MPIPZ Scientific Publications since 2002

Journal Article (101)

Journal Article
Curated genome annotation of Oryza sativa ssp. japonica and comparative genome analysis with Arabidopsis thaliana. Genome Research 17 (2), pp. 175 - 183 (2007)
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Ballvora, A.; Joecker, A.; Viehoever, P.; Ishihara, H.; Paal, J.; Meksem, K.; Bruggmann, R.; Schoof, H.; Weisshaar, B.; Gebhardt, C.: Comparative sequence analysis of Solanum and Arabidopsis in a hot spot for pathogen resistance on potato chromosome V reveals a patchwork of conserved and rapidly evolving genome segments. BMC Genomics 8, doi:10.1186/1471-2164-8-112, p. 112 (2007)
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Bellin, D.; Schulz, B.; Rosleff Soerensen, T.; Salamini, F.; Schneider, K.: Transcript profiles at different growth stages and tap-root zones identify correlated developmental and metabolic pathways of sugar beet. Journal of Experimental Botany 58 (3), pp. 699 - 715 (2007)
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Berger, B.; Stracke, R.; Yatusevich, R.; Weisshaar, B.; Flügge, U.-I.; Gigolashvili, T.: A simplified method for the analysis of transcription factor–promoter interactions that allows high‐throughput data generation. The Plant Journal 50, pp. 911 - 916 (2007)
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Bessire, M.; Chassot, C.; Jacquat, A. C.; Humphry, M.; Borel, S.; Petetot, J. M. C.; Metraux, J. P.; Nawrath, C.: A permeable cuticle in Arabidopsis leads to a strong resistance to Botrytis cinerea. EMBO Journal 26 (8), pp. 2158 - 2168 (2007)
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Bird, D.; Beisson, F.; Brigham, A.; Shin, J.; Greer, S.; Jetter, R.; Kunst, L.; Wu, X. W.; Yephremov, A.; Samuels, L.: Characterization of Arabidopsis ABCG11/WBC11, an ATP binding cassette (ABC) transporter that is required for cuticular lipid secretion. Plant Journal 52 (3), pp. 485 - 498 (2007)
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Bittel, P.; Robatzek, S.: Microbe-associated molecular patterns (MAMPs) probe plant immunity. Current Opinion in Plant Biology 10, pp. 335 - 341 (2007)
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Böhmer, M.; Colby, T.; Böhmer, C.; Bräutigam, A.; Schmidt, J.; Bölker, M.: Proteomic analysis of dimorphic transition in the phytopathogenic fungus Ustilago maydis. Proteomics 7 (6), pp. 675 - 685 (2007)
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Böhmer, M.; Romeis, T.: A chemical-genetic approach to elucidate protein kinase function in planta. Plant Molecular Biology 65 (6), pp. 817 - 827 (2007)
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Busch, A.; Zachgo, S.: Control of corolla monosymmetry in the Brassicaceae Iberis amara. Proceedings of the National Academy of Sciences of the United States of America 104 (42), pp. 16714 - 16719 (2007)
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Cartolano, M.; Castillo, R.; Efremova, N.; Kuckenberg, M.; Zethof, J.; Gerats, T.; Schwarz-Sommer, Z.; Vandenbussche, M.: A conserved microRNA module exerts homeotic control over Petunia hybrida and Antirrhinum majus floral organ identity. Nature Genetics 39, doi:10.1038/ng2056, pp. 901 - 905 (2007)
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Chinchilla, D.; Zipfel, C.; Robatzek, S.; Kemmerling, B.; Nürnberger, T.; Jones, J. D. G.; Felix, G.; Boller, T.: A flagellin-induced complex of the receptor FLS2 and BAK1 initiates plant defence. Nature 448, pp. 497 - 500 (2007)
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Collins, N. C.; Niks, R. E.; Schulze-Lefert, P.: Resistance to cereal rusts at the plant cell wall—what can we learn from other host-pathogen systems? Australian Journal of Agricultural Research 58, pp. 476 - 489 (2007)
