Scientific Publications since 2002

Scientific Publications since 2002

Journal Article (1588)

  1. Cui, H.; Gobbato, E.; Kracher, B.; Qiu, J.; Bautor, J.; Parker, J. E.: A core function of EDS1 with PAD4 is to protect the salicylic acid defense sector in Arabidopsis immunity. New Phytologist 213, 10.1111/nph.14302, pp. 1802 - 1817 (2017)
  2. Dombrowski, N.; Schlaeppi, K.; Agler, M.T.; Hacquard, S.; Kemen, E.; Garrido Oter, R.; Wunder, J.; Coupland, G.; Schulze-Lefert, P.: Root microbiota dynamics of perennial Arabis alpina are dependent on soil residence time but independent of flowering time. The ISME Journal 11, 10.1038/ismej.2016.109, pp. 43 - 55 (2017)
  3. Ejaz, M.; von Korff, M.: The genetic control of reproductive development under high ambient temperature. Plant Physiology 173 (1), pp. 294 - 306 (2017)
  4. Flood, P.; Hancock, A.: The genomic basis of adaptation in plants. Current Opinion in Plant Biology 36, pp. 88 - 94 (2017)
  5. Fukunaga, S.; Sogame, M.; Hata, M.; Singkaravanit-Ogawa, S.; Piślewska-Bednarek, M.; Onozawa-Komori, M.; Nishiuchi, T.; Hiruma, K.; Saitoh, H.; Terauchi, R. et al.; Kitakura, S.; Inoue, Y.; Bednarek, P.; Schulze-Lefert, P.; Takano, Y.: Dysfunction of Arabidopsis MACPF domain protein activates programmed cell death via tryptophan metabolism in MAMP-triggered immunity. The Plant Journal 89, pp. 381 - 393 (2017)
  6. Hacquard, S.: Commentary: Microbial Small Talk: Volatiles in Fungal-Bacterial Interactions. Frontiers in Microbiology (2017)
  7. Hayama, R.; Sarid-Krebs, L.; Richter, R.; Fernández, V.: PSEUDO RESPONSE REGULATORs stabilize CONSTANS protein to promote flowering in response to day length. EMBO Journal (2017)
  8. Horvath, M.; Steinbiss, H. H.; Reiss, B.: Gene Targeting Without DSB Induction Is Inefficient in Barley. Frontiers in Plant Science (2017)
  9. Hyun, Y.; Richter, R.; Coupland, G.: Competence to Flower: Age-Controlled Sensitivity to Environmental Cues. Plant Physiology 173 (1), pp. 36 - 46 (2017)
  10. Imprialou, M.; Kahles, A.; Steffen, J. G.; Osborne, E. J.; Gan, X.; Lempe, J.; Bhomra, A.; Belfield, E.; Visscher, A.; Greenhalgh, R. et al.; Harberd, N. P.; Goram, R.; Hein, J.; Robert-Seilaniantz, A.; Jones, J.; Stegle, O.; Kover, P.; Tsiantis, M.; Nordborg, M.; Rätsch , G.; Clark, R. M.; Mott, R.: Genomic Rearrangements in Arabidopsis Considered as Quantitative Traits. Genetics (2017)
  11. Jiao, W.-B.; Garcia Accinelli, G.; Hartwig, B.; Kiefer, C.; Baker, D.; Severing, E.; Willing, E.-M.; Piednoel, M.; Woetzel, S.; Madrid-Herrero, E. et al.; Huettel, B.; Hümann, U.; Reinhardt, R.; Koch, M. A.; Swan, D.; Clavijo, B.; Coupland, G.; Schneeberger, K.: Improving and correcting the contiguity of long-read genome assemblies of three plant species using optical mapping and chromosome conformation capture data. Genome Research (2017)
  12. Jiao, W.-B.; Schneeberger, K.: The impact of third generation genomic technologies on plant genome assembly. Current Opinion in Plant Biology 36, pp. 64 - 70 (2017)
  13. Jung, C.; Pillen, K.; Staiger, D.; Coupland, G.; von Korff, M.: Editorial: Recent Advances in Flowering Time Control. Frontiers in Plant Science (2017)
  14. Kiefer, C.; Severing, E.; Karl, R.; Bergonzi, S.; Koch, M.; Tresch, A.; Coupland, G.: Divergence of annual and perennial species in the Brassicaceae and the contribution of cis-acting variation at FLC orthologues. Molecular Ecology (2017)
