Publications

Castellani, M., Zhang, M., Thangavel, G., Sucre, Y. M., Lux, T., Campoy, J. A., Marek, M., Huettel, B., Sun, H., Mayer, K. F. X., Schneeberger, K., Marques, A. (2023) Meiotic recombination dynamics in plants with repeat-based holocentromeres shed light on the primary drivers of crossover patterning. bioRxiv 2023.04.28.538594; doi: https://doi.org/10.1101/2023.04.28.538594  

Costa, L.,  Marques, A., Buddenhagen, C. E., Pedrosa-Harand, A., Souza, G. Investigating the diversification of holocentromeric satDNA Tyba in Rhynchospora (Cyperaceae), Annals of Botany, 2023; mcad036, https://doi.org/10.1093/aob/mcad036

Thangavel, G., Hofstatter, P.G., Mercier, R., Marques A. Tracing the evolution of the plant meiotic molecular machinery. Plant Reproduction (2023). https://doi.org/10.1007/s00497-022-00456-1

Hofstatter, P. G., Thangavel, G., Lux, T., Neumann, P., Vondrak, T., Novak, P., Zhang, M., Costa, L., Castellani, M., Scott, A., Toegelová, H., Fuchs, J., Mata-Sucre, Y., Dias, Y., Vanzela, A. L. L., Huettel, B., Almeida, C. C. S., Šimková, H., Souza, G., Pedrosa-Harand, A., Macas, J., Mayer, K. F. X., Houben, A., & Marques, A. (2022). Repeat-based holocentromeres influence genome architecture and karyotype evolution. Cell. doi:10.1016/j.cell.2022.06.045. https://www.cell.com/cell/fulltext/S0092-8674(22)00797-8

Marques, A., Hufnagel, B., Soriano, A., Péret, B. The Highly Repeat-Diverse (Peri) Centromeres of White Lupin (Lupinus albus L.). Frontiers in Plant Science 13 (2022).  https://www.frontiersin.org/article/10.3389/fpls.2022.862079. 

Maria Alice Silva Oliveira, Tomáz Nunes, Maria Aparecida dos Santos, Danyelle Ferreira, Iara Costa, Brena Van-Lume, Sarah Seco Marques da Silva, Ronaldo Simão de Oliveira, Marcelo Simon, Gaus Silvestre de Andrade Lima, Danilo Soares Gissi, Cicero Carlos de Souza Almeida, Gustavo Souza and André Marques. High-throughput genomic data reveal complex phylogenetic relationships in Stylosanthes Sw. (Leguminosae). Frontiers in Genetics 12, 1846 (2021). https://www.frontiersin.org/article/10.3389/fgene.2021.727314     

Lucas Costa, André Marques, Chris Buddenhagen, William Wayt Thomas, Bruno Huettel, Veit Schubert, Steven Dodsworth, Andreas Houben, Gustavo Souza, Andrea Pedrosa-Harand, Aiming off the target: recycling target capture sequencing reads for investigating repetitive DNA, Annals of Botany, 2021; mcab063, https://doi.org/10.1093/aob/mcab063

Barbosa, P., Schemczssen-Graeff, Z., Marques, A., da Silva, M., Favero, G.M., Sobreiro, B.P., de Almeida, M.C., Moreira-Filho, O., Silva, D.M.Z.d.A., Porto-Foresti, F., Foresti, F., Artoni, R.F. Silencing of Transposable Elements Mediated by 5-mC and Compensation of the Heterochromatin Content by Presence of B Chromosomes in Astyanax scabripinnis. Cells 10, 1162 (2021). https://doi.org/10.3390/cells10051162

Hofstatter, P. G., Thangavel, G., Castellani, M., Marques, A. Meiosis Progression and Recombination in Holocentric Plants: What Is Known? Frontiers in Plant Science 12, 617 (2021). https://www.frontiersin.org/article/10.3389/fpls.2021.658296

Hufnagel, B., Marques, A., Soriano, A. et al. High-quality genome sequence of white lupin provides insight into soil exploration and seed quality. Nat Commun 11, 492 (2020). https://doi.org/10.1038/s41467-019-14197-9

Burchardt, P., Buddenhagen, C. E., Gaeta, M. L., Souza, M. D., Marques, A.*, Vanzela, A. L. L.* Holocentric Karyotype Evolution in Rhynchospora Is Marked by Intense Numerical, Structural, and Genome Size Changes. Frontiers in Plant Science 11, 1390 (2020). https://www.frontiersin.org/article/10.3389/fpls.2020.536507