to Inhibit Cell Death. Molecular Plant-Microbe Interactions 33, pp. 693 - 703 (2020)
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2019
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Bailey-Serres, J.; Parker, J. E.; Ainsworth, E. A.; Oldroyd, G. E. D.; Schroeder, J. I.: Genetic strategies for improving crop yields. Nature 575, pp. 109 - 118 (2019)
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Bhandari, D. D.; Lapin, D.; Kracher, B.; von Born, P.; Bautor, J.; Niefind, K.; Parker, J. E.: An EDS1 heterodimer signalling surface enforces timely reprogramming of immunity genes in Arabidopsis. Nature Communications 10, 772 (2019)
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Deremetz, A.; Le Roux, C.; Idir, Y.; Brousse, C.; Agorio, A.; Gy, I.; Parker, J. E.; Bouché, N.: Antagonistic actions of FPA and IBM2 regulate transcript processing from genes containing heterochromatin. Plant Physiology (2019)
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Lapin, D.; Kovacova, V.; Sun, X.; Dongus, J. A.; Bhandari, D.; von Born, P.; Bautor, J.; Guarneri, N.; Rzemieniewski, J.; Stuttmann, J. et al.; Beyer, A.; Parker, J. E.: A Coevolved EDS1-SAG101-NRG1 Module Mediates Cell Death Signaling by TIR-Domain Immune Receptors. The Plant Cell (2019)
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Parker, J.: Early Leads to Mechanisms of Plant Cultivar-Specific Disease Resistance. Plant Cell 31 (7), pp. 1410 - 1411 (2019)
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Voss, M.; Toelzer, C.; Bhandari, D. D.; Parker, J. E.; Niefind, K.: Arabidopsis immunity regulator EDS1 in a PAD4/SAG101-unbound form is a monomer with an inherently inactive conformation. Journal of Structural Biology 208, 107390 (2019)
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2018
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Atanasov, K. E.; Liu, C.; Erban, A.; Kopka, J.; Parker, J. E.; Alcázar, R.: NLR mutations suppressing immune hybrid incompatibility and their effects on disease resistance. Plant Physiology 177, pp. 1152 - 1169 (2018)
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Cui, H.; Qiu, J.; Zhou, Y.; Bhandari, D. D.; Zhao, C.; Bautor, J.; Parker, J. E.: Antagonism of Transcription Factor MYC2 by EDS1/PAD4 Complexes Bolsters Salicylic Acid Defense in Arabidopsis Effector-Triggered Immunity. Molecular Plant 11 (8), pp. 1053 - 1066 (2018)
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Jacob, F.; Kracher, B.; Mine, A.; Seyfferth, C.; Blanvillain-Baufumé, S.; Parker, J. E.; Tsuda, K.; Schulze-Lefert, P.; Maekawa, T.: A dominant-interfering camta3 mutation compromises primary transcriptional outputs mediated by both cell surface and intracellular immune receptors in Arabidopsis thaliana. New Phytologist 217 (4), pp. 1667 - 1680 (2018)
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Joglekar, S.; Suliman, M. N. S.; Bartsch, M.; Halder, V.; Maintz, J.; Bautor, J.; Zeier, J.; Parker, J. E.; Kombrink, E.: Chemical Activation of EDS1/PAD4 Signaling Leading to Pathogen Resistance in Arabidopsis. Plant and Cell Physiology 59 (8), pp. 1592 - 1607 (2018)
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2017
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Ariga, H.; Katori, T.; Tsuchimatsu, T.; Hirase, T.; Tajima, Y.; Parker, J. E.; Alcázar, R.; Koornneef, M.; Hoekenga, O.; Lipka, A. E. et al.; Gore, M. A.; Sakakibara, H.; Kojima, M.; Kobayashi, Y.; Iuchi, S.; Kobayashi, M.; Shinozaki, K.; Sakata, Y.; Hayashi, T.; Saijo, Y.; Taji, T.: NLR locus-mediated trade-off between abiotic and biotic stress adaptation in Arabidopsis. Nature Plants 3, 17072 (2017)
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Cui, H.; Gobbato, E.; Kracher, B.; Qiu, J.; Bautor, J.; Parker, J. E.: A core function of EDS1 with PAD4 is to protect the salicylic acid defense sector in Arabidopsis immunity. New Phytologist 213, 10.1111/nph.14302, pp. 1802 - 1817 (2017)
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Riedlmeier, M.; Ghirardo, A.; Wenig, M.; Knappe, C.; Koch, K.; Georgii, E.; Dey, S.; Parker, J. E.; Schnitzler , J. P.; Vlot, C. A.: Monoterpenes support systemic acquired resistance within and between plants. The Plant Cell 29,6, pp. 1440 - 1459 (2017)
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2016