  15. Kroll, S.; Agler, M.T.; Kemen, E.: Genomic dissection of host–microbe and microbe–microbe interactions for advanced plant breeding. Current Opinion in Plant Biology 36, pp. 71 - 78 (2017)
  16. Liller, C.; Walla, A.; Boer, M. P.; Hedley, P.; Macaulay, M.; Effgen, S.; von Korff, M.: Fine mapping of a major QTL for awn length in barley using a multiparent mapping population. Theoretical and Applied Genetics 130 (2), pp. 269 - 281 (2017)
  17. Martinez, C. C.; Chitwood, D. H.; Smith, R. S.; Sinha, N. R.: Left-right leaf asymmetry in decussate and distichous phyllotactic systems. Philosophical Transactions of the Royal Society B: Biological Sciences 371, 20150412 (2017)
  18. Merini, W.; Romero-Campero, F. J.; Gomez-Zambrano, A.; Zhou, Y.; Turck, F.; Calonje, M.: The Arabidopsis Polycomb Repressive Complex 1 (PRC1) components AtBMI1A, B and C impact gene networks throughout all stages of plant development. Plant Physiology 173, pp. 627 - 641 (2017)
  19. Mine, A.; Nobori, T.; Salazar-Rondon, M. C.; Winkelmüller, T. M.; Anver, S.; Becker, D.; Tsuda, K.: An incoherent feed-forward loop mediates robustness and tunability in a plant immune network. EMBO Reports (2017)
  20. Monniaux, M.; McKim, S. M.; Cartolano, M.; Thévenon, E.; Parcy, F.; Tsiantis, M.; Hay, A.: Conservation vs divergence in LEAFY and APETALA1 functions between Arabidopsis thaliana and Cardamine hirsuta. New Phytologist (2017)
  21. Nakano, R. T.; Piślewska-Bednarek, M.; Yamada, K.; Edger , P. P.; Miyahara, M.; Kondo, M.; Böttcher, C.; Mori, M.; Nishimura, M.; Schulze-Lefert, P. et al.; Hara-Nishimura, I.; Bednarek, P.: PYK10 myrosinase reveals a functional coordination between endoplasmic reticulum bodies and glucosinolates in Arabidopsis thaliana. The Plant Journal 89 (2), pp. 201 - 220 (2017)
  22. Nikolov, L. A.; Tsiantis, M.: Using mustard genomes to explore the genetic basis of evolutionary change. Current Opinion in Plant Biology (2017)
  23. Née, G.; Xiang, Y.; Soppe, W.: The release of dormancy, a wake-up call for seeds to germinate. Current Opinion in Plant Biology, Special Issue: Growth and development SI: 35, pp. 8 - 14 (2017)
  24. Pankin, A.; von Korff, M.: Co-evolution of methods and thoughts in cereal domestication studies: a tale of barley (Hordeum vulgare). Current Opinion in Plant Biology 36, pp. 15 - 21 (2017)
  25. Rishmawi, L.; Bühler, J.; Jaegle, B.; Hülskamp, M.; Koornneef, M.: Quantitative trait loci controlling leaf venation in Arabidopsis. Plant, Cell and Environment (2017)
  26. Runions, A.; Tsiantis, M.; Prusinkiewicz, P.: A common developmental program can produce diverse leaf shapes. New Phytologist (2017)
  27. Rymen, B.; Kawamura, A.; Schaefer, S.; Breuer, C.; Iwase, A.; Shibata, M.; Ikeda, M.; Mitsuda, N.; Koncz, C.; Ohme-Takagi, M. et al.; Matsui, M.; Sugimoto, K.: ABA suppresses root hair growth via OBP4 transcriptional-regulator repression of the RSL2 promoter. Plant Physiology (2017)
  28. Shin, J.; Sánchez-Villarreal, A.; Davis, A. M.; Du, S. X.; Berendzen, K. W.; Koncz, C.; Ding, Z.; Li, C.; Davis, S. J.: The metabolic sensor AKIN10 modulates the Arabidopsis circadian clock in a light-dependent manner. Plant, Cell and Environment (2017)
