MPIPZ Scientific Publications since 2002

Journal Article (118)

Journal Article
Acevedo-Garcia, J.; Gruner, K.; Reinstaedler, A.; Kemen, A.; Kemen, E.; Cao, L.; Takken, F. L. W.; Reitz, M. U.; Schafer, P.; O'Connell, R. J. et al.; Kusch, S.; Kuhn, H.; Panstruga, R.: The powdery mildew-resistant Arabidopsis mlo2 mlo6 mlo12 triple mutant displays altered infection phenotypes with diverse types of phytopathogens. SCIENTIFIC REPORTS 7, 9319 (2017)
Journal Article
Adeyemo, S.; Chavarriaga, P.; Tohme, J.; Fregene, M.; Davis, S. J.; Setter, T. L.: Overexpression of Arabidopsis FLOWERING LOCUS T (FT) gene improves floral development in cassava (Manihot esculenta, Crantz). PLoS One 12 (7), e0181460 (2017)
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Almario, J.; Jeena, G.; Wunder, J.; Langen, G.; Zuccaro, A.; Coupland, G.; Bucher, M.: Root-associated fungal microbiota of nonmycorrhizal Arabis alpina and its contribution to plant phosphorus nutrition. Proceedings of the National Academy of Sciences of the United States of America 114 (44), pp. E9403 - E9412 (2017)
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Alvarez, M. F.; Angarita, M.; Delgado, M. C.; Garcia, C.; Jimenez-Gomez, J. M.; Gebhardt, C.; Mosquera, T.: Identification of Novel Associations of Candidate Genes with Resistance to Late Blight in Solanum tuberosum Group Phureja. Frontiers in Plant Science 8, 1040 (2017)
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Ariga, H.; Katori, T.; Tsuchimatsu, T.; Hirase, T.; Tajima, Y.; Parker, J. E.; Alcázar, R.; Koornneef, M.; Hoekenga, O.; Lipka, A. E. et al.; Gore, M. A.; Sakakibara, H.; Kojima, M.; Kobayashi, Y.; Iuchi, S.; Kobayashi, M.; Shinozaki, K.; Sakata, Y.; Hayashi, T.; Saijo, Y.; Taji, T.: NLR locus-mediated trade-off between abiotic and biotic stress adaptation in Arabidopsis. Nature Plants 3, 17072 (2017)
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Balcke, G. U.; Bennewitz, S.; Bergau, N.; Athmer, B.; Henning, A.; Majovsky, P.; Jimenez-Gomez, J. M.; Hoehenwarter, W.; Tissier, A.: Multi-Omics of Tomato Glandular Trichomes Reveals Distinct Features of Central Carbon Metabolism Supporting High Productivity of Specialized Metabolites. Plant Cell 29 (5), pp. 960 - 983 (2017)
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Baroux, C.; Pecinka, A.; Fuchs, J.; Kreth, G.; Schubert, I.; Grossniklaus, U.: Non-random chromosome arrangement in triploid endosperm nuclei. Chromosoma: Biology of the Nucleus, 10.1007/s00412-016-0578-5 (2017)
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Berens, M.; Berry, H. M.; Mine, A.; Argueso, C. T.; Tsuda, K.: Evolution of Hormone Signaling Networks in Plant Defense. ANNUAL REVIEW OF PHYTOPATHOLOGY, VOL 55, pp. 401 - 425 (2017)
Journal Article
Birkenbihl, R.; Kracher, B.; Roccaro, M.; Somssich, I. E.: Induced genome-wide binding of three WRKY transcription factors during early MAMP-triggered immunity. The Plant Cell 29, 10.1105/tpc.16.00681, pp. 20 - 38 (2017)
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Birkenbihl, R.; Liu, S.; Somssich, I. E.: Transcriptional events defining plant immune responses. Current Opinion in Plant Biology 38 (SI: 38 Biotic Interactions 2017), pp. 1 - 9 (2017)
