IMPRS 2011

2018

Journal Article

Jacob, F.; Kracher, B.; Mine, A.; Seyfferth, C.; Blanvillain-Baufumé, S.; Parker, J. E.; Tsuda, K.; Schulze-Lefert, P.; Maekawa, T.: A dominant-interfering camta3 mutation compromises primary transcriptional outputs mediated by both cell surface and intracellular immune receptors in Arabidopsis thaliana. New Phytologist 217 (4), pp. 1667 - 1680 (2018)

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Pislewska-Bednarek, M.; Nakano, R. T.; Hiruma, K.; Pastorczyk, M.; Sanchez-Vallet, A.; Singkaravanit-Ogawa, S.; Ciesiolka, D.; Takano, Y.; Molina, A.; Schulze-Lefert, P. et al.; Bednarek, P.: Glutathione Transferase U13 Functions in Pathogen-Triggered Glucosinolate Metabolism. Plant Physiology 176 (1), pp. 538 - 551 (2018)

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Robbins, C.; Thiergart, T.; Hacquard, S.; Garrido Oter, R.; Gans, W.; Peiter, E.; Schulze-Lefert, P.; Spaepen, S.: Root-associated bacterial and fungal community profiles of Arabidopsis thaliana are robust across contrasting soil P levels. Phytobiomes 2 (1), pp. 24 - 34 (2018)

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Journal Article

Sopeña-Torres, S.; Jorda, L.; Sanchez-Rodriguez, C.; Miedes, E.; Escudero, V.; Swamy, S.; Lopez, G.; Pislewska-Bednarek, M.; Lassowskat, I.; Lee, J. et al.; Gu, Y.; Haigis, S.; Alexander, D.; Pattathil, S.; Muñoz-Barrios, A.; Bednarek, P.; Somerville, S.; Schulze-Lefert, P.; Hahn, M.; Scheel, D.; Molina, A.: YODA MAP3K kinase regulates plant immune responses conferring broad-spectrum disease resistance. New Phytologist 218, pp. 661 - 680 (2018)

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Wibowo, A.; Becker, C.; Durr, J.; Price, J.; Spaepen, S.; Hilton, S.; Putra, H.; Papareddy, R.; Saintain, Q.; Harvey, S. et al.; Bending, G. D.; Schulze-Lefert, P.; Weigel, D.; Gutierrez-Marcos, J.: Partial maintenance of organ-specific epigenetic marks during plant asexual reproduction leads to heritable phenotypic variation. Proceedings of the National Academy of Sciences of the United States of America 115 (39), pp. E9145 - E9152 (2018)

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2017

Journal Article

Dombrowski, N.; Schlaeppi, K.; Agler, M.T.; Hacquard, S.; Kemen, E.; Garrido Oter, R.; Wunder, J.; Coupland, G.; Schulze-Lefert, P.: Root microbiota dynamics of perennial Arabis alpina are dependent on soil residence time but independent of flowering time. The ISME Journal 11, 10.1038/ismej.2016.109, pp. 43 - 55 (2017)

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Journal Article

Fukunaga, S.; Sogame, M.; Hata, M.; Singkaravanit-Ogawa, S.; Piślewska-Bednarek, M.; Onozawa-Komori, M.; Nishiuchi, T.; Hiruma, K.; Saitoh, H.; Terauchi, R. et al.; Kitakura, S.; Inoue, Y.; Bednarek, P.; Schulze-Lefert, P.; Takano, Y.: Dysfunction of Arabidopsis MACPF domain protein activates programmed cell death via tryptophan metabolism in MAMP-triggered immunity. The Plant Journal 89, pp. 381 - 393 (2017)

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Hacquard, S.; Spaepen, S.; Garrido-Oter, R.; Schulze-Lefert, P.: Interplay Between Innate Immunity and the Plant Microbiota. Annual Review of Phytopathology (55), pp. 565 - 589 (2017)

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Maekawa, T.; Schulze-Lefert, P.: Caught in the jump. Science Magazine 357, pp. 31 - 32 (2017)

