Publications of K. Schneeberger

Kalhorzadeh, P.; Hu, Z.; Cools, T.; Amiard, S.; Willing, E.-M.; De Winne, N.; Gevaert, K.; De Jaeger, G.; Schneeberger, K.; White, C. I. et al.; De Veylder, L.: Arabidopsis thaliana RNase H2 Deficiency Counteracts the Needs for the WEE1 Checkpoint Kinase but Triggers Genome Instability. The Plant Cell 26 (9), pp. 3680 - 3692 (2014)

Pankin, A.; Campoli, C.; Dong, X.; Kilian, B.; Sharma, R.; Himmelbach, A.; Saini, R.; Davis, S. J.; Stein, N.; Schneeberger, K. et al.; von Korff, M.: Mapping-by-Sequencing Identifies HvPHYTOCHROME C as a Candidate Gene for the early maturity 5 Locus Modulating the Circadian Clock and Photoperiodic Flowering in Barley. Genetics 198 (1), pp. 383 - 396 (2014)

Rishmawi, L.; Sun, H.; Schneeberger, K.; Huelskamp, M.; Schrader, A.: Rapid Identification of a Natural Knockout Allele of ARMADILLO REPEAT-CONTAINING KINESIN1 That Causes Root Hair Branching by Mapping-By-Sequencing. Plant Physiology 166 (3), pp. 1280 - 1287 (2014)

Schneeberger, K.: Using next-generation sequencing to isolate mutant genes from forward genetic screens. Nature Reviews Genetics 15 (10), pp. 662 - 676 (2014)

Zee, P. C.; Mendes-Soares, H.; Yu, Y.-T. N.; Kraemer, S. A.; Keller, H.; Ossowski, S.; Schneeberger, K.; Velicer, G. J.: A SHIFT FROM MAGNITUDE TO SIGN EPISTASIS DURING ADAPTIVE EVOLUTION OF A BACTERIAL SOCIAL TRAIT. EVOLUTION 68 (9), pp. 2701 - 2708 (2014)

Bergonzi, S.; Albani, M.; Ver Loren van Themaat, E.; Nordstroem, K.; Wang, R.; Schneeberger, K.; Moerland, P. D.; Coupland, G.: Mechanisms of Age-Dependent Response to Winter Temperature in Perennial Flowering of Arabis alpina. Science 340 (6136), pp. 1094 - 1097 (2013)

James, G. V.; Patel, V.; Nordstroem, K.; Klasen, J. R.; Salome, P. A.; Weigel, D.; Schneeberger, K.: User guide for mapping-by-sequencing in Arabidopsis. GENOME BIOLOGY 14 (6), R61 (2013)

Koenig, D.; Jimenez-Gomez, J. M.; Kimura, S.; Fulop, D.; Chitwood, D. H.; Headland, L. R.; Kumar, R.; Covington, M. F.; Devisetty, U. K.; Tat, A. V. et al.; Tohge, T.; Bolger, A.; Schneeberger, K.; Ossowski, S.; Lanz, C.; Xiong, G.; Taylor-Teeples, M.; Brady, S. M.; Pauly, M.; Weigel, D.; Usadel, B.; Fernie, A. R.; Peng, J.; Sinha, N. R.; Maloof, J. N.: Comparative transcriptomics reveals patterns of selection in domesticated and wild tomato. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERLICA 110 (28), pp. E2655 - E2662 (2013)

Kopischke, M.; Westphal, L.; Schneeberger, K.; Clark, R.; Ossowski, S.; Wewer, V.; Fuchs, R.; Landtag, J.; Hause, G.; Doermann, P. et al.; Lipka, V.; Weigel, D.; Schulze-Lefert, P.; Scheel, D.; Rosahl, S.: Impaired sterol ester synthesis alters the response of Arabidopsis thaliana to Phytophthora infestans. The Plant Journal 73 (3), pp. 456 - 468 (2013)

Logemann, E.; Birkenbihl, R.; Rawat, V.; Schneeberger, K.; Schmelzer, E.; Somssich, I. E.: Functional dissection of the PROPEP2 and PROPEP3 promoters reveals the importance of WRKY factors in mediating microbe-associated molecular pattern-induced expression. New Phytologist 198 (4), pp. 1165 - 1177 (2013)

Nordstroem, K.; Albani, M.; James, G. V.; Gutjahr, C.; Hartwig, B.; Turck, F.; Paszkowski, U.; Coupland, G.; Schneeberger, K.: Mutation identification by direct comparison of whole-genome sequencing data from mutant and wild-type individuals using k-mers. Nature biotechnology 31 (4), pp. 325 - 330 (2013)

Wijnker, E.; James, G. V.; Ding, J.; Becker, F.; Klasen, J. R.; Rawat, V.; Rowan, B. A.; de Jong, D. F.; de Snoo, C. B.; Zapata, L. et al.; Huettel, B.; de Jong, H.; Ossowski, S.; Weigel, D.; Koornneef, M.; Keurentjes, J. J. B.; Schneeberger, K.: The genomic landscape of meiotic crossovers and gene conversions in Arabidopsis thaliana. ELIFE 2, e01426 (2013)

Galvao, V. C.; Nordstroem, K.; Lanz, C.; Sulz, P.; Mathieu, J.; Pose, D.; Schmid, M.; Weigel, D.; Schneeberger, K.: Synteny-based mapping-by-sequencing enabled by targeted enrichment. The Plant Journal 71 (3), pp. 517 - 526 (2012)

Hartwig, B.; James, G. V.; Konrad, K.; Schneeberger, K.; Turck, F.: Fast Isogenic Mapping-by-Sequencing of Ethyl Methanesulfonate-Induced Mutant Bulks. Plant Physiology 160 (2), pp. 591 - 600 (2012)

Rutter, M. T.; Roles, A.; Conner, J. K.; Shaw, R. G.; Shaw, F. H.; Schneeberger, K.; Ossowski, S.; Weigel, D.; Fenster, C. B.: Fitness of Arabidopsis thaliana mutation accumulation lines whose spontaneous mutations are known. Evolution 66 (7), pp. 2335 - 2339 (2012)

Todesco, M.; Balasubramanian, S.; Cao, J.; Ott, F.; Sureshkumar, S.; Schneeberger, K.; Meyer, R. C.; Altmann, T.; Weigel, D.: Natural Variation in Biogenesis Efficiency of Individual Arabidopsis thaliana MicroRNAs. Current Biology 22 (2), pp. 166 - 170 (2012)

Cao, J.; Schneeberger, K.; Ossowski, S.; Guenther, T.; Bender, S.; Fitz, J.; Koenig, D.; Lanz, C.; Stegle, O.; Lippert, C. et al.; Wang, X.; Ott, F.; Mueller, J.; Alonso-Blanco, C.; Borgwardt, K.; Schmid, K.; Weigel, D.: Whole-genome sequencing of multiple Arabidopsis thaliana populations. NATURE GENETICS 43 (10), pp. 956 - U60 (2011)

Klein, J. D.; Ossowski, S.; Schneeberger, K.; Weigel, D.; Huson, D. H.: LOCAS - A Low Coverage Assembly Tool for Resequencing Projects. PLOS ONE 6 (8), 10.1371/journal.pone.0023455 (2011)