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Bowman, J. L.; Kohchi, T.; Yamato, K. T.; Jenkins, J.; Shu, S.; Ishizaki, K.; Yamaoka, S.; Nishihama, R.; Nakamura, Y.; Berger, F. et al.; Adam, C.; Aki, S. S.; Althoff, F.; Araki, T.; Arteaga-Vazquez, M. A.; Balasubrmanian, S.; Barry, K.; Bauer, D.; Boehm, C. R.; Briginshaw, L.; Caballero-Perez, J.; Catarino, B.; Chen, F.; Chiyoda, S.; Chovatia, M.; Davies, K. M.; Delmans, M.; Demura, T.; Dierschke, T.; Dolan, L.; Dorantes-Acosta, A. E.; Eklund, D. M.; Florent, S. N.; Flores-Sandoval, E.; Fujiyama, A.; Fukuzawa, H.; Galik, B.; Grimanelli, D.; Grimwood, J.; Grossniklaus, U.; Hamada, T.; Haseloff, J.; Hetherington, A. J.; Higo, A.; Hirakawa, Y.; Hundley, H. N.; Ikeda, Y.; Inoue, K.; Inoue, S.-I.; Ishida, S.; Jia, Q.; Kakita, M.; Kanazawa, T.; Kawai, Y.; Kawashima, T.; Kennedy, M.; Kinose, K.; Kinoshita, T.; Kohara, Y.; Koide, E.; Komatsu, K.; Kopischke, S.; Kubo, M.; Kyozuka, J.; Lagercrantz, U.; Lin, S.-S.; Lindquist, E.; Lipzen, A. M.; Lu, C.-W.; De Luna, E.; Martienssen, R.A.; Minamino, N.; Mizutani, M.; Mizutani, M.; Mochizuki, N.; Monte, I.; Mosher, R.; Nagasaki, H.; Nakagami, H.; Naramoto, S.; Nishitani, K.; Ohtani, M.; Okamoto, T.; Okumura, M.; Phillips, J.; Pollak, B.; Reinders, A.; Rovekamp, M.; Sano, R.; Sawa, S.; Schmid, M. W.; Shirakawa, M.; Solano, R.; Spunde, A.; Suetsugu, N.; Sugano, S.; Sugiyama, A.; Sun, R.; Suzuki, Y.; Takenaka, M.; Takezawa, D.; Tomogane, H.; Tsuzuki, M.; Ueda, T.; Umeda, M.; Ward, J. M.; Watanabe, Y.; Yazaki, K...; Yokoyama, R.; Yoshitake, Y.; Yotsui, I.; Zachgo, S.; Schmutz, J.: Insights into Land Plant Evolution Garnered from the Marchantia polymorpha Genome. Cell 171 (2), pp. 287 - 304.e15 (2017)
Journal Article
Chandrasekar, B.; Tram Hong, N.; Van der Hoorn, R. A. L.: Inhibitor Discovery by Convolution ABPP. ACTIVITY-BASED PROTEOMICS: METHODS AND PROTOCOLS, pp. 47 - 56 (2017)
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Chao, Y.; Li, L.; Girodat, D.; Foerstner, K. U.; Said, N.; Corcoran, C.; Smiga, M.; Papenfort, K.; Reinhardt, R.; Wieden, H.-J. et al.; Luisi, B. F.; Vogel, J.: In Vivo Cleavage Map Illuminates the Central Role of RNase E in Coding and Non-coding RNA Pathways. Molecular Cell 65 (1), pp. 39 - 51 (2017)
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Costa, M.-C. D.; Artur, M. A. S.; Maia, J.; Jonkheer, E.; Derks, M. F. L.; Nijveen, H.; Williams, B.; Mundree, S. G.; Jimenez-Gomez, J. M.; Hesselink, T. et al.; Schijlen, E. G. W. M.; Ligterink, W.; Oliver, M. J.; Farrant, J. M.; Hilhorst, H. W. M.: A footprint of desiccation tolerance in the genome of Xerophyiita viscosa. Nature Plants 3 (4), 17038 (2017)
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Cui, H.; Gobbato, E.; Kracher, B.; Qiu, J.; Bautor, J.; Parker, J. E.: A core function of EDS1 with PAD4 is to protect the salicylic acid defense sector in Arabidopsis immunity. New Phytologist 213, 10.1111/nph.14302, pp. 1802 - 1817 (2017)
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de Montaigu, A.; Coupland, G.: The timing of GIGANTEA expression during day/ night cycles varies with the geographical origin of Arabidopsis. Plant Signaling & Behavior 12 (7), e1342026 (2017)
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de Montaigu, A.; Oeljeklaus, J.; Krahn, J. H.; Suliman, M. N. S.; Halder, V.; De Ansorena, E.; Nickel, S.; Schlich, M.; Plihal, O.; Kubiasová, K. et al.; Radova, L.; Kracher, B.; Tóth, R.; Kaschani, F.; Coupland, G.; Kombrink, E.; Kaiser, M.: The Root Growth-Regulating Brevicompanine Natural Products Modulate the Plant Circadian Clock. ACS Chemical Biology 12 (6), pp. 1466 - 1471 (2017)