  29. Templer, S. E.; Ammon, A.; Pscheidt, D.; Ciobotea, O.; Schuy, C.; McCollum, C.; Sonnewald, U.; Hanemann, A.; Förster, J.; Ordon, F. et al.; von Korff, M.; Voll, L. M.: Metabolite profiling of barley flag leaves under drought and combined heat and drought stress reveals metabolic QTLs for metabolites associated with antioxidant defense. Journal of Experimental Botany (2017)
  30. Adibi, M.; Yoshida, S.; Weijers, D.; Fleck, C.: Centering the Organizing Center in the Arabidopsis thaliana Shoot Apical Meristem by a Combination of Cytokinin Signaling and Self-Organization. PLOS ONE (2016)
  31. Agler, M.T.; Ruhe, J.; Kroll, S.; Morhenn, C.; Kim, S.-T.; Weigel, D.; Kemen, E.: Microbial Hub Taxa Link Host and Abiotic Factors to Plant Microbiome Variation. PLoS Biology (2016)
  32. Alles, J.; Menegatti, J.; Motsch, N.; Hart, M.; Reinhardt, R.; Eichner, N.; Meister, G.; Grässer, F. A.: miRNA expression profiling of Epstein-Barr virus-associated NKTL cell lines by Illumina deep sequencing. Febs Open Bio (2016)
  33. Alonso-Blanco, C.; Andrade, J.; Becker, C.; Bemm, F.; Bergelson, J.; Borgwardt, K. M.; Cao, J.; Chae, E.; Dezwaan, T. M.; Ding, W. et al.; Ecker, J. R.; Exposito-Alonso, M.; Farlow, A.; Fitz, J.; Gan, X.; Grimm, D. G.; Hancock, A. M.; Henz, S. R.; Holm, S.; Horton, M.; Jarsulic, M.; Kerstetter, R. A.; Korte, A.; Korte, P.; Lanz, C.; Lee, C.-R.; Meng, D.; Michael, T. P.; Mott, R.; Muliyati, N.W.; Nägele, T.; Nagler, M.; Nizhynska, V.; Nordborg, M.; Novikova, P. Y.; Picó, F. X.; Platzer, A.; Rabanal, F. A.; Rodriguez, A.; Rowan, B. A.; Salomé, P. A.; Schmid, K. J.; Schmitz, R. J.; Seren, Ü.; Sperone, F. G.; Sudkamp, M.; Svardal, H.; Tanzer, M. M.; Todd, D.; Volchenboum, S. L.; Wang, C.; Wang, G.; Wang, X.; Weckwerth, W.; Weigel, D.; Zhou, X.: 1,135 Genomes Reveal the Global Pattern of Polymorphism in Arabidopsis thaliana. Cell 166, pp. 481 - 491 (2016)
  34. Alves, R. N.; Gomes, A. S.; Stueber, K.; Tine, M.; Thorne, M. A. S.; Smaradottir, H.; Reinhardt, R.; Clark, M. S.; Ronnestad, I.; Power, D. M.: The transcriptome of metamorphosing flatfish. BMC Genomics (2016)
  35. Azevedo, H.; Azinheiro, S. G.; Munoz-Merida, A.; Castro, P. H.; Huettel, B.; Aarts, M. G. M.; Assuncao, A. G. L.: Transcriptomic profiling of Arabidopsis gene expression in response to varying micronutrient zinc supply. GENOMICS DATA 7, pp. 256 - 258 (2016)
  36. Bar, M.; Israeli, A.; Levy, M.; Ben Gera, H.; Jimenez-Gomez, J. M.; Kouril, S.; Tarkowski, P.; Ori, N.: CLAUSA Is a MYB Transcription Factor That Promotes Leaf Differentiation by Attenuating Cytokinin Signaling. Plant Cell 28 (7), pp. 1602 - 1615 (2016)
  37. Baroux, C.; Pecinka, A.; Fuchs, J.; Kreth, G.; Schubert, I.; Grossniklaus, U.: Non-random chromosome arrangement in triploid endosperm nuclei. Chromosoma : Biology of the Nucleus (2016)
  38. Bassel, G. W.; Smith, R. S.: Quantifying morphogenesis in plants in 4D. Current Opinion in Plant Biology 29, pp. 87 - 94 (2016)
  39. Beil-Wagner, J.; Doessinger, G.; Schober, K.; vom Berg, J.; Tresch, A.; Grandl, M.; Palle, P.; Mair, F.; Gerhard, M.; Becher, B. et al.; Busch, D. H.; Buch, T.: T cell-specific inactivation of mouse CD2 by CRISPR/Cas9. Scientific Reports (2016)
  40. Bewick, A.; Ji, L.; Niederhuth, C.; Willing, E.-M.; Hofmeister, B. T.; Shi, X.; Wang, L.; Lu, Z.; Rohr, N.; Hartwig, B. et al.; Kiefer, C.; Deal, R. B.; Schmutz, J.; Grimwood, J.; Stroud, H.; Jacobsen, S. E.; Schneeberger, K.; Zhang, X.; Schmitz, R. J.: On the origin and evolutionary consequences of gene body DNA methylation. Proceedings of the National Academy of Sciences of the United States of America 113 (32), pp. 9111 - 9116 (2016)