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Nakano, R. T.; Piślewska-Bednarek, M.; Yamada, K.; Edger , P. P.; Miyahara, M.; Kondo, M.; Böttcher, C.; Mori, M.; Nishimura, M.; Schulze-Lefert, P. et al.; Hara-Nishimura, I.; Bednarek, P.: PYK10 myrosinase reveals a functional coordination between endoplasmic reticulum bodies and glucosinolates in Arabidopsis thaliana. The Plant Journal 89 (2), pp. 201 - 220 (2017)

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Sczyrba, A.; Hofmann, P.; Belmann, P.; Koslicki, D.; Janssen, S.; Droge, J.; Gregor, I.; Majda, S.; Fiedler, J.; Dahms, E. et al.; Bremges, A.; Fritz, A.; Garrido-Oter, R.; Jorgensen, T. S.; Shapiro, N.; Blood, P. D.; Gurevich, A.; Bai, Y.; Turaev, D.; DeMaere, M. Z.; Chikhi, R.; Nagarajan, N.; Quince, C.; Meyer, F.; Balvociute, M.; Hansen, L. H.; Sorensen, S. J.; Chia, B. K. H.; Denis, B.; Froula, J. L.; Wang, Z.; Egan, R.; Don Kang, D.; Cook, J. J.; Deltel, C.; Beckstette, M.; Lemaitre, C.; Peterlongo, P.; Rizk, G.; Lavenier, D.; Wu, Y.-W.; Singer, S. W.; Jain, C.; Strous, M.; Klingenberg, H.; Meinicke, P.; Barton, M. D.; Lingner, T.; Lin, H.-H.; Liao, Y.-C.; Silva, G. G. Z.; Cuevas, D. A.; Edwards, R. A.; Saha, S.; Piro, V. C.; Renard, B. Y.; Pop, M.; Klenk, H.-P.; Goker, M.; Kyrpides, N. C.; Woyke, T.; Vorholt, J. A.; Schulze-Lefert, P.; Rubin, E. M.; Darling, A. E.; Rattei, T.; McHardy, A. C.: Critical Assessment of Metagenome Interpretation — a benchmark of metagenomics software. Nature methods 14, pp. 1063 - 1071 (2017)

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2016

Journal Article

Hacquard, S.; Kracher, B.; Hiruma, K.; Muech, P. C.; Garrido Oter, R.; Thon, M. R.; Weimann, A.; Damm, U.; Dallery, J.-F.; Hainaut, M. et al.; Henrissat, B.; Lespinet, O.; Sacristan, S.; Ver Loren van Themaat, E.; Kemen, E.; McHardy, A. C.; Schulze-Lefert, P.; O'Connell, R. J.: Survival trade-offs in plant roots during colonization by closely related beneficial and pathogenic fungi. Nature Communications 7, 11362 (2016)

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Lu, X. L.; Kracher, B.; Saur, I. M.-L.; Bauer, S.; Ellwood, S. R.; Wise, R.; Yaeno, T.; Maekawa, T.; Schulze-Lefert, P.: Allelic barley MLA immune receptors recognize sequence-unrelated avirulence effectors of the powdery mildew pathogen. Proceedings of the National Academy of Sciences of the United States of America 113 (42), pp. E6486 - E6495 (2016)

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Zgadzaj, R. L.; Garrido Oter, R.; Jensen, D. B.; Koprivova, A.; Schulze-Lefert, P.; Radutoiu, S.: Root nodule symbiosis in Lotus japonicus drives the establishment of distinctive rhizosphere, root, and nodule bacterial communities. Proceedings of the National Academy of Sciences of the United States of America PNAS, Proceedings of the National Academy of Sciences 113 (49), pp. E7996 - E8005 (2016)

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2015

Journal Article

Bai, Y.; Mueller, D. B.; Srinivas, G.; Garrido Oter, R.; Potthoff, E.; Rott, M.; Dombrowski, N.; Muench, P. C.; Spaepen, S.; Remus-Emsermann, M. et al.; Huettel, B.; McHardy, A. C.; Vorholt, J. A.; Schulze-Lefert, P.: Functional overlap of the Arabidopsis leaf and root microbiota. Nature 528 (7582), pp. 364 - 369 (2015)

