MorphoDynamX is the next generation of the MorphoGraphX software that is based on a a data structure called Cell Complexes that are ideal for modeling subdividing geometry in 2 and 3 dimensions. MorphoDynamX integrated image processing with simulation modeling, and allows models to run directly on templates extracted from imaging data.

Simulation of phyllotaxis on a shoot apex using a Meinhardt activator-inhibitor system. The simulation combines a molecular network, cell-cell signaling, growth and cell division. As the apex grow, space opens up at the tip for a new leaf to form. Green represents the concentration of the activator.
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