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de Simone, A.; Hubbard, R.; Vinegra de la Torre, N.; Velappan, Y.; Wilson, M.; Considine, M. J.; Soppe, W. J. J.; Foyer, C. H.: Redox Changes During the Cell Cycle in the Embryonic Root Meristem of Arabidopsis thaliana. ANTIOXIDANTS & REDOX SIGNALING 27 (18), pp. 1505 - 1519 (2017)
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Diaz, M.; Pecinka, A.: Seeds as Emerging Hotspot for Maintenance of Genome Stability. CYTOLOGIA 82 (5), pp. 467 - 470 (2017)
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Dombrowski, N.; Schlaeppi, K.; Agler, M.T.; Hacquard, S.; Kemen, E.; Garrido Oter, R.; Wunder, J.; Coupland, G.; Schulze-Lefert, P.: Root microbiota dynamics of perennial Arabis alpina are dependent on soil residence time but independent of flowering time. The ISME Journal 11, 10.1038/ismej.2016.109, pp. 43 - 55 (2017)
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Donnart, T.; Piednoel, M.; Higuet, D.; Bonnivard, E.: Filamentous ascomycete genomes provide insights into Copia retrotransposon diversity in fungi. BMC Genomics 18, 410 (2017)
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Duarte-Delgado, D.; Juyo, D.; Gebhardt, C.; Sarmiento, F.; Mosquera-Vasquez, T.: Novel SNP markers in InvGE and SssI genes are associated with natural variation of sugar contents and frying color in Solanum tuberosum Group Phureja. BMC Medical Genetics 18, 23 (2017)
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Durvasula, A.; Fulgione, A.; Gutaker, R. M.; Alacakaptan, S. I.; Flood, P. J.; Neto, C.; Tsuchimatsu, T.; Burbano, H. A.; Xavier Pico, F.; Alonso-Blanco, C. et al.; Hancock, A. M.: African genomes illuminate the early history and transition to selfing in Arabidopsis thaliana. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 114 (20), pp. 5213 - 5218 (2017)
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Ejaz, M.; von Korff, M.: The genetic control of reproductive development under high ambient temperature. Plant Physiology 173 (1), pp. 294 - 306 (2017)
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Flood, P.; Hancock, A.: The genomic basis of adaptation in plants. Current Opinion in Plant Biology 36, pp. 88 - 94 (2017)
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Frantzeskakis, L.; Courville, K. J.; Pluecker, L.; Kellner, R.; Kruse, J.; Brachmann, A.; Feldbrügge, M.; Göhre, V.: The plant-dependent life cycle of Thecaphora thlaspeos: a smut fungus adapted to Brassicaceae. Molecular Plant-Microbe Interactions 30 (4), pp. 271 - 282 (2017)
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Franzen, K.; Fliegen, S.; Koester, J.; Campos Martin, R.; Deutschl, G.; Reppel, M.; Mortensen, K.; Schneider , S. A.: Central hemodynamics and arterial stiffness in idiopathic and multiple system atrophy. Journal of Neurology 264 (2), pp. 327 - 332 (2017)
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Friede, A.; Zhang, B.; Herberth, S.; Pesch, M.; Schrader, A.; Hülskamp, M.: The Second Intron Is Essential for the Transcriptional Control of the Arabidopsis thaliana GLABRA3 Gene in Leaves. Frontiers in Plant Science 8, 1382 (2017)