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Bulgarelli, D.; Garrido Oter, R.; Muench, P. C.; Weiman, A.; Droege, J.; Pan, Y.; McHardy, A. C.; Schulze-Lefert, P.: Structure and Function of the Bacterial Root Microbiota in Wild and Domesticated Barley. Cell Host & Microbe 17 (3), pp. 392 - 403 (2015)

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Hacquard, S.; Garrido Oter, R.; González, A.; Spaepen, S.; Ackermann, G.; Lebeis, S.; McHardy, A. C.; Dangl, J. L.; Knight, R.; Ley, R. et al.; Schulze-Lefert, P.: Microbiota and Host Nutrition across Plant and Animal Kingdoms. Cell Host & Microbe 17 (5), pp. 603 - 613 (2015)

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Journal Article

Lu, X.; Dittgen, J.; Pislewska-Bednarek, M.; Molina, A.; Schneider, B.; Svatos, A.; Doubsky, J.; Schneeberger, K.; Weigel, D.; Bednarek, P. et al.; Schulze-Lefert, P.: Mutant allele-specific uncoupling of PEN3 functions reveals engagement of the ABC transporter in distinct tryptophan metabolic pathways. Plant Physiology 168, pp. 814 - 827 (2015)

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Journal Article

Zamioudis, C.; Korteland, J.; Van Pelt, J. A.; van Hamersveld, M.; Dombrowski, N.; Bai, Y.; Hanson, J.; Van Verk, M. C.; Ling, H.-Q.; Schulze-Lefert, P. et al.; Pieterse, C. M. J.: Rhizobacterial volatiles and photosynthesis-related signals coordinate MYB72 expression in Arabidopsis roots during onset of induced systemic resistance and iron-deficiency responses. The Plant Journal 84 (2), pp. 309 - 322 (2015)

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2014

Journal Article

Doermann, P.; Kim, H.; Ott, T.; Schulze-Lefert, P.; Trujillo, M.; Wewer, V.; Hueckelhoven, R.: Cell-autonomous defense, re-organization and trafficking of membranes in plant-microbe interactions. NEW PHYTOLOGIST 204 (4), pp. 815 - 822 (2014)

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Journal Article

Guttman, D. S.; McHardy, A. C.; Schulze-Lefert, P.: Microbial genome-enabled insights into plant-microorganism interactions. Nature Reviews Genetics 15 (12), pp. 797 - 813 (2014)

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Journal Article

Ichikawa, M.; Hirano, T.; Enami, K.; Fuselier, T.; Kato, N.; Kwon, C.; Voigt, B.; Schulze-Lefert, P.; Baluska, F.; Sato, M. H.: Syntaxin of Plant Proteins SYP123 and SYP132 Mediate Root Hair Tip Growth in Arabidopsis thaliana. SI 55 (4), pp. 790 - 800 (2014)

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Journal Article

Kim, H.; O'Connell, R.; Maekawa-Yoshikawa, M.; Uemura, T.; Neumann, U.; Schulze-Lefert, P.: The powdery mildew resistance protein RPW8.2 is carried on VAMP721/722 vesicles to the extrahaustorial membrane of haustorial complexes. The Plant Journal 79 (5), pp. 835 - 847 (2014)

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Journal Article

Schlaeppi, K.; Dombrowski, N.; Garrido Oter, R.; Ver Loren van Themaat, E.; Schulze-Lefert, P.: Quantitative divergence of the bacterial root microbiota in Arabidopsis thaliana relatives. Proceedings of the National Academy of Sciences of the United States of America 111 (2), pp. 585 - 592 (2014)

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Journal Article

Weßling, R.; Epple, P.; Altmann, S.; He, Y.; Yang, L.; Henz, S. R.; McDonald, N.; Wiley, K.; Bader, K. C.; Glaesser, C. et al.; Mukhtar, M. S.; Haigis, S.; Ghamsari, L.; Stephens, A. E.; Ecker, J. R.; Vidal, M.; Jones, J. D. G.; Mayer, K. F. X.; Ver Loren van Themaat, E.; Weigel, D.; Schulze-Lefert, P.; Dangl, J. L.; Panstruga, R.; Braun, P.: Convergent Targeting of a Common Host Protein-Network by Pathogen Effectors from Three Kingdoms of Life. Cell Host & Microbe 16 (3), pp. 364 - 375 (2014)