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Collins, S.; de Meaux, J.; Acquisti, C.: Adaptive walks toward a moving optimum. Genetics 176 (2), pp. 1089 - 1099 (2007)
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Corbesier, L.; Vincent, C.; Jang, S.; Fornara, F.; Fan, Q.; Searle, I.; Giakountis, A.; Farrona, S.; Gissot, L.; Turnbull, C. et al.; Coupland, G.: FT Protein Movement Contributes to Long-Distance Signaling in Floral Induction of Arabidopsis. Science 316, pp. 1030 - 1033 (2007)
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Ding, Z. J.; Doyle, M. R.; Amasino, R. M.; Davis, S. J.: A complex genetic interaction between Arabidopsis thaliana TOC1 and CCA1/LHY in driving the circadian clock and in output regulation. Genetics 176 (3), pp. 1501 - 1510 (2007)
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Ding, Z.; Millar, A. J.; Davis, A. M.; Davis, S. J.: TIME FOR COFFEE Encodes a Nuclear Regulator in the Arabidopsis thaliana Circadian Clock. Plant Cell 19, pp. 1522 - 1536 (2007)
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Dissmeyer, N.; ; Nowack, M. K.; Pusch, S.; Stals, H.; Inzé, D.; Grini, P. E.; Schnittger, A.: T-Loop Phosphorylation of Arabidopsis CDKA;1 Is Required for Its Function and Can Be Partially Substituted by an Aspartate Residue. Plant Cell 19, pp. 973 - 985 (2007)
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Domagalska, M. A.; Schomburg, F. M.; Amasino, R. M.; Vierstra, R. D.; Nagy, F.; Davis, S. J.: Attenuation of brassinosteroid signaling enhances FLC expression and delays flowering. Development 134 (15), pp. 2841 - 2850 (2007)
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Eulgem, T.; Somssich, I. E.: Networks of WRKY transcription factors in defense signaling. Current Opinion in Plant Biology 10, pp. 366 - 371 (2007)
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Farkas, I.; Dombrádi, V.; Miskei, M.; Szabados, L.; Koncz, C.: Arabidopsis PPP family of serine/threonine phosphatases. Trends in Plant Science 12 (4), pp. 169 - 176 (2007)
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Farrona, S.; Hurtado, L.; Reyes, J. C.: A nucleosome interaction module is required for normal function of Arabidopsis thaliana BRAHMA. Journal of Molecular Biology 373 (2), pp. 240 - 250 (2007)
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Franklin, G.; Conceicao, L. F. R.; Kombrink, E.; Dias, A.: Production of xanthones with antimicrobial and antioxidant activities by Hypericum perforatum L. cells. Planta Medica 73 (9), pp. 869 - 870 (2007)
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Freymark, G.; Diehl, T.; Miklis, M.; Romeis, T.; Panstruga, R.: Antagonistic Control of Powdery Mildew Host Cell Entry by Barley Calcium-Dependent Protein Kinases (CDPKs). Molecular Plant-Microbe Interactions 20 (10), pp. 1213 - 1221 (2007)
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Gandikota, M.; Birkenbihl, R.; Höhmann, S.; Cardon, G. H.; Saedler, H.; Huijser, P.: The miRNA156/157 recognition element in the 3' UTR of the Arabidopsis SBP box gene SPL3 prevents early flowering by translational inhibition in seedlings. Plant Journal 49 (4), pp. 683 - 693 (2007)
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Garzon, M.; Eifler, K.; Faust, A.; Scheel, H.; Hofmann, K.; Koncz, C.; Yephremov, A.; Bachmair, A.: PRT6/At5g02310 encodes an Arabidopsis ubiquitin ligase of the N-end rule pathway with arginine specificity and is not the CER3 locus. FEBS Letters 581 (17), pp. 3189 - 3196 (2007)