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Fukunaga, S.; Sogame, M.; Hata, M.; Singkaravanit-Ogawa, S.; Piślewska-Bednarek, M.; Onozawa-Komori, M.; Nishiuchi, T.; Hiruma, K.; Saitoh, H.; Terauchi, R. et al.; Kitakura, S.; Inoue, Y.; Bednarek, P.; Schulze-Lefert, P.; Takano, Y.: Dysfunction of Arabidopsis MACPF domain protein activates programmed cell death via tryptophan metabolism in MAMP-triggered immunity. The Plant Journal 89, pp. 381 - 393 (2017)
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Furlan, G.; Nakagami, H.; Eschen-Lippold, L.; Jiang, X.; Majovsky, P.; Kowarschik, K.; Hoehenwarter, W.; Lee, J.; Trujillo, M.: Changes in PUB22 Ubiquitination Modes Triggered by MITOGEN-ACTIVATED PROTEIN KINASE3 Dampen the Immune Response. The Plant Cell 29 (4), pp. 726 - 745 (2017)
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Gol, L.; Tomé, F.; von Korff, M.: Floral transitions in wheat and barley: interactions between photoperiod, abiotic stresses and nutrient status. Journal of Experimental Botany 68 (7), pp. 1399 - 1410 (2017)
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Hacquard, S.: Commentary: Microbial Small Talk: Volatiles in Fungal-Bacterial Interactions. Frontiers in Microbiology 8, 1 (2017)
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Hacquard, S.; Spaepen, S.; Garrido-Oter, R.; Schulze-Lefert, P.: Interplay Between Innate Immunity and the Plant Microbiota. Annual Review of Phytopathology (55), pp. 565 - 589 (2017)
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Hartl, M.; Fuessl, M.; Boersema, P. J.; Jost, J.-O.; Kramer, K.; Bakirbas, A.; Sindlinger, J.; Ploechinger, M.; Leister, D.; Uhrig, G. et al.; Moorhead, G. B. G.; Cox, J.; Salvucci, M. E.; Schwarzer, D.; Mann, M.; Finkemeier, I.: Lysine acetylome profiling uncovers novel histone deacetylase substrate proteins in Arabidopsis. Molecular Systems Biology 13 (10), 949 (2017)
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Hayama, R.; Sarid-Krebs, L.; Richter, R.; Fernández, V.: PSEUDO RESPONSE REGULATORs stabilize CONSTANS protein to promote flowering in response to day length. EMBO Journal 36 (7), pp. 904 - 918 (2017)
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Hervieux, N.; Tsugawa, S.; Fruleux, A.; Dumond, M.; Routier-Kierzkowska, A.-L.; Komatsuzaki, T.; Boudaoud, A.; Larkin, J. C.; Smith, R. S.; Li, C.-B. et al.; Hamant, O.: Mechanical Shielding of Rapidly Growing Cells Buffers Growth Heterogeneity and Contributes to Organ Shape Reproducibility. Current Biology 27 (22), pp. 3468 - 3479.e4 (2017)
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Hillmer, R. A.; Tsuda, K.; Rallapalli, G.; Asai, S.; Truman, W.; Papke, M. D.; Sakakibara, H.; Jones, J. D. G.; Myers, C. L.; Katagiri, F.: The highly buffered Arabidopsis immune signaling network conceals the functions of its components. PLoS Genetics 13 (5), e1006639 (2017)
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Hofhuis, H.; Hay, A.: Explosive seed dispersal. New Phytologist 216, 10.1111/nph.14541, pp. 339 - 342 (2017)
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Horvath, M.; Steinbiss, H. H.; Reiss, B.: Gene Targeting Without DSB Induction Is Inefficient in Barley. Frontiers in Plant Science 7, 1973 (2017)
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Hughes, P. W.: Between semelparity and iteroparity: Empirical evidence for a continuum of modes of parity. Ecology and Evolution 7 (20), pp. 8232 - 8261 (2017)