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2013

Journal Article

Acevedo Garcia, J.; Collins, N. C.; Ahmadinejad, N.; Ma, L.; Houben, A.; Bednarek, P.; Benjdia, M.; Freialdenhoven, A.; Altmueller, J.; Nuernberg, P. et al.; Reinhardt, R.; Schulze-Lefert, P.; Panstruga, R.: Fine mapping and chromosome walking towards the Ror1 locus in barley (Hordeum vulgare L.). Theoretical and Applied Genetics 126 (12), pp. 2969 - 2982 (2013)

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Journal Article

Chang, C.; Yu, D.; Jiao, J.; Jing, S.; Schulze-Lefert, P.; Shen, Q.-H.: Barley MLA Immune Receptors Directly Interfere with Antagonistically Acting Transcription Factors to Initiate Disease Resistance Signaling. The Plant Cell 25 (3), pp. 1158 - 1173 (2013)

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Journal Article

Hacquard, S.; Kracher, B.; Maekawa, T.; Vernaldi, S.; Schulze-Lefert, P.; Ver Loren van Themaat, E.: Mosaic genome structure of the barley powdery mildew pathogen and conservation of transcriptional programs in divergent hosts. Proceedings of the National Academy of Sciences of the United States of America 110 (24), pp. E2219 - E2228 (2013)

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Kopischke, M.; Westphal, L.; Schneeberger, K.; Clark, R.; Ossowski, S.; Wewer, V.; Fuchs, R.; Landtag, J.; Hause, G.; Doermann, P. et al.; Lipka, V.; Weigel, D.; Schulze-Lefert, P.; Scheel, D.; Rosahl, S.: Impaired sterol ester synthesis alters the response of Arabidopsis thaliana to Phytophthora infestans. The Plant Journal 73 (3), pp. 456 - 468 (2013)

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Poraty-Gavra, L.; Zimmermann, P.; Haigis, S.; Bednarek, P.; Hazak, O.; Stelmakh, O. R.; Sadot, E.; Schulze-Lefert, P.; Gruissem, W.; Yalovsky, S.: The Arabidopsis Rho of Plants GTPase AtROP6 Functions in Developmental and Pathogen Response Pathways. Plant Physiology 161 (3), pp. 1172 - 1188 (2013)

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Wicker, T.; Oberhaensli, S.; Parlange, F.; Buchmann, J. P.; Shatalina, M.; Roffler, S.; Ben-David, R.; Dolezel, J.; Simkova, H.; Schulze-Lefert, P. et al.; Spanu, P. D.; Bruggmann, R.; Amselem, J.; Quesneville, H.; Ver Loren van Themaat, E.; Paape, T.; Shimizu, K. K.; Keller, B.: The wheat powdery mildew genome shows the unique evolution of an obligate biotroph. Nature Genetics 45 (9), pp. 1092 - + (2013)

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Journal Article

Yun, H. S.; Kwaaitaal, M.; Kato, N.; Yi, C.; Park, S.; Sato, M. H.; Schulze-Lefert, P.; Kwon, C.: Requirement of vesicle-associated membrane protein 721 and 722 for sustained growth during immune responses in Arabidopsis. Molecules and Cells 35 (6), pp. 481 - 488 (2013)

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2012

Journal Article

Bai, S.; Liu, J.; Chang, C.; Zhang, L.; Maekawa, T.; Wang, Q.; Xiao, W.; Liu, Y.; Chai, J.; Takken, F. L. W. et al.; Schulze-Lefert, P.; Shen, Q.-H.: Structure-Function Analysis of Barley NLR Immune Receptor MLA10 Reveals Its Cell Compartment Specific Activity in Cell Death and Disease Resistance. PLoS Pathogens 8 (6), doi:10.1371/journal.ppat.1002752 (2012)