  41. Birkenbihl, R.; Kracher, B.; Somssich, I. E.: Induced genome-wide binding of three WRKY transcription factors during early MAMP-triggered immunity. The Plant Cell (2016)
  42. Blättner, S.; Das, S.; Paprotka, K.; Eilers, U.; Krischke, M.; Kretschmer, D.; Remmele, C.W.; Dittrich, M.; Müller, T.; Schuelein-Voelk, C. et al.; Hertlein, T.; Huettel, B.; Reinhardt, R.; Ohlsen, K.; Rudel, T.; Fraunholz, M.J.: Staphylococcus aureus Exploits a Non-ribosomal Cyclic Dipeptide to Modulate Survival within Epithelial Cells and Phagocytes. PLoS Pathogens (2016)
  43. Cao, D.; Xu, H.; Zhao, Y.; Deng, X.; Liu, Y.; Soppe, W.; Lin, J.: ranscriptome and degradome sequencing reveals dormancy mechanisms of Cunninghamia lanceolate seeds. Plant Physiology (2016)
  44. Cartolano, M.; Huettel, B.; Hartwig, B.; Reinhardt, R.; Schneeberger, K.: cDNA Library Enrichment of Full Length Transcripts for SMRT Long Read Sequencing. PLoS One 11 (6), e0157779 (2016)
  45. Chandrasekar, B.; Van der Hoorn, R. A. L.: Beta galactosidases in Arabidopsis and tomato - a mini review. Biochemical Society Transactions (London) 44, pp. 150 - 158 (2016)
  46. Clarke, W. E.; Higgins, E. E.; Plieske, J.; Wieseke, R.; Sidebottom, C.; Khedikar, Y.; Batley, J.; Edwards, D.; Meng, J.; Li, R. et al.; Lawley, C. T.; Pauquet, J.; Laga, B.; Cheung, W.; Iniguez-Luy, F.; Dyrszka, E.; Rae, S.; Stich, B.; Snowdon, R.J.; Sharpe, A.G.; Ganal, M. W.; Parkin, I. A. P.: A high-density SNP genotyping array for Brassica napus and its ancestral diploid species based on optimised selection of single-locus markers in the allotetraploid genome. Theoretical and Applied Genetics 129 (10), pp. 1887 - 1899 (2016)
  47. Couto, D.; Niebergall, R.; Liang, X.; Bucherl, C. A.; Sklenar, J.; Macho, A. P.; Ntoukakis, V.; Derbyshire, P.; Altenbach, D.; Maclean, D. et al.; Robatzek, S.; Uhrig, J.; Menke, F.; Zhou, J.-M.; Zipfel, C.: The Arabidopsis Protein Phosphatase PP2C38 Negatively Regulates the Central Immune Kinase BIK1. PLoS Pathogens (2016)
  48. Das, S.; Lindemann, C.; Young, B.C.; Muller, J.; Österreich, B.; Ternette, N.; Winkler, A.-C.; Paprotka, K.; Reinhardt, R.; Förstner, K.U. et al.; Allen, E.; Flaxman, A.; Yamaguchi, Y.; Rollier, C.S.; Diemen, P.V.; Blättner, S.; Remmele, C.W.; Selle, M.; Dittrich, M.; Müller, T.; Vogel, J.; Ohlsen, K.; Crook, D.W.; Massey, R.; Wilson, D.J.; Rudel, T.; Wyllie, D.H.; Fraunholz, M.J.: Natural mutations in a Staphylococcus aureus virulence regulator attenuate cytotoxicity but permit bacteremia and abscess formation. Proceedings of the National Academy of Sciences of the United States of America 113 (22), pp. E3101 - E3110 (2016)
  49. Digel, B.; Tavakol, E.; Verderio, G.; Tondelli, A.; Xu, X.; Cattivelli, L.; Rossini, L.; von Korff, M.: Photoperiod-H1 (Ppd-H1) Controls Leaf Size. Plant Physiology 172, pp. 405 - 415 (2016)
  50. Dose, A.; Sindlinger, J.; Bierlmeier, J.; Bakirbas, A.; Schulze-Osthoff, K.; Einsele-Scholz, S.; Hartl, M.; Essmann, F.; Finkemeier, I.; Schwarzer, D.: Interrogating Substrate Selectivity and Composition of Endogenous Histone Deacetylase Complexes with Chemical Probes. ANGEWANDTE CHEMIE-INTERNATIONAL EDITION 55 (3), pp. 1192 - 1195 (2016)
 
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