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Kunz, H.-H.; Park, J.; Mevers, E.; Acevedo Garcia, J.; Highhouse, S.; Gerwick, W. H.; Parker, J. E.; Schroeder, J. I.: Small Molecule DFPM Derivative-Activated Plant Resistance Protein Signaling in Roots Is Unaffected by EDS1 Subcellular Targeting Signal and Chemical Genetic Isolation of victr R-Protein Mutants. PLoS One 11 (5), e0155937 (2016)
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Rhee, S. Y.; Parker, J. E.; Mockler, T. C.: A glimpse into the future of genome-enabled plant biology from the shores of Cold Spring Harbor. GENOME BIOLOGY 17, 3 (2016)
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Stuttmann, J.; Peine, N.; Garcia, A. V.; Wagner, C.; Choudhury, S. R.; Wang, Y.; James, G. V.; Griebel, T.; Alcázar, R.; Tsuda, K. et al.; Schneeberger, K.; Parker, J. E.: Arabidopsis thaliana DM2h (R8) within the Landsberg RPP1-like Resistance Locus Underlies Three Different Cases of EDS1-Conditioned Autoimmunity. PLoS Genetics 12 (4), e1005990 (2016)
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2015
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Cui, H.; Tsuda, K.; Parker, J. E.: Effector-Triggered Immunity: From Pathogen Perception to Robust Defense. ANNUAL REVIEW OF PLANT BIOLOGY, VOL 66, pp. 487 - 511 (2015)
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Le Roux, C.; Huet, G.; Jauneau, A.; Camborde, L.; Tremousaygue, D.; Kraut, A.; Zhou, B.; Levaillant, M.; Adachi, H.; Yoshioka, H. et al.; Raffaele, S.; Berthome, R.; Coute, Y.; Parker, J. E.; Deslandes, L.: A Receptor Pair with an Integrated Decoy Converts Pathogen Disabling of Transcription Factors to Immunity. Cell 161 (5), pp. 1074 - 1088 (2015)
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Makandar, R.; Nalam, V. J.; Chowdhury, Z.; Sarowar, S.; Klossner, G.; Lee, H.; Burdan, D.; Trick, H. N.; Gobbato, E.; Parker, J. E. et al.; Shah, J.: The Combined Action of ENHANCED DISEASE SUSCEPTIBILITY1, PHYTOALEXIN DEFICIENT4, and SENESCENCE-ASSOCIATED101 Promotes Salicylic Acid-Mediated Defenses to Limit Fusarium graminearum Infection in Arabidopsis thaliana. Molecular Plant-Microbe Interactions 28 (8), pp. 943 - 953 (2015)
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2014
Journal Article
Alcazar, R.; von Reth, M.; Bautor, J.; Chae, E.; Weigel, D.; Koornneef, M.; Parker, J.: Analysis of a Plant Complex Resistance Gene Locus Underlying Immune-Related Hybrid Incompatibility and Its Occurrence in Nature. PLoS Genetics 10 (12), e1004848 (2014)
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Breitenbach, H. H.; Wenig, M.; Wittek, F.; Jorda, L.; Maldonado-Alconada, A. M.; Sarioglu, H.; Colby, T.; Knappe, C.; Bichlmeier, M.; Pabst, E. et al.; Mackey, D.; Parker, J. E.; Vlot, A. C.: Contrasting Roles of the Apoplastic Aspartyl Protease APOPLASTIC, ENHANCED DISEASE SUSCEPTIBILITY1-DEPENDENT1 and LEGUME LECTIN-LIKE PROTEIN1 in Arabidopsis Systemic Acquired Resistance. Plant Physiology 165 (2), pp. 791 - 809 (2014)
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Carstens, M.; McCrindle, T. K.; Adams, N.; Diener, A.; Guzha, D. T.; Murray, S. L.; Parker, J. E.; Denby, K. J.; Ingle, R. A.: Increased Resistance to Biotrophic Pathogens in the Arabidopsis Constitutive Induced Resistance 1 Mutant Is EDS1 and PAD4-Dependent and Modulated by Environmental Temperature. PLoS One 9 (10), e109853 (2014)
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Doehlemann, G.; Requena, N.; Schaefer, P.; O'Connell, R.; Parker, J. E.: Reprogramming of plant cells by filamentous plant-colonizing microbes. New Phytologist 204 (4), DOI: 10.1111/nph.12938, pp. 803 - 814 (2014)
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Gloggnitzer, J.; Akimcheva, S.; Srinivasan, A.; Kusenda, B.; Riehs, N.; Stampfl, H.; Bautor, J.; Dekrout, B.; Jonak, C.; Jimenez-Gomez, J. M. et al.; Parker, J. E.; Riha, K.: Nonsense-Mediated mRNA Decay Modulates Immune Receptor Levels to Regulate Plant Antibacterial Defense. CELL HOST & MICROBE 16 (3), pp. 376 - 390 (2014)
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Griebel, T.; Maekawa, T.; Parker, J. E.: NOD-like receptor cooperativity in effector-triggered immunity. Trends in Immunology 35 (11), pp. 562 - 570 (2014)
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Parker, J.: Co-opting the Cell-Cycle Machinery for Plant Immunity. CELL HOST & MICROBE 16 (6), pp. 707 - 709 (2014)