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Bulgarelli, D.; Rott, M.; Schlaeppi, K.; Ver Loren van Themaat, E.; Ahmadinejad, N.; Assenza, F.; Rauf, P.; Huettel, B.; Reinhardt, R.; Schmelzer, E. et al.; Peplies, J.; Gloeckner, F. O.; Amann, R.; Eickhorst, T.; Schulze-Lefert, P.: Revealing structure and assembly cues for Arabidopsis root-inhabiting bacterial microbiota. NATURE 488 (7409), pp. 91 - 95 (2012)

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Delgado-Cerezo, M.; Sánchez-Rodríguez, C.; Escudero, V.; Miedes, E.; Virginia Fernánde, P.; Jordá, L.; Hernández-Blanco, C.; Sánchez-Vallet, A.; Bednarek, P.; Schulze-Lefert, P. et al.; Somerville, S.; Estevez, J. M.; Persson, S.; Molina, A.: Arabidopsis heterotrimeric G protein regulates cell wall-mediated resistance to necrotrophic fungi. Molecular Plant 5, pp. 98 - 114 (2012)

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Journal Article

Lebeis, S. L.; Rott, M.; Dangl, J. L.; Schulze-Lefert, P.: Culturing a plant microbiome community at the cross-Rhodes. New Phytologist 196 (2), pp. 341 - 344 (2012)

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Maekawa, T.; Kracher, B.; Vernaldi, S.; Ver Loren van Themaat, E.; Schulze-Lefert, P.: Conservation of NLR-triggered immunity across plant lineages. Proceedings of the National Academy of Sciences of the United States of America 109 (49), pp. 20119 - 20123 (2012)

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O'Connell, R. J.; Thon, M. R.; Hacquard, S.; Amyotte, S. G.; Kleemann, J.; Torres, M. F.; Damm, U.; Buiate, E. A.; Epstein, L.; Alkan, N. et al.; Altmueller, J.; Alvarado-Balderrama, L.; Bauser, C. A.; Becker, C.; Birren, B. W.; Chen, Z.; Choi, J.; Crouch, J. A.; Duvick, J. P.; Farman, M. A.; Gan, P.; Heiman, D.; Henrissat, B.; Howard, R. J.; Kabbage, M.; Koch, C.; Kracher, B.; Kubo, Y.; Law, A. D.; Lebrun, M.-H.; Lee, Y.-H.; Miyara, I.; Moore, N.; Neumann, U.; Nordstroem, K.; Panaccione, D. G.; Panstruga, R.; Place, M.; Proctor, R. H.; Prusky, D.; Rech, G.; Reinhardt, R.; Rollins, J. A.; Rounsley, S.; Schardl, C. L.; Schwartz, D. C.; Shenoy, N.; Shirasu, K.; Sikhakolli, U. R.; Stueber, K.; Sukno, S. A.; Sweigard, J. A.; Takano, Y.; Takahara, H.; Trail, F.; van der Does, H. C.; Voll, L. M.; Will, I.; Young, S.; Zeng, Q.; Zhang, J.; Zhou, S.; Dickman, M. B.; Schulze-Lefert, P.; Ver Loren van Themaat, E.; Ma, L.-J.; Vaillancourt, L. J.: Lifestyle transitions in plant pathogenic Colletotrichum fungi deciphered by genome and transcriptome analyses. Nature Genetics 44 (9), pp. 1060 - + (2012)

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Journal Article

Serrano, M.; Kanehara, K.; Torres, M.; Yamada, K.; Tintor, N.; Kombrink, E.; Schulze-Lefert, P.; Saijo, Y.: Repression of sucrose/ultraviolet-B light-induced flavonoid accumulation in microbe-associated molecular pattern-triggered immunity in Arabidopsis. Plant Physiology 158, pp. 408 - 422 (2012)

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Journal Article

Uemura, T.; Kim, H.; Saito, C.; Ebine, K.; Ueda, T.; Schulze-Lefert, P.; Nakano, A.: Qa-SNAREs localized to the trans-Golgi network regulate multiple transport pathways and extracellular disease resistance in plants. Proceedings of the National Academy of Sciences of the United States of America 109 (5), pp. 1784 - 1789 (2012)