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Gebhardt, C.; Li, L.; Pajerowska-Mukhtar, K.; Achenbach, U.; Sattarzadeh, A.; Bormann, C.; Ilarionova, E.; Ballvora, A.: Candidate Gene Approach to Identify Genes Underlying Quantitative Traits and Develop Diagnostic Markers in Potato. Crop Science 47, pp. S 106 - S 111 (2007)
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Gebhardt, H.; Meniche, X.; Tropis, M.; Krämer, R.; Daffe, M.; Morbach, S.: The key role of the mycolic acid content in the functionality of the cell wall permeability barrier in Corynebacterineae. Microbiology 153, pp. 1424 - 1434 (2007)
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Gigolasahvili, T.; Yatusevich, R.; Berger, B.; Müller, C.; Flügge, U.-I.: The R2R3-MYB transcription factor HAG1/MYB28 is a regulator of methionine-derived glucosinolate biosynthesis in Arabidopsis thaliana. The Plant Journal 51, pp. 247 - 261 (2007)
Journal Article
Gigolashvili, T.; Berger, B.; Mock, H.-P.; Müller, C.; Weisshaar, B.; Flügge, U.-I.: The transcription factor HIG1/MYB51 regulates indolic glucosinolate biosynthesis in Arabidopsis thaliana. The Plant Journal 50, pp. 886 - 901 (2007)
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Gilroy, E. M.; Hein, I.; Van der Hoorn, R.; Boevink, P. C.; Venter, E.; McLellan, H.; Kaffarnik, F.; Hrubikova, K.; Shaw, J.; Holeva, M. et al.; Lopez, E. C.; Borras-Hidalgo, O.; Pritchard, L.; Loake, G. J.; Lacomme, C.; Birch, P. R. J.: Involvement of cathepsin B in the plant disease resistance hypersensitive response. Plant Journal 52 (1), pp. 1 - 13 (2007)
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Guo, P.; Baum, M.; Grando, S.; Ceccarelli, S.; Bai, G.; Li, R.; von Korff, M.; Varshney, R. K.; Graner, A.; Valkoun, V.: Differentially expressed genes between drought-tolerant and drought-sensitive barley genotypes in response to drought stress during the reproductive stage. Journal of Experimental Botany, doi:10.1093/jxb/erp194 (2007)
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Hahlbrock, K.: Tri-national workshop, warsaw, November 2006-introductory remarks. European Journal of Cell Biology 86 (9), p. 503 - 503 (2007)
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Hanssler, E.; Mueller, T.; Jessberger, N.; Volzke, A.; Plassmeier, J.; Kalinowski, J.; Kramer, R.; Burkovski, A.: FarR, a putative regulator of amino acid metabolism in Corynebacterium glutamicum. Applied Microbiology and Biotechnology 76 (3), pp. 625 - 632 (2007)
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Hayama, R.; Agashe, B.; Luley, E.; King, R.; Coupland, G.: A Circadian Rhythm Set by Dusk Determines the Expression of FT Homologs and the Short-Day Photoperiodic Flowering Response in Pharbitis. Plant Cell 19 (10), pp. 2988 - 3000 (2007)
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He, C.; Saedler, H.: Molecular evolution of a morphological novelty in Solanaceae, the Inflated-Calyx-Syndrome (ICS) in Physalis. VI International Solanaceae Conference: Genomics Meets Biodiversity, pp. 171 - 181 (2007)
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He, C.; Saedler, H.: Hormonal control of the inflated calyx syndrome, a morphological novelty, in Physalis. Plant Journal 49, pp. 935 - 946 (2007)
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He, C.; Sommer, H.; Grosardt, B.; Huijser, P.; Saedler, H.: PFMAGO, a MAGO NASHI-like Factor, Interacts with the MADS-Domain Protein MPF2 from Physalis floridana. Molecular Biology and Evolution 24 (5), doi:10.1093/molbev/msm041, pp. 1229 - 1241 (2007)
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Hoi, J. W. S.; Herbert, C.; Bacha, N.; O'Connell, R.; Lafitte, C.; Borderies, G.; Rossignol, M.; Rouge, P.; Dumas, B.: Regulation and role of a STE12-like transcription factor from the plant pathogen Colletotrichum lindemuthianum. Molecular Microbiology 64 (1), pp. 68 - 82 (2007)