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Pel, M. J. C.; Wintermans, P. C. A.; Cabral, A.; Robroek, B. J. M.; Seidl, M. F.; Bautor, J.; Parker, J. E.; Van den Ackerveken, G.; Pieterse, C. M. J.: Functional Analysis of Hyaloperonospora arabidopsidis RXLR Effectors. PLoS One 9 (11), e110624 (2014)
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Williams, S. J.; Sohn, K. H.; Wan, L.; Bernoux, M.; Sarris, P. F.; Segonzac, C.; Ve, T.; Ma, Y.; Saucet, S. B.; Ericsson, D. J. et al.; Casey, L. W.; Lonhienne, T.; Winzor, D. J.; Zhang, X.; Coerdt, A.; Parker, J. E.; Dodds, P. N.; Kobe, B.; Jones, J. D. G.: Structural Basis for Assembly and Function of a Heterodimeric Plant Immune Receptor. Science 344 (6181), pp. 299 - 303 (2014)
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Wittek, F.; Hoffmann, T.; Kanawati, B.; Bichlmeier, M.; Knappe, C.; Wenig, M.; Schmitt-Kopplin, P.; Parker, J. E.; Schwab, W.; Vlot, A. C.: Arabidopsis ENHANCED DISEASE SUSCEPTIBILITY1 promotes systemic acquired resistance via azelaic acid and its precursor 9-oxo nonanoic acid. Journal of Experimental Botany 65 (20), pp. 5919 - 5931 (2014)
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2013
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Heidrich, K.; Tsuda, K.; Blanvillain-Baufumé, S.; Wirthmueller, L.; Bautor, J.; Parker, J. E.: Arabidopsis TNL-WRKY domain receptor RRS1 contributes to temperature-conditioned RPS4 auto-immunity. FRONTIERS IN PLANT SCIENCE 4, 403 (2013)
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Hoser, R.; Zurczak, M.; Lichocka, M.; Zuzga, S.; Dadlez, M.; Samuel, M. A.; Ellis, B. E.; Stuttmann, J.; Parker, J. E.; Hennig, J. et al.; Krzymowska, M.: Nucleocytoplasmic partitioning of tobacco N receptor is modulated by SGT1. New Phytologist 200 (1), pp. 158 - 171 (2013)
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Wagner, S.; Stuttmann, J.; Rietz, S.; Guerois, R.; Brunstein, E.; Bautor, J.; Niefind, K.; Parker, J. E.: Structural Basis for Signaling by Exclusive EDS1 Heteromeric Complexes with SAG101 or PAD4 in Plant Innate Immunity. CELL HOST & MICROBE 14 (6), pp. 619 - 630 (2013)
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Zbierzak, A. M.; Porfirova, S.; Griebel, T.; Melzer, M.; Parker, J. E.; Doermann, P.: A TIR-NBS protein encoded by Arabidopsis Chilling Sensitive 1 (CHS1) limits chloroplast damage and cell death at low temperature. The Plant Journal 75 (4), pp. 539 - 552 (2013)
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2012
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Heidrich, K.; Blanvillain-Baufumé, S.; Parker, J. E.: Molecular and spatial constraints on NB-LRR receptor signaling. Current Opinion in Plant Biology 15 (4), pp. 385 - 391 (2012)
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Kim, T.-H.; Kunz, H.-H.; Bhattacharjee, S.; Hauser, F.; Park, J.; Engineer, C.; Liu, A.; Ha, T.; Parker, J. E.; Gassmann, W. et al.; Schroeder, J. I.: Natural Variation in Small Molecule–Induced TIR-NB-LRR Signaling Induces Root Growth Arrest via EDS1- and PAD4-Complexed R Protein VICTR in Arabidopsis. The Plant Cell (24), tpc.112.107235 , pp. 5177 - 5192 (2012)
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Louis, J.; Gobbato, E.; Mondal, H. A.; Feys, B. J.; Parker, J. E.; Shah, J.: Discrimination of Arabidopsis PAD4 Activities in Defense against Green Peach Aphid and Pathogens. Plant Physiology 158 (4), pp. 1860 - 1872 (2012)
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Shin, J.; Heidrich, K.; Sánchez Villarreal, A.; Parker, J. E.; Davis, S. J.: TIME FOR COFFEE Represses Accumulation of the MYC2 Transcription Factor to Provide Time-of-Day Regulation of Jasmonate Signaling in Arabidopsis. Plant Cell 24 (6), 10.1105/tpc.111.095430. , pp. 2470 - 2482 (2012)
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2011
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Alcázar, R.; Parker, J. E.: The impact of temperature on balancing immune responsiveness and growth in Arabidopsis. Trends in Plant Science 16, pp. 666 - 675 (2011)
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Cabral, A.; Stassen, J. H. M.; Seidl, M. F.; Bautor, J.; Parker, J. E.; Van den Ackerveken, G.: Identification of Hyaloperonospora arabidopsidis Transcript Sequences Expressed during Infection Reveals Isolate-Specific Effectors. PLoS ONE 6 (5), e19328 (2011)
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