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publisher-version

2011

Journal Article

Bednarek, P.; Pislewska-Bednarek, M.; Ver Loren van Themaat, E.; Maddula, R. K.; Svatoš, A, A.; Schulze-Lefert, P.: Conservation and clade-specific diversification of the pathogen-inducible tryptophan and indole glucosinolate metabolism in Arabidopsis thaliana relatives. New Phytologist 192, pp. 713 - 726 (2011)

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Journal Article

Hiruma, K.; Nishiuchi, T.; Kato, T.; Bednarek, P.; Okuno, T.; Schulze-Lefert, P.; Takano, Y.: Arabidopsis ENHANCED DISEASE RESISTANCE 1 is required for pathogen-induced expression of plant defensins in nonhost resistance, and acts through interference of MYC2-mediated repressor function. Plant Journal 67, DOI: 10.1111/j.1365-313X.2011.04651.x, pp. 980 - 992 (2011)

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Journal Article

Maekawa, T.; Cheng, W.; Spiridon, L. N.; Toeller, A.; Lukasik, E.; Saijo, Y.; Liu, P. Y.; Shen, Q. H.; Micluta, M. A.; Somssich, I. E. et al.; Takken, F. L. W.; Petrescu, A. J.; Chai, J.; Schulze-Lefert, P.: Coiled-Coil Domain-Dependent Homodimerization of Intracellular Barley Immune Receptors Defines a Minimal Functional Module for Triggering Cell Death. Cell Host & Microbe 9 (3), pp. 187 - 199 (2011)

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Journal Article

Maekawa, T.; Kufer, T. A.; Schulze-Lefert, P.: NLR functions in plant and animal immune systems: so far and yet so close. NATURE IMMUNOLOGY 12 (9), pp. 818 - 826 (2011)

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Schulze-Lefert, P.; Panstruga, R.: A molecular evolutionary concept connecting nonhost resistance, pathogen host range, and pathogen speciation. Trends in Plant Science 16, pp. 117 - 125 (2011)

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2010

Journal Article

Bednarek, P.; Kwon, C.; Schulze-Lefert, P.: Not a peripheral issue: secretion in plant–microbe interactions. Current Opinion in Plant Biology 13, doi:10.1016/j.pbi.2010.05.002, pp. 378 - 387 (2010)

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Journal Article

Bulgarelli, D.; Biselli, C.; Collins, N. C.; Consonni, G.; Stanca, A. M.; Schulze-Lefert, P.; Valè, G.: The CC-NB-LRR-Type Rdg2a Resistance Gene Confers Immunity to the Seed-Borne Barley Leaf Stripe Pathogen in the Absence of Hypersensitive Cell Death. PLoS ONE 5 (9), 10.1371/journal.pone.0012599 (2010)

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publisher-version

Journal Article

Christensen, A.; Svensson, K.; Thelin, L.; Zhang, W.; Tintor, N.; Prins, D.; Funke, N.; Michalak, M.; Schulze-Lefert, P.; Saijo, Y. et al.; Sommarin, M.; Widell, W.; Persson, P.: Higher plant calreticulins have acquired specialized functions in Arabidopsis. PLOS ONE 5(6), doi:10.1371/journal.pone.0011342, p. e11342 (2010)

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Journal Article

Hiruma, K.; Onozawa-Komori, M.; Takahashi, F.; Asakura, M.; Bednarek, P.; Okuno, T.; Schulze-Lefert, P.; Takano, Y.: Entry Mode–Dependent Function of an Indole Glucosinolate Pathway in Arabidopsis for Nonhost Resistance against Anthracnose Pathogens. Plant Cell 22, 10.1105/tpc.110.074344, pp. 2429 - 2443 (2010)

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Journal Article

Humphry, M.; Bednarek, P.; Kemmerling, B.; Koh, S.; Stein, M.; Goebel, U.; Stueber, K.; Pislewska-Bednarek, M.; Loraine, A.; Schulze-Lefert, P. et al.; Somerville, S.; Panstruga, R.: A regulon conserved in monocot and dicot plants defines a functional module in antifungal plant immunity. Proceedings of the National Academy of Sciences 107, pp. 21896 - 21901 (2010)

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Publications of P. Schulze-Lefert

Journal Article (159)