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Hu, J. Y.; Saedler, H.: Evolution of the inflated calyx syndrome in solanaceae. Molecular Biology and Evolution 24 (11), pp. 2443 - 2453 (2007)
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Ihnatowicz, A.; Pesaresi, P.; Leister, D.: The E subunit of photosystem I is not essential for linear electron flow and photoautotrophic growth in Arabidopsis thaliana. Planta 226, pp. 889 - 895 (2007)
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Kaschani, F.; Van der Hoorn, R.: Small molecule approaches in plants. Current Opinion in Chemical Biology 11 (1), pp. 88 - 98 (2007)
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Kaschani, F.; Van der Hoorn, R.: Anwendung von activity-based proteomics zur Analyse von Pflanzen-Pathogen Interaktionen. Max Planck Society Yearbook 2007, pp. 625 - 629 (2007)
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Kemmerling, B.; Schwedt, A.; Rodriguez, P.; Mazzotta, S.; Frank, M.; Qamar, S. A.; Mengiste, T.; Betsuyaku, S.; Parker, J. E.; Müssig, C. et al.; Thomma, B. P. H. J.; Albrecht, C.; de Vries, S. C.; Hirt, H.; Nürnberger, T.: The BRI1-Associated Kinase 1, BAK1, Has a Brassinolide-Independent Role in Plant Cell-Death Control. Current Biology 17, pp. 1116 - 1122 (2007)
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Keurentjes, J. J. B.; Bentsink, L.; Alonso-Blanco, C.; Hanhart, C. J.; Blankestijn-De Vries, H.; Effgen, S.; Vreugdenhil, D.; Koornneef, M.: Development of a Near-Isogenic Line Population of Arabidopsis thaliana and Comparison of Mapping Power With a Recombinant Inbred Line Population. Genetics 175, pp. 891 - 905 (2007)
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Keurentjes, J. J. B.; Fu, J. Y.; Terpstra, I. R.; Garcia, J. M.; Van den Ackerveken, G.; Snoek, L. B.; Peeters, A. J. M.; Vreugdenhil, D.; Koornneef, M.; Jansen, R. C.: Regulatory network construction in Arabidopsis by using genome-wide gene expression quantitative trait loci. Proceedings of the National Society of Sciences of United States of America 104 (5), pp. 1708 - 1713 (2007)
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Kevei, E.; Gyula, P.; Feher, B.; Toth, R.; Viczian, A.; Kircher, S.; Rea, D.; Dorjgotov, D.; Schafer, E.; Millar, A. J. et al.; Kozma-Bognar, L.; Nagy, F.: Arabidopsis thaliana circadian clock is regulated by the small GTPase LIP1. Current Biology 17 (17), pp. 1456 - 1464 (2007)
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Kilian, B.; Oezkan, H.; Deusch, O.; Effgen, S.; Brandolini, A.; Kohl, J.; Martin, W.; Salamini, F.: Independent Wheat B and G Genome Origins in Outcrossing Aegilops Progenitor Haplotypes. Molecular Biology and Evolution 24 (1), doi:10.1093/molbev/msl151, pp. 217 - 227 (2007)
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Kilian, B.; Oezkan, H.; Walther, A.; Kohl, J.; Dagan, T.; Salamini, F.; Martin, W.: Molecular Diversity at 18 Loci in 321 Wild and 92 Domesticate Lines Reveal No Reduction of Nucleotide Diversity during Triticum monococcum (Einkorn) Domestication: Implications for the Origin of Agriculture. Molecular Biology and Evolution 24 (12), pp. 2657 - 2668 (2007)
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Kinoshita, Y.; Saze, H.; Kinoshita, T.; Miura, A.; Soppe, W. J.; Koornneef, M.; Kakutani, T.: Control of FWA gene silencing in Arabidopsis thaliana by SINE-related direct repeats. Plant Journal 49 (1), doi:10.1111/j.1365-313X.2006.02936., pp. 38 - 45 (2007)
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