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Huot, B.; Castroverde, C. D. M.; Velasquez, A. C.; Hubbard, E.; Pulman, J. A.; Yao, J.; Childs, K. L.; Tsuda, K.; Montgomery, B. L.; He, S. Y.: Dual impact of elevated temperature on plant defence and bacterial virulence in Arabidopsis. Nature Communications 8, 1808 (2017)
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Hyun, Y.; Richter, R.; Coupland, G.: Competence to Flower: Age-Controlled Sensitivity to Environmental Cues. Plant Physiology 173 (1), pp. 36 - 46 (2017)
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Imprialou, M.; Kahles, A.; Steffen, J. G.; Osborne, E. J.; Gan, X.; Lempe, J.; Bhomra, A.; Belfield, E.; Visscher, A.; Greenhalgh, R. et al.; Harberd, N. P.; Goram, R.; Hein, J.; Robert-Seilaniantz, A.; Jones, J.; Stegle, O.; Kover, P.; Tsiantis, M.; Nordborg, M.; Rätsch , G.; Clark, R. M.; Mott, R.: Genomic Rearrangements in Arabidopsis Considered as Quantitative Traits. Genetics 205 (4), pp. 1425 - 1441 (2017)
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Jiao, W.-B.; Garcia Accinelli, G.; Hartwig, B.; Kiefer, C.; Baker, D.; Severing, E.; Willing, E.-M.; Piednoel, M.; Woetzel, S.; Madrid-Herrero, E. et al.; Huettel, B.; Huemann, U.; Reinhardt, R.; Koch, M. A.; Swan, D.; Clavijo, B.; Coupland, G.; Schneeberger, K.: Improving and correcting the contiguity of long-read genome assemblies of three plant species using optical mapping and chromosome conformation capture data. Genome Research 27 (5), pp. 778 - 786 (2017)
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Jiao, W.-B.; Schneeberger, K.: The impact of third generation genomic technologies on plant genome assembly. Current Opinion in Plant Biology 36, pp. 64 - 70 (2017)
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Jones, A.; Forero-Vargas, M.; Withers, S. P.; Smith, R. S.; Traas, J.; Dewitte, W.; Murray, J. A. H.: Cell-size dependent progression of the cell cycle creates homeostasis and flexibility of plant cell size. Nature Communications 8, 15060 (2017)
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Jung, C.; Pillen, K.; Staiger, D.; Coupland, G.; von Korff, M.: Editorial: Recent Advances in Flowering Time Control. Frontiers in Plant Science 7, 2011 (2017)
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Kiefer, C.; Severing, E.; Karl, R.; Bergonzi, S.; Koch, M.; Tresch, A.; Coupland, G.: Divergence of annual and perennial species in the Brassicaceae and the contribution of cis-acting variation at FLC orthologues. Molecular Ecology 26, pp. 3437 - 3457 (2017)
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Kirschner, G. K.; Stahl, Y.; von Korff, M.; Simon, R.: Unique and Conserved Features of the Barley Root Meristem. Frontiers in Plant Science 8, 1240 (2017)
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Kovacs, J.; Poor, P.; Kaschani, F.; Chandrasekar, B.; Hong, T. N.; Misas-Villamil, J. C.; Xin, B. T.; Kaiser, M.; Overkleeft, H. S.; Tari, I. et al.; Van der Hoorn, R. A. L.: Proteasome Activity Profiling Uncovers Alteration of Catalytic beta 2 and beta 5 Subunits of the Stress-Induced Proteasome during Salinity Stress in Tomato Roots. Frontiers in Plant Science 8, 107 (2017)
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